Published in Acta Crystallogr Sect F Struct Biol Cryst Commun on October 27, 2011
Pathological phenotypes and in vivo DNA cleavage by unrestrained activity of a phosphorothioate-based restriction system in Salmonella. Mol Microbiol (2014) 0.90
Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation. PLoS One (2012) 0.79
Site-specific degradation of Streptomyces lividans DNA during electrophoresis in buffers contaminated with ferrous iron. Nucleic Acids Res (1988) 1.83
A novel DNA modification by sulphur. Mol Microbiol (2005) 1.79
DNA phosphorothioation is widespread and quantized in bacterial genomes. Proc Natl Acad Sci U S A (2011) 1.69
A novel DNA modification by sulfur: DndA is a NifS-like cysteine desulfurase capable of assembling DndC as an iron-sulfur cluster protein in Streptomyces lividans. Biochemistry (2007) 1.54
A novel host-specific restriction system associated with DNA backbone S-modification in Salmonella. Nucleic Acids Res (2010) 1.36
dndDB: a database focused on phosphorothioation of the DNA backbone. PLoS One (2009) 1.31
Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA. PLoS Genet (2010) 1.27
Functional analysis of spfD gene involved in DNA phosphorothioation in Pseudomonas fluorescens Pf0-1. FEBS Lett (2009) 1.24
DNA modification by sulfur: analysis of the sequence recognition specificity surrounding the modification sites. Nucleic Acids Res (2007) 1.23
DNA phosphorothioation in Streptomyces lividans: mutational analysis of the dnd locus. BMC Microbiol (2009) 1.09
Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy (2012) 20.08
The genome of the cucumber, Cucumis sativus L. Nat Genet (2009) 8.19
The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature (2011) 6.73
Akt inhibition promotes autophagy and sensitizes PTEN-null tumors to lysosomotropic agents. J Cell Biol (2008) 3.36
Structural basis of the Cks1-dependent recognition of p27(Kip1) by the SCF(Skp2) ubiquitin ligase. Mol Cell (2005) 2.75
Chern semimetal and the quantized anomalous Hall effect in HgCr2Se4. Phys Rev Lett (2011) 2.74
Phosphorothioation of DNA in bacteria by dnd genes. Nat Chem Biol (2007) 2.57
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions. Nat Genet (2012) 2.33
Identification of cell cycle-regulated genes in fission yeast. Mol Biol Cell (2004) 2.29
Upregulation of SATB1 promotes tumor growth and metastasis in liver cancer. Liver Int (2012) 2.02
InterDom: a database of putative interacting protein domains for validating predicted protein interactions and complexes. Nucleic Acids Res (2003) 1.94
Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations. Nucleic Acids Res (2006) 1.93
TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea. Nucleic Acids Res (2010) 1.83
A novel DNA modification by sulphur. Mol Microbiol (2005) 1.79
Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a multidrug-resistant strain isolated from human sputum. J Bacteriol (2012) 1.77
mGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes. Nucleic Acids Res (2010) 1.73
DNA phosphorothioation is widespread and quantized in bacterial genomes. Proc Natl Acad Sci U S A (2011) 1.69
In vivo viscoelastic properties of the brain in normal pressure hydrocephalus. NMR Biomed (2010) 1.67
ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res (2011) 1.62
Early diagnosis of ataxia-telangiectasia using radiosensitivity testing. J Pediatr (2002) 1.57
MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands. Nucleic Acids Res (2007) 1.56
A novel DNA modification by sulfur: DndA is a NifS-like cysteine desulfurase capable of assembling DndC as an iron-sulfur cluster protein in Streptomyces lividans. Biochemistry (2007) 1.54
'Streptomyces nanchangensis', a producer of the insecticidal polyether antibiotic nanchangmycin and the antiparasitic macrolide meilingmycin, contains multiple polyketide gene clusters. Microbiology (2002) 1.54
Xanthomonas campestris cell-cell communication involves a putative nucleotide receptor protein Clp and a hierarchical signalling network. Mol Microbiol (2007) 1.53
