Leveraging a clinical research information system to assist biospecimen data and workflow management: a hybrid approach.

PubWeight™: 0.78‹?›

🔗 View Article (PMC 3174108)

Published in J Clin Bioinforma on August 25, 2011

Authors

Prakash M Nadkarni1, Rowena Kemp, Chirag R Parikh

Author Affiliations

1: Yale University School of Medicine, New Haven, CT, USA. Prakash.Nadkarni@yale.edu.

Articles cited by this

The eMERGE Network: a consortium of biorepositories linked to electronic medical records data for conducting genomic studies. BMC Med Genomics (2011) 9.20

Managing attribute--value clinical trials data using the ACT/DB client-server database system. J Am Med Inform Assoc (1998) 7.68

Biomarkers for the diagnosis and risk stratification of acute kidney injury: a systematic review. Kidney Int (2007) 4.74

Principles of human subjects protections applied in an opt-out, de-identified biobank. Clin Transl Sci (2010) 3.84

2012 best practices for repositories collection, storage, retrieval, and distribution of biological materials for research international society for biological and environmental repositories. Biopreserv Biobank (2012) 2.41

Centralized biorepositories for genetic and genomic research. JAMA (2008) 1.49

Evolutionary concepts in biobanking - the BC BioLibrary. J Transl Med (2009) 1.29

Biorepository standards and protocols for collecting, processing, and storing human tissues. Methods Mol Biol (2008) 1.09

Methods and implementation of a central biosample and data management in a three-centre clinical study. Comput Methods Programs Biomed (2008) 1.07

National Mesothelioma Virtual Bank: a standard based biospecimen and clinical data resource to enhance translational research. BMC Cancer (2008) 0.92

A decade of experience in the development and implementation of tissue banking informatics tools for intra and inter-institutional translational research. J Pathol Inform (2010) 0.91

Articles by these authors

(truncated to the top 100)

Long-term risk of mortality and other adverse outcomes after acute kidney injury: a systematic review and meta-analysis. Am J Kidney Dis (2009) 6.54

Chronic kidney disease after acute kidney injury: a systematic review and meta-analysis. Kidney Int (2011) 5.70

Role of intensive glucose control in development of renal end points in type 2 diabetes mellitus: systematic review and meta-analysis intensive glucose control in type 2 diabetes. Arch Intern Med (2012) 4.02

Risks of proteinuria and hypertension with bevacizumab, an antibody against vascular endothelial growth factor: systematic review and meta-analysis. Am J Kidney Dis (2007) 3.47

Urine neutrophil gelatinase-associated lipocalin is an early marker of acute kidney injury in critically ill children: a prospective cohort study. Crit Care (2007) 3.19

Atypical antipsychotic drugs and the risk for acute kidney injury and other adverse outcomes in older adults: a population-based cohort study. Ann Intern Med (2014) 2.93

Recovery of kidney function after acute kidney injury in the elderly: a systematic review and meta-analysis. Am J Kidney Dis (2008) 2.85

Duration of acute kidney injury impacts long-term survival after cardiac surgery. Ann Thorac Surg (2010) 2.61

Commonly used surrogates for baseline renal function affect the classification and prognosis of acute kidney injury. Kidney Int (2009) 2.53

Cardiovascular outcomes in the Irbesartan Diabetic Nephropathy Trial of patients with type 2 diabetes and overt nephropathy. Ann Intern Med (2003) 2.47

IL-18 and urinary NGAL predict dialysis and graft recovery after kidney transplantation. J Am Soc Nephrol (2009) 2.43

Acute kidney injury in cirrhosis. Hepatology (2008) 2.43

KDOQI US commentary on the 2012 KDIGO clinical practice guideline for acute kidney injury. Am J Kidney Dis (2013) 2.42

Incidence, risk factors, and outcomes of acute kidney injury after pediatric cardiac surgery: a prospective multicenter study. Crit Care Med (2011) 2.41

Proteomic identification of early biomarkers of acute kidney injury after cardiac surgery in children. Am J Kidney Dis (2010) 2.35

Vascular cytochrome P450 4A expression and 20-hydroxyeicosatetraenoic acid synthesis contribute to endothelial dysfunction in androgen-induced hypertension. Hypertension (2007) 2.34

Endothelial dysfunction and hypertension in rats transduced with CYP4A2 adenovirus. Circ Res (2006) 2.26

Underrepresentation of renal disease in randomized controlled trials of cardiovascular disease. JAMA (2006) 2.22

Ascertainment and epidemiology of acute kidney injury varies with definition interpretation. Clin J Am Soc Nephrol (2008) 2.18

Association between delayed graft function and allograft and patient survival: a systematic review and meta-analysis. Nephrol Dial Transplant (2008) 2.14

Statin use associates with a lower incidence of acute kidney injury after major elective surgery. J Am Soc Nephrol (2011) 2.11

Association of AKI with mortality and complications in hospitalized patients with cirrhosis. Hepatology (2012) 2.01

Biomarkers predict progression of acute kidney injury after cardiac surgery. J Am Soc Nephrol (2012) 2.00

Living kidney donors requiring transplantation: focus on African Americans. Transplantation (2007) 1.92

