Published in Extremophiles on April 03, 2011
Exo-metabolome of Pseudovibrio sp. FO-BEG1 analyzed by ultra-high resolution mass spectrometry and the effect of phosphate limitation. PLoS One (2014) 1.03
Mass spectrometry-based metabolomics to elucidate functions in marine organisms and ecosystems. Mar Drugs (2012) 0.86
High metabolomic microdiversity within co-occurring isolates of the extremely halophilic bacterium Salinibacter ruber. PLoS One (2013) 0.84
Metabolomics Analysis Reveals the Participation of Efflux Pumps and Ornithine in the Response of Pseudomonas putida DOT-T1E Cells to Challenge with Propranolol. PLoS One (2016) 0.79
Metabolic analysis of the response of Pseudomonas putida DOT-T1E strains to toluene using Fourier transform infrared spectroscopy and gas chromatography mass spectrometry. Metabolomics (2016) 0.76
Metabolic Fingerprinting of Pseudomonas putida DOT-T1E Strains: Understanding the Influence of Divalent Cations in Adaptation Mechanisms Following Exposure to Toluene. Metabolites (2016) 0.75
KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res (2000) 117.00
Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut. Proc Natl Acad Sci U S A (2007) 2.79
The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea. Proc Natl Acad Sci U S A (2005) 2.43
Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds. Int J Syst Evol Microbiol (2002) 2.29
MassTRIX: mass translator into pathways. Nucleic Acids Res (2008) 2.05
Extremely halophilic bacteria in crystallizer ponds from solar salterns. Appl Environ Microbiol (2000) 2.01
Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds. Environ Microbiol (1999) 1.74
Effect of selected environmental and physico-chemical factors on bacterial cytoplasmic membranes. J Microbiol Methods (2003) 1.67
Molecular inroads into the regulation and metabolism of fatty acids, lessons from bacteria. Prog Lipid Res (1999) 1.50
Microbial metabolomics: past, present and future methodologies. Biotechnol Lett (2006) 1.40
Chemometric contributions to the evolution of metabonomics: mathematical solutions to characterising and interpreting complex biological NMR spectra. Analyst (2002) 1.33
Metabolic evidence for biogeographic isolation of the extremophilic bacterium Salinibacter ruber. ISME J (2008) 1.26
Effect of temperature and salinity stress on growth and lipid composition of Shewanella gelidimarina. Appl Environ Microbiol (2000) 1.20
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J (2010) 1.17
High-precision frequency measurements: indispensable tools at the core of the molecular-level analysis of complex systems. Anal Bioanal Chem (2007) 1.10
Separation and mass spectrometry in microbial metabolomics. Curr Opin Microbiol (2008) 1.00
Recovery in culture of viable but nonculturable Vibrio parahaemolyticus: regrowth or resuscitation? ISME J (2007) 0.94
Distribution, abundance and diversity of the extremely halophilic bacterium Salinibacter ruber. Saline Systems (2008) 0.93
Effect of low temperatures on growth, structure, and metabolism of Campylobacter coli SP10. Appl Environ Microbiol (1998) 0.89
Dynamic regulation of N-acyl-homoserine lactone production and degradation in Pseudomonas putida IsoF. FEMS Microbiol Ecol (2010) 0.87
In vivo dynamics of glycolysis in Escherichia coli shows need for growth-rate dependent metabolome analysis. Biotechnol Prog (2009) 0.85
Structural changes in the cells of some bacteria during population growth: a Fourier transform infrared-attenuated total reflectance study. Appl Spectrosc (2004) 0.84
Characterization of polar membrane lipids of the extremely halophilic bacterium Salinibacter ruber and possible role of cardiolipin. Biochim Biophys Acta (2008) 0.82
Gas chromatographic metabolic profiling: a sensitive tool for functional microbial ecology. J Microbiol Methods (2008) 0.79
