PubRank

Peter Roepstorff

Author PubWeight™ 157.20‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 IntAct: an open source molecular interaction database. Nucleic Acids Res 2004 15.02
2 Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Res 2003 14.79
3 Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns. Mol Cell Proteomics 2005 6.34
4 A systematic approach to modeling, capturing, and disseminating proteomics experimental data. Nat Biotechnol 2003 3.57
5 Celiac lesion T cells recognize epitopes that cluster in regions of gliadins rich in proline residues. Gastroenterology 2002 2.95
6 Bacterial mitosis: ParM of plasmid R1 moves plasmid DNA by an actin-like insertional polymerization mechanism. Mol Cell 2003 2.60
7 Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. Plant Cell 2002 2.48
8 Intramolecular migration of amide hydrogens in protonated peptides upon collisional activation. J Am Chem Soc 2005 1.77
9 A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation. J Proteome Res 2004 1.65
10 A proteomic approach for identification of secreted proteins during the differentiation of 3T3-L1 preadipocytes to adipocytes. Mol Cell Proteomics 2002 1.61
11 Molecular identification of the insect adipokinetic hormone receptors. Proc Natl Acad Sci U S A 2002 1.49
12 Functional conservation of subfamilies of putative UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferases in Drosophila, Caenorhabditis elegans, and mammals. One subfamily composed of l(2)35Aa is essential in Drosophila. J Biol Chem 2002 1.44
13 The molecular basis for oat intolerance in patients with celiac disease. PLoS Med 2004 1.40
14 Proteome reference maps of the Lotus japonicus nodule and root. Proteomics 2014 1.39
15 Shootin1: A protein involved in the organization of an asymmetric signal for neuronal polarization. J Cell Biol 2006 1.36
16 Legume receptors perceive the rhizobial lipochitin oligosaccharide signal molecules by direct binding. Proc Natl Acad Sci U S A 2012 1.30
17 Proteome analysis reveals phosphorylation of ATP synthase beta -subunit in human skeletal muscle and proteins with potential roles in type 2 diabetes. J Biol Chem 2003 1.28
18 Proteomic analysis of S-nitrosylated proteins in Arabidopsis thaliana undergoing hypersensitive response. Proteomics 2008 1.26
19 Comparative proteome analysis of Chlamydia trachomatis serovar A, D and L2. Proteomics 2002 1.25
20 Proteome analysis of grain filling and seed maturation in barley. Plant Physiol 2002 1.24
21 Mapping temperature-induced conformational changes in the Escherichia coli heat shock transcription factor sigma 32 by amide hydrogen exchange. J Biol Chem 2003 1.23
22 Nanodiscs for immobilization of lipid bilayers and membrane receptors: kinetic analysis of cholera toxin binding to a glycolipid receptor. Anal Chem 2008 1.19
23 Characterization of a secreted Chlamydia protease. Cell Microbiol 2002 1.16
24 Molecular characterization of covalent complexes between tissue transglutaminase and gliadin peptides. J Biol Chem 2004 1.15
25 Improved detection of hydrophilic phosphopeptides using graphite powder microcolumns and mass spectrometry: evidence for in vivo doubly phosphorylated dynamin I and dynamin III. Mol Cell Proteomics 2004 1.13
26 Secretion of Cpn0796 from Chlamydia pneumoniae into the host cell cytoplasm by an autotransporter mechanism. Cell Microbiol 2005 1.13
27 Genetic and proteomic evidences support the localization of yeast enolase in the cell surface. Proteomics 2006 1.10
28 Characterization of gel-separated glycoproteins using two-step proteolytic digestion combined with sequential microcolumns and mass spectrometry. Mol Cell Proteomics 2004 1.09
29 An enzymatic deglycosylation scheme enabling identification of core fucosylated N-glycans and O-glycosylation site mapping of human plasma proteins. J Proteome Res 2007 1.07
30 Leaf-cutting ant fungi produce cell wall degrading pectinase complexes reminiscent of phytopathogenic fungi. BMC Biol 2010 1.07
