PubRank

Xuhui Huang

Author PubWeight™ 40.16‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Hydrophobic collapse in multidomain protein folding. Science 2004 2.94
2 Observation of a dewetting transition in the collapse of the melittin tetramer. Nature 2005 2.93
3 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science 2009 2.68
4 Using generalized ensemble simulations and Markov state models to identify conformational states. Methods 2009 2.60
5 Structural insight into RNA hairpin folding intermediates. J Am Chem Soc 2008 1.39
6 X-ray structure and mechanism of RNA polymerase II stalled at an antineoplastic monofunctional platinum-DNA adduct. Proc Natl Acad Sci U S A 2010 1.39
7 A role for both conformational selection and induced fit in ligand binding by the LAO protein. PLoS Comput Biol 2011 1.35
8 The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation. J Mol Biol 2009 1.24
9 Nanoscale dewetting transition in protein complex folding. J Phys Chem B 2007 1.22
10 Dynamics of pyrophosphate ion release and its coupled trigger loop motion from closed to open state in RNA polymerase II. J Am Chem Soc 2012 1.20
11 Hydrophobic aided replica exchange: an efficient algorithm for protein folding in explicit solvent. J Phys Chem B 2006 1.20
12 Initiation complex structure and promoter proofreading. Science 2011 1.13
13 Topological methods for exploring low-density states in biomolecular folding pathways. J Chem Phys 2009 1.10
14 Dewetting transitions in protein cavities. Proteins 2010 1.08
15 Network models for molecular kinetics and their initial applications to human health. Cell Res 2010 1.06
16 Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation. RNA 2011 1.01
17 Dynamics of water confined in the interdomain region of a multidomain protein. J Phys Chem B 2006 0.97
18 Dynamics of an intrinsically disordered protein reveal metastable conformations that potentially seed aggregation. J Am Chem Soc 2013 0.96
19 Chaotic motifs in gene regulatory networks. PLoS One 2012 0.93
20 Simulating the T-jump-triggered unfolding dynamics of trpzip2 peptide and its time-resolved IR and two-dimensional IR signals using the Markov state model approach. J Phys Chem B 2011 0.91
21 A two-state model for the dynamics of the pyrophosphate ion release in bacterial RNA polymerase. PLoS Comput Biol 2013 0.90
22 A tetraphenylethylene core-based 3D structure small molecular acceptor enabling efficient non-fullerene organic solar cells. Adv Mater 2014 0.86
23 Monitoring and inhibition of insulin fibrillation by a small organic fluorogen with aggregation-induced emission characteristics. J Am Chem Soc 2012 0.86
24 Multiscale modeling of macromolecular biosystems. Brief Bioinform 2012 0.84
25 Hierarchical Nyström methods for constructing Markov state models for conformational dynamics. J Chem Phys 2013 0.83
26 A fast parallel clustering algorithm for molecular simulation trajectories. J Comput Chem 2012 0.83
27 Quantitative comparison of alternative methods for coarse-graining biological networks. J Chem Phys 2013 0.81
28 Curative effect of Dingqi analgesic patch on cancer pain: a single-blind randomized controlled trail. J Tradit Chin Med 2013 0.79
29 Constructing kinetic models to elucidate structural dynamics of a complete RNA polymerase II elongation cycle. Phys Biol 2014 0.79
30 Long-period rhythmic synchronous firing in a scale-free network. Proc Natl Acad Sci U S A 2013 0.79
31 Investigating the structural origin of trpzip2 temperature dependent unfolding fluorescence line shape based on a Markov state model simulation. J Phys Chem B 2012 0.79
32 Application of Markov State Models to simulate long timescale dynamics of biological macromolecules. Adv Exp Med Biol 2014 0.78
33 Force field development for cofactors in the photosystem II. J Comput Chem 2012 0.77
34 A Flexible Domain-Domain Hinge Promotes an Induced-fit Dominant Mechanism for the Loading of Guide-DNA into Argonaute Protein in Thermus thermophilus. J Phys Chem B 2016 0.76
35 Screening and identification of functional Lactobacillus specific for vegetable fermentation. J Food Sci 2012 0.75
36 A multi-feature based morphological algorithm for ST shape classification. Conf Proc IEEE Eng Med Biol Soc 2015 0.75
37 Molecular dynamics study of the temperature-dependent Optical Kerr effect spectra and intermolecular dynamics of room temperature ionic liquid 1-methoxyethylpyridinium dicyanoamide. J Phys Chem B 2008 0.75
38 Why do simple molecules with "isolated" phenyl rings emit visible light? J Am Chem Soc 2017 0.75
39 Elucidating dominant pathways of the nano-particle self-assembly process. Phys Chem Chem Phys 2016 0.75
40 Controlling the Integration of Polyvinylpyrrolidone onto Substrate by Quartz Crystal Microbalance with Dissipation To Achieve Excellent Protein Resistance and Detoxification. ACS Appl Mater Interfaces 2016 0.75