New fibrate use and acute renal outcomes in elderly adults: a population-based study. Ann Intern Med (2012) 1.91

Design of clinical trials in acute kidney injury: report from an NIDDK workshop on trial methodology. Clin J Am Soc Nephrol (2012) 1.90

Kidney biomarkers and differential diagnosis of patients with cirrhosis and acute kidney injury. Hepatology (2014) 1.89

Early postoperative serum cystatin C predicts severe acute kidney injury following pediatric cardiac surgery. Kidney Int (2011) 1.88

Diagnostic value of urine microscopy for differential diagnosis of acute kidney injury in hospitalized patients. Clin J Am Soc Nephrol (2008) 1.85

Cardiovascular disease and hypertension risk in living kidney donors: an analysis of health administrative data in Ontario, Canada. Transplantation (2008) 1.83

Evaluation and initial management of acute kidney injury. Clin J Am Soc Nephrol (2008) 1.83

The duration of postoperative acute kidney injury is an additional parameter predicting long-term survival in diabetic veterans. Kidney Int (2010) 1.81

Marked variation in the definition and diagnosis of delayed graft function: a systematic review. Nephrol Dial Transplant (2008) 1.74

The prognostic importance of a small acute decrement in kidney function in hospitalized patients: a systematic review and meta-analysis. Am J Kidney Dis (2007) 1.66

Elevated urinary IL-18 levels at the time of ICU admission predict adverse clinical outcomes. Clin J Am Soc Nephrol (2010) 1.64

Oral bisphosphonate use in the elderly is not associated with acute kidney injury. Kidney Int (2012) 1.64

The assessment, serial evaluation, and subsequent sequelae of acute kidney injury (ASSESS-AKI) study: design and methods. BMC Nephrol (2010) 1.63

Acute dialysis risk in living kidney donors. Nephrol Dial Transplant (2012) 1.60

Renal impairment predicts long-term mortality risk after acute myocardial infarction. J Am Soc Nephrol (2007) 1.57

Urinary interleukin-18 is an acute kidney injury biomarker in critically ill children. Nephrol Dial Transplant (2007) 1.55

Urinary biomarkers for acute kidney injury: perspectives on translation. Clin J Am Soc Nephrol (2008) 1.51

Contribution of acute kidney injury toward morbidity and mortality in burns: a contemporary analysis. Am J Kidney Dis (2007) 1.48

Risk of poor outcomes with novel and traditional biomarkers at clinical AKI diagnosis. Clin J Am Soc Nephrol (2011) 1.46

Urinary tract infections after renal transplantation: a retrospective review at two US transplant centers. Clin Transplant (2005) 1.41

Trends in the incidence of acute kidney injury in patients hospitalized with acute myocardial infarction. Arch Intern Med (2012) 1.34

Arachidonic acid inhibits epithelial Na channel via cytochrome P450 (CYP) epoxygenase-dependent metabolic pathways. J Gen Physiol (2004) 1.33

Secular trends in acute dialysis after elective major surgery--1995 to 2009. CMAJ (2012) 1.33

Association of postoperative proteinuria with AKI after cardiac surgery among patients at high risk. Clin J Am Soc Nephrol (2012) 1.32

Kidney disease is an independent risk factor for adverse fetal and maternal outcomes in pregnancy. Am J Kidney Dis (2004) 1.31

The impact of hepatitis C virus coinfection on HIV-related kidney disease: a systematic review and meta-analysis. AIDS (2008) 1.30

Chitinase 3-like 1 regulates cellular and tissue responses via IL-13 receptor α2. Cell Rep (2013) 1.24

Prevention and treatment of acute kidney injury in patients undergoing cardiac surgery: a systematic review. Am J Nephrol (2010) 1.23

Design of clinical trials in acute kidney injury: a report from an NIDDK workshop--prevention trials. Clin J Am Soc Nephrol (2012) 1.20

Screening for kidney diseases: older measures versus novel biomarkers. Clin J Am Soc Nephrol (2008) 1.20

The association of albumin/creatinine ratio with postoperative AKI in children undergoing cardiac surgery. Clin J Am Soc Nephrol (2012) 1.20

Characterization of acute liver failure and development of a continuous risk of death staging system in children. J Hepatol (2005) 1.20

Loop diuretic efficiency: a metric of diuretic responsiveness with prognostic importance in acute decompensated heart failure. Circ Heart Fail (2013) 1.19

Predicting acute kidney injury after cardiac surgery: a systematic review. Ann Thorac Surg (2012) 1.17

Presurgical serum cystatin C and risk of acute kidney injury after cardiac surgery. Am J Kidney Dis (2011) 1.17

Evaluating the ROC performance of markers for future events. Lifetime Data Anal (2007) 1.16

Health insurance status of US living kidney donors. Clin J Am Soc Nephrol (2010) 1.16

Uncomplicated acute renal failure and hospital resource utilization: a retrospective multicenter analysis. Am J Kidney Dis (2005) 1.16

Urine microscopy is associated with severity and worsening of acute kidney injury in hospitalized patients. Clin J Am Soc Nephrol (2010) 1.15