Development and application of a method for the analysis of N-acylhomoserine lactones by solid-phase extraction and ultra high pressure liquid chromatography. J Chromatogr A (2006) 0.78
A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes. Gastroenterology (2010) 5.29
Metabolomics reveals metabolic biomarkers of Crohn's disease. PLoS One (2009) 2.35
Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern. Environ Microbiol (2002) 2.10
MassTRIX: mass translator into pathways. Nucleic Acids Res (2008) 2.05
Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna. Science (2005) 1.90
Naturally occurring human urinary peptides for use in diagnosis of chronic kidney disease. Mol Cell Proteomics (2010) 1.90
The dynamic range of the human metabolome revealed by challenges. FASEB J (2012) 1.61
CE-MS analysis of the human urinary proteome for biomarker discovery and disease diagnostics. Proteomics Clin Appl (2008) 1.57
Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes. Appl Environ Microbiol (2006) 1.49
The dosage of small volumes for chromatographic quantifications using a drop-on-demand dispenser system. Anal Bioanal Chem (2007) 1.41
Response of Arabidopsis thaliana to N-hexanoyl-DL-homoserine-lactone, a bacterial quorum sensing molecule produced in the rhizosphere. Planta (2008) 1.35
Reclassification of Rhodobium marinum and Rhodobium pfennigii as Afifella marina gen. nov. comb. nov. and Afifella pfennigii comb. nov., a new genus of photoheterotrophic Alphaproteobacteria and emended descriptions of Rhodobium, Rhodobium orientis and Rhodobium gokarnense. Syst Appl Microbiol (2008) 1.32
Metabolic evidence for biogeographic isolation of the extremophilic bacterium Salinibacter ruber. ISME J (2008) 1.26
Physical heterogeneity increases biofilm resource use and its molecular diversity in stream mesocosms. PLoS One (2010) 1.25
Preanalytical aspects and sample quality assessment in metabolomics studies of human blood. Clin Chem (2013) 1.24
Metabonomic fingerprints of fasting plasma and spot urine reveal human pre-diabetic metabolic traits. Metabolomics (2010) 1.24
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J (2010) 1.17
Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey. FEMS Microbiol Ecol (2008) 1.15
The Arabidopsis glucosyltransferase UGT76B1 conjugates isoleucic acid and modulates plant defense and senescence. Plant Cell (2011) 1.13
Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses. PLoS One (2012) 1.10
The chemodiversity of wines can reveal a metabologeography expression of cooperage oak wood. Proc Natl Acad Sci U S A (2009) 1.09
Comparison of prokaryotic diversity at offshore oceanic locations reveals a different microbiota in the Mediterranean Sea. FEMS Microbiol Ecol (2006) 1.09
Unraveling different chemical fingerprints between a champagne wine and its aerosols. Proc Natl Acad Sci U S A (2009) 1.07
MassTRIX reloaded: combined analysis and visualization of transcriptome and metabolome data. PLoS One (2012) 1.06
Pathway analysis of the transcriptome and metabolome of salt sensitive and tolerant poplar species reveals evolutionary adaption of stress tolerance mechanisms. BMC Plant Biol (2010) 1.03
Uptake, degradation and chiral discrimination of N-acyl-D/L-homoserine lactones by barley (Hordeum vulgare) and yam bean (Pachyrhizus erosus) plants. Anal Bioanal Chem (2007) 1.02
Functions of carotenoids in xanthorhodopsin and archaerhodopsin, from action spectra of photoinhibition of cell respiration. Biochim Biophys Acta (2006) 1.02
The metavirome of a hypersaline environment. Environ Microbiol (2010) 1.02
Microbial community associated with the colonial ascidian Cystodytes dellechiajei. Environ Microbiol (2007) 1.01