31 Up-regulated proteins in the fluid bathing the tumour cell microenvironment as potential serological markers for early detection of cancer of the breast. Mol Oncol 2009 1.07
32 Protein modification and replicative senescence of WI-38 human embryonic fibroblasts. Aging Cell 2010 1.06
33 Proteome profiling of Populus euphratica Oliv. upon heat stress. Ann Bot 2006 1.05
34 Laccase detoxification mediates the nutritional alliance between leaf-cutting ants and fungus-garden symbionts. Proc Natl Acad Sci U S A 2012 1.05
35 Catalase and NO CATALASE ACTIVITY1 promote autophagy-dependent cell death in Arabidopsis. Plant Cell 2013 1.01
36 Dynamics of urokinase receptor interaction with Peptide antagonists studied by amide hydrogen exchange and mass spectrometry. Biochemistry 2004 1.01
37 The binding site for regulatory 14-3-3 protein in plant plasma membrane H+-ATPase: involvement of a region promoting phosphorylation-independent interaction in addition to the phosphorylation-dependent C-terminal end. J Biol Chem 2003 1.00
38 Quantitative proteomics identifies Gemin5, a scaffolding protein involved in ribonucleoprotein assembly, as a novel partner for eukaryotic initiation factor 4E. J Proteome Res 2006 0.99
39 Highly Efficient Phosphopeptide Enrichment by Calcium Phosphate Precipitation Combined with Subsequent IMAC Enrichment. Mol Cell Proteomics 2007 0.98
40 Graphite powder as an alternative or supplement to reversed-phase material for desalting and concentration of peptide mixtures prior to matrix-assisted laser desorption/ionization-mass spectrometry. Proteomics 2002 0.96
41 Role of TGF-beta1-independent changes in protein neosynthesis, p38alphaMAPK, and cdc42 in hydrogen peroxide-induced senescence-like morphogenesis. Free Radic Biol Med 2008 0.96
42 Acyl-CoA-binding protein, Acb1p, is required for normal vacuole function and ceramide synthesis in Saccharomyces cerevisiae. Biochem J 2004 0.96
43 An improved method of sample preparation on AnchorChip targets for MALDI-MS and MS/MS and its application in the liver proteome project. Proteomics 2007 0.96
44 Postmortem proteome changes of porcine muscle related to tenderness. J Agric Food Chem 2003 0.96
45 Identification of novel oxidized protein substrates and physiological partners of the mitochondrial ATP-dependent Lon-like protease Pim1. J Biol Chem 2010 0.95
46 Using optimized collision energies and high resolution, high accuracy fragment ion selection to improve glycopeptide detection by precursor ion scanning. J Am Soc Mass Spectrom 2003 0.95
47 2D gels still have a niche in proteomics. J Proteomics 2013 0.94
48 Proteome analysis of the purine stimulon from Lactococcus lactis. Proteomics 2003 0.94
49 Specific characterization of substrate and inhibitor binding sites of a glycosyl hydrolase family 11 xylanase from Aspergillus niger. J Biol Chem 2002 0.94
50 Time-resolved quantitative phosphoproteomics: new insights into Angiotensin-(1-7) signaling networks in human endothelial cells. J Proteome Res 2012 0.94
51 Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry. Proteomics 2008 0.94
52 Novel gamma-carboxyglutamic acid-containing peptides from the venom of Conus textile. FEBS J 2006 0.93
53 Proteome analysis of brown spider venom: identification of loxnecrogin isoforms in Loxosceles gaucho venom. Proteomics 2005 0.92
54 Identification of protein degradation during post-mortem storage of pig meat. J Agric Food Chem 2002 0.92
55 Unfolding, aggregation, and seeded amyloid formation of lysine-58-cleaved beta 2-microglobulin. Biochemistry 2005 0.91
56 Performance of isobaric and isotopic labeling in quantitative plant proteomics. J Proteome Res 2012 0.91
57 Precursors of novel Gla-containing conotoxins contain a carboxy-terminal recognition site that directs gamma-carboxylation. Biochemistry 2005 0.91
58 Oxidative stress-induced proteome alterations target different cellular pathways in human myoblasts. Free Radic Biol Med 2011 0.91