Analysis of a genomic island housing genes for DNA S-modification system in Streptomyces lividans 66 and its counterparts in other distantly related bacteria. Mol Microbiol (2007) 1.53
Discovery of molecular mechanisms of traditional Chinese medicinal formula Si-Wu-Tang using gene expression microarray and connectivity map. PLoS One (2011) 1.49
Genome scale analysis of diffusible signal factor regulon in Xanthomonas campestris pv. campestris: identification of novel cell-cell communication-dependent genes and functions. Mol Microbiol (2006) 1.41
Resveratrol differentially modulates inflammatory responses of microglia and astrocytes. J Neuroinflammation (2010) 1.41
A novel gene, encoding 6-hydroxy-3-succinoylpyridine hydroxylase, involved in nicotine degradation by Pseudomonas putida strain S16. Appl Environ Microbiol (2008) 1.38
A novel host-specific restriction system associated with DNA backbone S-modification in Salmonella. Nucleic Acids Res (2010) 1.36
A comprehensive census of microbial diversity in hot springs of Tengchong, Yunnan Province China using 16S rRNA gene pyrosequencing. PLoS One (2013) 1.33
A complete gene cluster from Streptomyces nanchangensis NS3226 encoding biosynthesis of the polyether ionophore nanchangmycin. Chem Biol (2003) 1.33
Functional analysis of the validamycin biosynthetic gene cluster and engineered production of validoxylamine A. Chem Biol (2006) 1.33
Novel nicotine oxidoreductase-encoding gene involved in nicotine degradation by Pseudomonas putida strain S16. Appl Environ Microbiol (2008) 1.33
Identification of Arabidopsis rat mutants. Plant Physiol (2003) 1.32
dndDB: a database focused on phosphorothioation of the DNA backbone. PLoS One (2009) 1.31
Gene cluster responsible for validamycin biosynthesis in Streptomyces hygroscopicus subsp. jinggangensis 5008. Appl Environ Microbiol (2005) 1.31
RNA-Seq improves annotation of protein-coding genes in the cucumber genome. BMC Genomics (2011) 1.27
Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA. PLoS Genet (2010) 1.27
Insights into polyether biosynthesis from analysis of the nigericin biosynthetic gene cluster in Streptomyces sp. DSM4137. Chem Biol (2007) 1.27
Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex. Chem Biol (2003) 1.27
Functional analysis of spfD gene involved in DNA phosphorothioation in Pseudomonas fluorescens Pf0-1. FEBS Lett (2009) 1.24
DNA modification by sulfur: analysis of the sequence recognition specificity surrounding the modification sites. Nucleic Acids Res (2007) 1.23
Circulating and tumor-infiltrating myeloid-derived suppressor cells in patients with colorectal carcinoma. PLoS One (2013) 1.22
Disruption of PH-kinase domain interactions leads to oncogenic activation of AKT in human cancers. Proc Natl Acad Sci U S A (2012) 1.22
Alteration of brain viscoelasticity after shunt treatment in normal pressure hydrocephalus. Neuroradiology (2011) 1.21
Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities. ISME J (2012) 1.20
ASD: a comprehensive database of allosteric proteins and modulators. Nucleic Acids Res (2010) 1.18
Targeting activated Akt with GDC-0068, a novel selective Akt inhibitor that is efficacious in multiple tumor models. Clin Cancer Res (2013) 1.18
Characterization of the polyoxin biosynthetic gene cluster from Streptomyces cacaoi and engineered production of polyoxin H. J Biol Chem (2009) 1.17
ATPase genes of diverse multidrug-resistant Acinetobacter baumannii isolates frequently harbour integrated DNA. J Antimicrob Chemother (2008) 1.17
Genomic analysis of Pseudomonas putida: genes in a genome island are crucial for nicotine degradation. Sci Rep (2012) 1.15
Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16. J Bacteriol (2011) 1.15
Dissecting the oncogenic potential of Gli2: deletion of an NH(2)-terminal fragment alters skin tumor phenotype. Cancer Res (2002) 1.15
Radiologic-pathologic analysis of contrast-enhanced and diffusion-weighted MR imaging in patients with HCC after TACE: diagnostic accuracy of 3D quantitative image analysis. Radiology (2014) 1.14
The bifunctional glyceryl transferase/phosphatase OzmB belonging to the HAD superfamily that diverts 1,3-bisphosphoglycerate into polyketide biosynthesis. J Am Chem Soc (2006) 1.13