Design of clinical trials in AKI: a report from an NIDDK workshop. Trials of patients with sepsis and in selected hospital settings. Clin J Am Soc Nephrol (2012) 1.13

Acetaminophen toxicity: suicidal vs. accidental. Crit Care (2002) 1.13

Prevention of contrast-induced AKI: a review of published trials and the design of the prevention of serious adverse events following angiography (PRESERVE) trial. Clin J Am Soc Nephrol (2013) 1.12

Low Na intake suppresses expression of CYP2C23 and arachidonic acid-induced inhibition of ENaC. Am J Physiol Renal Physiol (2006) 1.12

Clinical utility of biomarkers of AKI in cardiac surgery and critical illness. Clin J Am Soc Nephrol (2013) 1.12

Timing of hemoconcentration during treatment of acute decompensated heart failure and subsequent survival: importance of sustained decongestion. J Am Coll Cardiol (2013) 1.10

Preoperative serum brain natriuretic peptide and risk of acute kidney injury after cardiac surgery. Circulation (2012) 1.10

Effects of exogenous heme on renal function: role of heme oxygenase and cyclooxygenase. Hypertension (2003) 1.10

Long-term stability of serum sodium in hemodialysis patients. Blood Purif (2010) 1.09

Epoxyeicosatrienoic acid activates BK channels in the cortical collecting duct. J Am Soc Nephrol (2008) 1.09

Serum cystatin C- versus creatinine-based definitions of acute kidney injury following cardiac surgery: a prospective cohort study. Am J Kidney Dis (2012) 1.09

Renal ultrasonography in the evaluation of acute kidney injury: developing a risk stratification framework. Arch Intern Med (2010) 1.08

A comparison of alternative serum biomarkers with creatinine for predicting allograft function after kidney transplantation. Transplantation (2011) 1.04

Preimplant histologic acute tubular necrosis and allograft outcomes. Clin J Am Soc Nephrol (2014) 1.04

Comparisons of creatinine and cystatin C for detection of kidney disease and prediction of all-cause mortality in HIV-infected women. AIDS (2013) 1.01

Urinary markers of kidney injury and kidney function decline in HIV-infected women. J Acquir Immune Defic Syndr (2012) 1.01

Smooth muscle--specific expression of CYP4A1 induces endothelial sprouting in renal arterial microvessels. Circ Res (2003) 1.01

Association between peritransplant kidney injury biomarkers and 1-year allograft outcomes. Clin J Am Soc Nephrol (2012) 1.01

Hepatitis C and the risk of kidney disease and mortality in veterans with HIV. J Acquir Immune Defic Syndr (2010) 1.01

Chitinase-like protein Brp-39/YKL-40 modulates the renal response to ischemic injury and predicts delayed allograft function. J Am Soc Nephrol (2013) 1.01

Clinical applications of biomarkers for acute kidney injury. Am J Kidney Dis (2011) 1.01

Is delayed graft function causally associated with long-term outcomes after kidney transplantation? Instrumental variable analysis. Transplantation (2013) 1.00

Searching for genes that matter in acute kidney injury: a systematic review. Clin J Am Soc Nephrol (2009) 0.99

Changes in kidney function among Nicaraguan sugarcane workers. Int J Occup Environ Health (2015) 0.99

Comorbid diabetes and the risk of progressive chronic kidney disease in HIV-infected adults: data from the Veterans Aging Cohort Study. J Acquir Immune Defic Syndr (2012) 0.98

Risk of acute kidney injury from oral acyclovir: a population-based study. Am J Kidney Dis (2013) 0.96

Preoperative proteinuria predicts acute kidney injury in patients undergoing cardiac surgery. J Thorac Cardiovasc Surg (2011) 0.96

Association Between Organ Procurement Organization Social Network Centrality and Kidney Discard and Transplant Outcomes. Transplantation (2015) 0.95

Deceased-donor kidney perfusate and urine biomarkers for kidney allograft outcomes: a systematic review. Nephrol Dial Transplant (2012) 0.94

Living kidney donor informed consent practices vary between US and non-US centers. Nephrol Dial Transplant (2008) 0.93

Preoperative angiotensin-converting enzyme inhibitors and angiotensin receptor blocker use and acute kidney injury in patients undergoing cardiac surgery. Nephrol Dial Transplant (2013) 0.93

Intra-amniotic infection upregulates neutrophil gelatinase-associated lipocalin (NGAL) expression at the maternal-fetal interface at term: implications for infection-related preterm birth. Reprod Sci (2011) 0.92

Acute kidney injury in patients with cirrhosis: perils and promise. Clin Gastroenterol Hepatol (2013) 0.92

Atrial natriuretic peptide for preventing and treating acute kidney injury. Cochrane Database Syst Rev (2009) 0.90

Acute kidney injury: defining prerenal azotemia in clinical practice and research. Nat Rev Nephrol (2010) 0.90

Optimal method of coronary revascularization in patients receiving dialysis: systematic review. Clin J Am Soc Nephrol (2009) 0.90

Cardiovascular medication use after coronary bypass surgery in patients with renal dysfunction: a national Veterans Administration study. Kidney Int (2005) 0.90