59 New insights into the rat spermatogonial proteome: identification of 156 additional proteins. Mol Cell Proteomics 2003 0.90
60 Down-regulation of the strawberry Bet v 1-homologous allergen in concert with the flavonoid biosynthesis pathway in colorless strawberry mutant. Proteomics 2006 0.90
61 Tissue distribution, intracellular localization and proteolytic processing of rat 4-hydroxyphenylpyruvate dioxygenase. Cell Biol Int 2003 0.90
62 Rapid desalting of protein samples for on-line microflow electrospray ionization mass spectrometry. Anal Biochem 2004 0.89
63 Combination of two matrices results in improved performance of MALDI MS for peptide mass mapping and protein analysis. J Am Soc Mass Spectrom 2003 0.89
64 Identification of 30 protein species involved in replicative senescence and stress-induced premature senescence. FEBS Lett 2002 0.89
65 Retracted A proteomic approach for investigation of photosynthetic apparatus in plants. Proteomics 2005 0.88
66 UDP-glucose pyrophosphorylase is upregulated in carriers of the porcine RN- mutation in the AMP-activated protein kinase. Proteomics 2004 0.87
67 Immune-mediated beta-cell destruction in vitro and in vivo-A pivotal role for galectin-3. Biochem Biophys Res Commun 2006 0.87
68 Structural and immunological characterization of the N-glycans from the major yellow jacket allergen Ves v 2: the N-glycan structures are needed for the human antibody recognition. Mol Immunol 2009 0.87
69 Ion-pairing reversed-phased chromatography/mass spectrometry of heparin. Carbohydr Res 2005 0.87
70 The extensible alloscutal cuticle of the tick, Ixodes ricinus. Insect Biochem Mol Biol 2005 0.87
71 Hydrogen/deuterium exchange mass spectrometry reveals specific changes in the local flexibility of plasminogen activator inhibitor 1 upon binding to the somatomedin B domain of vitronectin. Biochemistry 2012 0.86
72 Hydrogen atom scrambling in selectively labeled anionic peptides upon collisional activation by MALDI tandem time-of-flight mass spectrometry. J Am Soc Mass Spectrom 2008 0.86
73 Screening for enzyme inhibitors by surface plasmon resonance combined with mass spectrometry. Anal Chem 2004 0.86
74 Spatio-temporal changes in germination and radical elongation of barley seeds tracked by proteome analysis of dissected embryo, aleurone layer, and endosperm tissues. Proteomics 2007 0.86
75 Insulin-like growth factor binding protein-6 delays replicative senescence of human fibroblasts. Mech Ageing Dev 2011 0.86
76 Proteome analysis of barley seeds: Identification of major proteins from two-dimensional gels (pI 4-7). Proteomics 2004 0.85
77 Initial proteome analysis of mature barley seeds and malt. Proteomics 2002 0.85
78 Mammalian peptidylglycine alpha-amidating monooxygenase mRNA expression can be modulated by the La autoantigen. Mol Cell Biol 2005 0.84
79 Nanodisc-based co-immunoprecipitation for mass spectrometric identification of membrane-interacting proteins. Mol Cell Proteomics 2011 0.84
80 Integrating proteomic and functional genomic technologies in discovery-driven translational breast cancer research. Mol Cell Proteomics 2003 0.84
81 Proteome analysis of a Lactococcus lactis strain overexpressing gapA suggests that the gene product is an auxiliary glyceraldehyde 3-phosphate dehydrogenase. Proteomics 2002 0.84
82 Mass spectrometric analysis of protein interactions. Curr Opin Chem Biol 2005 0.83
83 Differentiation of isomeric oligosaccharide structures by ESI tandem MS and GC-MS. Carbohydr Res 2004 0.82
84 Global proteome changes in larvae of Callosobruchus maculatus Coleoptera:Chrysomelidae:Bruchinae) following ingestion of a cysteine proteinase inhibitor. Proteomics 2012 0.82
85 Nitration of soluble proteins in organotypic culture models of Parkinson's disease. Neurochem Int 2007 0.82
86 Cleaved beta 2-microglobulin partially attains a conformation that has amyloidogenic features. J Biol Chem 2002 0.81
87 Proteomic profile of the nucellus of castor bean (Ricinus communis L.) seeds during development. J Proteomics 2012 0.81