Intraspecific comparative analysis of the species Salinibacter ruber. Extremophiles (2005) 1.00
Automated label-free quantification of metabolites from liquid chromatography-mass spectrometry data. Mol Cell Proteomics (2013) 0.98
Substrate uptake in extremely halophilic microbial communities revealed by microautoradiography and fluorescence in situ hybridization. Extremophiles (2003) 0.97
Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation. ISME J (2012) 0.96
Metagenomic approach to the study of halophages: the environmental halophage 1. Environ Microbiol (2007) 0.95
Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D. Microbiology (2005) 0.95
Serum 27-nor-5β-cholestane-3,7,12,24,25 pentol glucuronide discovered by metabolomics as potential diagnostic biomarker for epithelium ovarian cancer. J Proteome Res (2011) 0.95
GC/MS-based metabolomics reveals fatty acid biosynthesis and cholesterol metabolism in cell lines infected with influenza A virus. Talanta (2010) 0.95
Variations of DOM quality in inflows of a drinking water reservoir: linking of van Krevelen diagrams with EEMF spectra by rank correlation. Environ Sci Technol (2012) 0.95
Distribution, abundance and diversity of the extremely halophilic bacterium Salinibacter ruber. Saline Systems (2008) 0.93
Pollen metabolome analysis reveals adenosine as a major regulator of dendritic cell-primed T(H) cell responses. J Allergy Clin Immunol (2011) 0.92
Bacterial diversity in dry modern freshwater stromatolites from Ruidera Pools Natural Park, Spain. Syst Appl Microbiol (2010) 0.92
Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain). Microb Ecol (2011) 0.91
Insulin sensitivity is reflected by characteristic metabolic fingerprints--a Fourier transform mass spectrometric non-targeted metabolomics approach. PLoS One (2010) 0.90
Epibiosis of oxygenic phototrophs containing chlorophylls a, b, c, and d on the colonial ascidian Cystodytes dellechiajei. Microb Ecol (2010) 0.90
Extremely halophilic microbial communities in anaerobic sediments from a solar saltern. Environ Microbiol Rep (2009) 0.90
Metatranscriptomic analysis of extremely halophilic viral communities. ISME J (2011) 0.90
Exploration of intraclonal adaptation mechanisms of Pseudomonas brassicacearum facing cadmium toxicity. Environ Microbiol (2007) 0.89
Mass spectrometric stereoisomeric differentiation between α- and β-ascorbic acid 2-O-glucosides. Experimental and density functional theory study. Rapid Commun Mass Spectrom (2011) 0.89
Liquid chromatography-mass spectrometry in metabolomics research: mass analyzers in ultra high pressure liquid chromatography coupling. J Chromatogr A (2013) 0.89
Phylogenetic position of Salinibacter ruber based on concatenated protein alignments. Syst Appl Microbiol (2006) 0.89
RNAi-mediated suppression of isoprene emission in poplar transiently impacts phenolic metabolism under high temperature and high light intensities: a transcriptomic and metabolomic analysis. Plant Mol Biol (2010) 0.88
Dynamic regulation of N-acyl-homoserine lactone production and degradation in Pseudomonas putida IsoF. FEMS Microbiol Ecol (2010) 0.87
Ammonia-oxidizing Crenarchaeota and nitrification inside the tissue of a colonial ascidian. Environ Microbiol (2008) 0.87
Identification of bacterial N-acylhomoserine lactones (AHLs) with a combination of ultra-performance liquid chromatography (UPLC), ultra-high-resolution mass spectrometry, and in-situ biosensors. Anal Bioanal Chem (2006) 0.87
Phenotypic switching in Pseudomonas brassicacearum involves GacS- and GacA-dependent Rsm small RNAs. Appl Environ Microbiol (2012) 0.87
Attachment of chloride anion to sugars: mechanistic investigation and discovery of a new dopant for efficient sugar ionization/detection in mass spectrometers. Chemistry (2012) 0.87