Sequencing angiosperm plastid genomes made easy: a complete set of universal primers and a case study on the phylogeny of saxifragales. Genome Biol Evol (2013) 1.13
A cellulose synthase-like protein involved in hyphal tip growth and morphological differentiation in streptomyces. J Bacteriol (2008) 1.12
The mildiomycin biosynthesis: initial steps for sequential generation of 5-hydroxymethylcytidine 5'-monophosphate and 5-hydroxymethylcytosine in Streptoverticillium rimofaciens ZJU5119. Chembiochem (2008) 1.12
Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14. Infect Immun (2010) 1.10
DNA phosphorothioation in Streptomyces lividans: mutational analysis of the dnd locus. BMC Microbiol (2009) 1.09
Direct evidence that ThiI is an ATP pyrophosphatase for the adenylation of uridine in 4-thiouridine biosynthesis. Chembiochem (2008) 1.09
Biotransformation of isoeugenol to vanillin by a newly isolated Bacillus pumilus strain: identification of major metabolites. J Biotechnol (2007) 1.08
Improving the measurement of semantic similarity between gene ontology terms and gene products: insights from an edge- and IC-based hybrid method. PLoS One (2013) 1.08
Identification and analysis of the biosynthetic gene cluster encoding the thiopeptide antibiotic cyclothiazomycin in Streptomyces hygroscopicus 10-22. Appl Environ Microbiol (2010) 1.08
Characterization of the tunicamycin gene cluster unveiling unique steps involved in its biosynthesis. Protein Cell (2010) 1.06
Improved HIV-1 RNA quantitation by COBAS AmpliPrep/COBAS TaqMan HIV-1 Test, v2.0 using a novel dual-target approach. J Clin Virol (2010) 1.06
High photocatalytic activity of ZnO-carbon nanofiber heteroarchitectures. ACS Appl Mater Interfaces (2011) 1.05
A self-ligation method for PCR-sequencing the telomeres of Streptomyces and Mycobacterium linear replicons. J Microbiol Methods (2012) 1.04
ValC, a new type of C7-Cyclitol kinase involved in the biosynthesis of the antifungal agent validamycin A. Chembiochem (2007) 1.04
Phosphorothioate DNA as an antioxidant in bacteria. Nucleic Acids Res (2012) 1.03
A novel target of IscS in Escherichia coli: participating in DNA phosphorothioation. PLoS One (2012) 1.02
Cometabolic degradation of dibenzofuran and dibenzothiophene by a newly isolated carbazole-degrading Sphingomonas sp. strain. Appl Environ Microbiol (2007) 1.02
Structural basis for site-specific reading of unmodified R2 of histone H3 tail by UHRF1 PHD finger. Cell Res (2011) 1.02
sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomes. PLoS One (2010) 1.02
SecReT4: a web-based bacterial type IV secretion system resource. Nucleic Acids Res (2012) 1.01
PolY, a transcriptional regulator with ATPase activity, directly activates transcription of polR in polyoxin biosynthesis in Streptomyces cacaoi. Mol Microbiol (2009) 1.01
Identification of the gene cluster involved in muraymycin biosynthesis from Streptomyces sp. NRRL 30471. Mol Biosyst (2010) 1.01
The enzymology of polyether biosynthesis. Methods Enzymol (2009) 1.01
Genomic and transcriptomic insights into the thermo-regulated biosynthesis of validamycin in Streptomyces hygroscopicus 5008. BMC Genomics (2012) 1.00
Unveiling the post-PKS redox tailoring steps in biosynthesis of the type II polyketide antitumor antibiotic xantholipin. Chem Biol (2012) 1.00
BPhyOG: an interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes. BMC Bioinformatics (2007) 1.00
Streptomyces coelicolor A3(2) lacks a genomic island present in the chromosome of Streptomyces lividans 66. Appl Environ Microbiol (2004) 0.99
Case-control study of risk factors for no light perception after open-globe injury: eye injury vitrectomy study. Retina (2011) 0.99
Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification. Cell Res (2012) 0.99
Stereospecific biosynthesis of β-methyltryptophan from (L)-tryptophan features a stereochemical switch. Angew Chem Int Ed Engl (2013) 0.99
Mechanism and stereospecificity of a fully saturating polyketide synthase module: nanchangmycin synthase module 2 and its dehydratase domain. J Am Chem Soc (2010) 0.98