88 Proteomic analysis of day-night variations in protein levels in the rat pineal gland. Proteomics 2007 0.81
89 Identification of a peptide from alpha-gliadin resistant to digestive enzymes: implications for celiac disease. J Chromatogr B Analyt Technol Biomed Life Sci 2007 0.81
90 Proteome analysis of pod and seed development in the model legume Lotus japonicus. J Proteome Res 2010 0.81
91 Comprehensive proteomic analysis of Trypanosoma cruzi epimastigote cell surface proteins by two complementary methods. J Proteome Res 2013 0.81
92 Spatio-temporal profiling and degradation of alpha-amylase isozymes during barley seed germination. FEBS J 2007 0.80
93 CYP1A-immunopositive proteins in bivalves identified as cytoskeletal and major vault proteins. Aquat Toxicol 2006 0.80
94 Identification and characterization of a novel Chlamydia trachomatis reticulate body protein. FEMS Microbiol Lett 2002 0.80
95 Identification of nitrotyrosine containing peptides using combined fractional diagonal chromatography (COFRADIC) and off-line nano-LC-MALDI. J Am Soc Mass Spectrom 2011 0.80
96 The biflavonoid amentoflavone inhibits neovascularization preventing the activity of proangiogenic vascular endothelial growth factors. J Biol Chem 2011 0.79
97 Application of mass spectrometry to determine the activity and specificity of pectin lyase A. Carbohydr Res 2002 0.79
98 Integration of the barley genetic and seed proteome maps for chromosome 1H, 2H, 3H, 5H and 7H. Funct Integr Genomics 2008 0.79
99 2-DE-based proteomic investigation of the saliva of the Amazonian triatomine vectors of Chagas disease: Rhodnius brethesi and Rhodnius robustus. J Proteomics 2011 0.79
100 Collisional activation by MALDI tandem time-of-flight mass spectrometry induces intramolecular migration of amide hydrogens in protonated peptides. Mol Cell Proteomics 2005 0.79
101 Gas-phase fragmentation of peptides by MALDI in-source decay with limited amide hydrogen (1H/2H) scrambling. Anal Chem 2008 0.79
102 Identification of dynamic changes in proteins associated with the cellular cytoskeleton after exposure to okadaic acid. Mar Drugs 2013 0.78
103 Formation of truncated proteins and high-molecular-mass aggregates upon soft illumination of photosynthetic proteins. J Proteome Res 2005 0.78
104 Proteomics in experimental gerontology. Exp Gerontol 2002 0.78
105 Moving pieces in a venomic puzzle: unveiling post-translationally modified toxins from Tityus serrulatus. J Proteome Res 2013 0.78
106 Combined N-glycome and N-glycoproteome analysis of the Lotus japonicus seed globulin fraction shows conservation of protein structure and glycosylation in legumes. J Proteome Res 2013 0.78
107 Differential fragmentation patterns of pectin oligogalacturonides observed by nanoelectrospray quadrupole ion-trap mass spectrometry using automated spectra interpretation. J Mass Spectrom 2007 0.78
108 Cell surface proteome analysis of human-hosted Trypanosoma cruzi life stages. J Proteome Res 2014 0.78
109 Long term anoxia in rainbow trout investigated by 2-DE and MS/MS. Proteomics 2008 0.78
110 Aspects of cuticular sclerotization in the locust, Scistocerca gregaria, and the beetle, Tenebrio molitor. Insect Biochem Mol Biol 2006 0.78
111 MHC class II loading of high or low affinity peptides directed by Ii/peptide fusion constructs: implications for T cell activation. Int Immunol 2003 0.78
112 Comparison of the neutrophil proteome in trauma patients and normal controls. Protein Pept Lett 2012 0.78
113 Fractionation, solid-phase immobilization and chemical degradation of long pectin oligogalacturonides. Initial steps towards sequencing of oligosaccharides. Carbohydr Res 2005 0.77
114 On-target sample preparation of 4-sulfophenyl isothiocyanate-derivatized peptides using AnchorChip Targets. J Mass Spectrom 2008 0.77
115 Absolute quantitation of proteins by acid hydrolysis combined with amino acid detection by mass spectrometry. Methods Mol Biol 2012 0.77