Exploring the Arabidopsis sulfur metabolome. Plant J (2013) 0.86
Molecular cartography in acute Chlamydia pneumoniae infections--a non-targeted metabolomics approach. Anal Bioanal Chem (2013) 0.86
Metabolic influence of Botrytis cinerea infection in champagne base wine. J Agric Food Chem (2011) 0.86
UV-B mediated metabolic rearrangements in poplar revealed by non-targeted metabolomics. Plant Cell Environ (2014) 0.85
Peptidomic analysis of rat urine using capillary electrophoresis coupled to mass spectrometry. Proteomics Clin Appl (2007) 0.85
Culture-independent approaches for studying viruses from hypersaline environments. Appl Environ Microbiol (2012) 0.85
Salicola marasensis gen. nov., sp. nov., an extremely halophilic bacterium isolated from the Maras solar salterns in Peru. Int J Syst Evol Microbiol (2006) 0.85
High-resolution metabolite imaging of light and dark treated retina using MALDI-FTICR mass spectrometry. Proteomics (2014) 0.85
Evaluation of glycoalkaloids in tubers of genetically modified virus Y-resistant potato plants (var. Désirée) by non-aqueous capillary electrophoresis coupled with electrospray ionization mass spectrometry (NACE-ESI-MS). Anal Bioanal Chem (2003) 0.84
High metabolomic microdiversity within co-occurring isolates of the extremely halophilic bacterium Salinibacter ruber. PLoS One (2013) 0.84
Expressing forest origins in the chemical composition of cooperage oak woods and corresponding wines by using FTICR-MS. Chemistry (2009) 0.84
Quorum sensing inhibition by Asparagopsis taxiformis, a marine macro alga: separation of the compound that interrupts bacterial communication. Mar Drugs (2013) 0.84
DI-ICR-FT-MS-based high-throughput deep metabotyping: a case study of the Caenorhabditis elegans-Pseudomonas aeruginosa infection model. Anal Bioanal Chem (2014) 0.83
Diversity of bacteria and Archaea in sulphate-reducing enrichment cultures inoculated from serial dilution of Zostera noltii rhizosphere samples. Environ Microbiol (2003) 0.83
Occurrence of Halococcus spp. in the nostrils salt glands of the seabird Calonectris diomedea. Extremophiles (2009) 0.83
Analysis of N-acylhomoserine lactones after alkaline hydrolysis and anion-exchange solid-phase extraction by capillary zone electrophoresis-mass spectrometry. Electrophoresis (2005) 0.83
Response of sulfate-reducing bacteria to an artificial oil-spill in a coastal marine sediment. Environ Microbiol (2011) 0.83
Analysis of N-acyl-L-homoserine lactones produced by Burkholderia cepacia with partial filling micellar electrokinetic chromatography--electrospray ionization-ion trap mass spectrometry. Electrophoresis (2003) 0.83
In situ synthesis of magnetic multiwalled carbon nanotube composites for the clean-up of (fluoro)quinolones from human plasma prior to ultrahigh pressure liquid chromatography analysis. Anal Chem (2010) 0.83
Increasing atmospheric CO2 reduces metabolic and physiological differences between isoprene- and non-isoprene-emitting poplars. New Phytol (2013) 0.82
Design of quinonoid-enriched humic materials with enhanced redox properties. Environ Sci Technol (2005) 0.82
The hydrolysis of unsubstituted N-acylhomoserine lactones to their homoserine metabolites. Analytical approaches using ultra performance liquid chromatography. J Chromatogr A (2007) 0.82
Mechanisms of humic acids degradation by white rot fungi explored using 1H NMR spectroscopy and FTICR mass spectrometry. Environ Sci Technol (2011) 0.82
Metabolic features of Protochlamydia amoebophila elementary bodies--a link between activity and infectivity in Chlamydiae. PLoS Pathog (2013) 0.82
Metabolomics of transgenic maize combining Fourier transform-ion cyclotron resonance-mass spectrometry, capillary electrophoresis-mass spectrometry and pressurized liquid extraction. J Chromatogr A (2009) 0.82