116 Comparison of two anoxia models in rainbow trout cells by a 2-DE and MS/MS-based proteome approach. Proteomics 2008 0.77
117 Identification of protein-protein interfaces implicated in CD80-CD28 costimulatory signaling. J Immunol 2004 0.77
118 Proteomics of the photoneuroendocrine circadian system of the brain. Mass Spectrom Rev 2010 0.77
119 The proteomic profile of Stichodactyla duerdeni secretion reveals the presence of a novel O-linked glycopeptide. J Proteomics 2013 0.76
120 Characterization of plant oligosaccharides by matrix-assisted laser desorption/ionization and electrospray mass spectrometry. J Mass Spectrom 2003 0.76
121 Molecular characterization of major cat allergen Fel d 1: expression of heterodimer by use of a baculovirus expression system. J Biol Chem 2004 0.76
122 Isotope labeling-based quantitative proteomics of developing seeds of castor oil seed (Ricinus communis L.). J Proteome Res 2013 0.76
123 The interaction of the antitoxin DM43 with a snake venom metalloproteinase analyzed by mass spectrometry and surface plasmon resonance. J Mass Spectrom 2012 0.76
124 SPR/MS: recovery from sensorchips for protein identification by MALDI-TOF mass spectrometry. Methods Mol Biol 2010 0.76
125 Assessing CMT cell line stability by two dimensional polyacrylamide gel electrophoresis and mass spectrometry based proteome analysis. J Proteomics 2008 0.76
126 A rapid screening method to monitor expression of recombinant proteins from various prokaryotic and eukaryotic expression systems using matrix-assisted laser desorption ionization-time-of-flight mass spectrometry. Anal Biochem 2002 0.75
127 An on-target desalting and concentration sample preparation protocol for MALDI-MS and MS/MS analysis. Methods Mol Biol 2012 0.75
128 Combinations of SPR and MS for characterization of native and recombinant proteins in cell lysates. Mol Biotechnol 2006 0.75
129 μ-Theraphotoxin-An1a: primary structure determination and assessment of the pharmacological activity of a promiscuous anti-insect toxin from the venom of the tarantula Acanthoscurria natalensis (Mygalomorphae, Theraphosidae). Toxicon 2013 0.75
130 Mass spectrometry based approach for identification and characterisation of fluorescent proteins from marine organisms. J Proteomics 2011 0.75
131 Regulation of phospholipase D2 by GTP-dependent interaction with dynamin. Adv Enzyme Regul 2004 0.75
132 Sequence determination of three cuticular proteins and isoforms from the migratory locust, Locusta migratoria, using a combination of Edman degradation and mass spectrometric techniques. Biochim Biophys Acta 2003 0.75
133 De novo sequence analysis and intact mass measurements for characterization of phycocyanin subunit isoforms from the blue-green alga Aphanizomenon flos-aquae. J Mass Spectrom 2009 0.75
134 Biomarker candidate discovery in Atlantic cod (Gadus morhua) continuously exposed to North Sea produced water from egg to fry. Aquat Toxicol 2009 0.75
135 Exploring the "intensity fading" phenomenon in the study of noncovalent interactions by MALDI-TOF mass spectrometry. J Am Soc Mass Spectrom 2006 0.75
136 Comparative proteome analysis of three mouse lung adenocarcinoma CMT cell lines with different metastatic potential by two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2008 0.75
137 Characterization of oligosaccharides from industrial fermentation residues by matrix-assisted laser desorption/ionization, electrospray mass spectrometry, and gas chromatography mass spectrometry. Mol Biotechnol 2007 0.75
138 Absolute quantitation of proteins by a combination of acid hydrolysis and matrix-assisted laser desorption/ionization mass spectrometry. Anal Chem 2004 0.75
139 Two-dimensional gel electrophoresis pattern (pH 6-11) and identification of water-soluble barley seed and malt proteins by mass spectrometry. Proteomics 2004 0.75
140 Fish proteins as targets of ferrous-catalyzed oxidation: identification of protein carbonyls by fluorescent labeling on two-dimensional gels and MALDI-TOF/TOF mass spectrometry. J Agric Food Chem 2011 0.75