Published in Annu Rev Food Sci Technol on January 01, 2010
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The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae. Curr Biol (2012) 1.02
Induction of sexual reproduction and genetic diversity in the cheese fungus Penicillium roqueforti. Evol Appl (2014) 0.89
Phylogenomic Analysis of Oenococcus oeni Reveals Specific Domestication of Strains to Cider and Wines. Genome Biol Evol (2015) 0.85
Winemaking and bioprocesses strongly shaped the genetic diversity of the ubiquitous yeast Torulaspora delbrueckii. PLoS One (2014) 0.84
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Genomic basis of the differences between cider and dessert apple varieties. Evol Appl (2015) 0.78
High genetic diversity among strains of the unindustrialized lactic acid bacterium Carnobacterium maltaromaticum in dairy products as revealed by multilocus sequence typing. Appl Environ Microbiol (2014) 0.78
Combination of culture-independent and culture-dependent molecular methods for the determination of bacterial community of iru, a fermented Parkia biglobosa seeds. Front Microbiol (2013) 0.77
The genomics of microbial domestication in the fermented food environment. Curr Opin Genet Dev (2015) 0.77
ZpdN, a Plasmid-Encoded Sigma Factor Homolog, Induces pBS32-Dependent Cell Death in Bacillus subtilis. J Bacteriol (2016) 0.75
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Stress Physiology of Lactic Acid Bacteria. Microbiol Mol Biol Rev (2016) 0.75
The S-layer Associated Serine Protease Homolog PrtX Impacts Cell Surface-Mediated Microbe-Host Interactions of Lactobacillus acidophilus NCFM. Front Microbiol (2017) 0.75
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes. Nucleic Acids Res (2003) 7.56
Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc Natl Acad Sci U S A (2005) 4.46
Genome-scale analyses of health-promoting bacteria: probiogenomics. Nat Rev Microbiol (2008) 3.25
Regulation of induced colonic inflammation by Lactobacillus acidophilus deficient in lipoteichoic acid. Proc Natl Acad Sci U S A (2011) 3.19
S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions. Proc Natl Acad Sci U S A (2008) 2.65
Lactobacilli activate human dendritic cells that skew T cells toward T helper 1 polarization. Proc Natl Acad Sci U S A (2005) 2.35
Functional analysis of putative adhesion factors in Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2005) 2.24
GAMOLA: a new local solution for sequence annotation and analyzing draft and finished prokaryotic genomes. OMICS (2003) 2.20
Engineered bacteriophage-defence systems in bioprocessing. Nat Rev Microbiol (2006) 2.10
Anti-inflammatory properties of Lactobacillus gasseri expressing manganese superoxide dismutase using the interleukin 10-deficient mouse model of colitis. Am J Physiol Gastrointest Liver Physiol (2007) 1.91
New scientific paradigms for probiotics and prebiotics. J Clin Gastroenterol (2003) 1.88
Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus. Proc Natl Acad Sci U S A (2003) 1.84
Probiotics to minimize the disruption of faecal microbiota in healthy subjects undergoing antibiotic therapy. J Med Microbiol (2009) 1.58
Characterization of a novel bile-inducible operon encoding a two-component regulatory system in Lactobacillus acidophilus. J Bacteriol (2007) 1.58
PathwayVoyager: pathway mapping using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database. BMC Genomics (2005) 1.55
Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays. Proc Natl Acad Sci U S A (2006) 1.50
Modulation of the microbial ecology of the human colon by probiotics, prebiotics and synbiotics to enhance human health: an overview of enabling science and potential applications. FEMS Microbiol Ecol (2005) 1.50
Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus. Appl Environ Microbiol (2005) 1.41
Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage. PLoS One (2012) 1.41
Development and application of a upp-based counterselective gene replacement system for the study of the S-layer protein SlpX of Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2009) 1.40
Identification and inactivation of genetic loci involved with Lactobacillus acidophilus acid tolerance. Appl Environ Microbiol (2004) 1.40
The genomics of lactic acid bacteria. Trends Microbiol (2007) 1.40
Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages. Appl Environ Microbiol (2004) 1.38
Abating colon cancer polyposis by Lactobacillus acidophilus deficient in lipoteichoic acid. Proc Natl Acad Sci U S A (2012) 1.30
Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism. Appl Environ Microbiol (2008) 1.29
Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei. Appl Environ Microbiol (2006) 1.28
Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification. Appl Environ Microbiol (2003) 1.28
Expression of antisense RNA targeted against Streptococcus thermophilus bacteriophages. Appl Environ Microbiol (2002) 1.27
Abortive phage resistance mechanism AbiZ speeds the lysis clock to cause premature lysis of phage-infected Lactococcus lactis. J Bacteriol (2006) 1.14
Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods. Appl Environ Microbiol (2004) 1.14
Functional roles of aggregation-promoting-like factor in stress tolerance and adherence of Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2010) 1.11
Targeting mucosal dendritic cells with microbial antigens from probiotic lactic acid bacteria. Expert Rev Vaccines (2008) 1.05
Construction of vectors for inducible and constitutive gene expression in Lactobacillus. Microb Biotechnol (2010) 1.04
Characterization of six Leuconostoc fallax bacteriophages isolated from an industrial sauerkraut fermentation. Appl Environ Microbiol (2002) 1.04
Role of transporter proteins in bile tolerance of Lactobacillus acidophilus. Appl Environ Microbiol (2009) 1.04
Genomic and phenotypic evidence for probiotic influences of Lactobacillus gasseri on human health. FEMS Microbiol Rev (2013) 1.03
Probiotics, prebiotics, and the host microbiome: the science of translation. Ann N Y Acad Sci (2013) 1.01
Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus. Appl Environ Microbiol (2006) 0.99
Characterization of the tre locus and analysis of trehalose cryoprotection in Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2006) 0.99
Functional and phenotypic characterization of a protein from Lactobacillus acidophilus involved in cell morphology, stress tolerance and adherence to intestinal cells. Microbiology (2010) 0.98
Genome sequence and characteristics of Lrm1, a prophage from industrial Lactobacillus rhamnosus strain M1. Appl Environ Microbiol (2008) 0.98
Identification and phenotypic characterization of the cell-division protein CdpA. Gene (2004) 0.97
Genetic analysis of two bile salt hydrolase activities in Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2005) 0.97
Analysis of treatment effects on the microbial ecology of the human intestine. FEMS Microbiol Ecol (2006) 0.96
Dissimilar properties of two recombinant Lactobacillus acidophilus strains displaying Salmonella FliC with different anchoring motifs. Appl Environ Microbiol (2011) 0.95
Bacteriophage defense systems and strategies for lactic acid bacteria. Adv Appl Microbiol (2004) 0.95
A rendezvous with our microbes. Proc Natl Acad Sci U S A (2011) 0.95
Assessment of Lactobacillus gasseri as a candidate oral vaccine vector. Clin Vaccine Immunol (2011) 0.94
Transcriptional and functional analysis of galactooligosaccharide uptake by lacS in Lactobacillus acidophilus. Proc Natl Acad Sci U S A (2011) 0.94
Identification and characterization of Leuconostoc fallax strains isolated from an industrial sauerkraut fermentation. Appl Environ Microbiol (2002) 0.94
Targeted expression of anthrax protective antigen by Lactobacillus gasseri as an anthrax vaccine. Future Microbiol (2010) 0.94
Expression of a heterologous manganese superoxide dismutase gene in intestinal lactobacilli provides protection against hydrogen peroxide toxicity. Appl Environ Microbiol (2004) 0.94
Marker-free chromosomal integration of the manganese superoxide dismutase gene (sodA) from Streptococcus thermophilus into Lactobacillus gasseri. FEMS Microbiol Lett (2005) 0.90
Directed chromosomal integration and expression of the reporter gene gusA3 in Lactobacillus acidophilus NCFM. Appl Environ Microbiol (2011) 0.90
Genomic features of Lactobacillus species. Front Biosci (Landmark Ed) (2009) 0.88
Transcriptional analysis of prebiotic uptake and catabolism by Lactobacillus acidophilus NCFM. PLoS One (2012) 0.87
Specific Lactobacillus species differentially activate Toll-like receptors and downstream signals in dendritic cells. Expert Rev Vaccines (2008) 0.86
Antisense RNA targeting of primase interferes with bacteriophage replication in Streptococcus thermophilus. Appl Environ Microbiol (2004) 0.85
A functional glycogen biosynthesis pathway in Lactobacillus acidophilus: expression and analysis of the glg operon. Mol Microbiol (2013) 0.85
Insights into glycogen metabolism in Lactobacillus acidophilus: impact on carbohydrate metabolism, stress tolerance and gut retention. Microb Cell Fact (2014) 0.85
Lactococcus lactis lytic bacteriophages of the P335 group are inhibited by overexpression of a truncated CI repressor. J Bacteriol (2002) 0.84
Modification of Lactobacillus beta-glucuronidase activity by random mutagenesis. Gene (2006) 0.83
Effects of genetic, processing, or product formulation changes on efficacy and safety of probiotics. Ann N Y Acad Sci (2014) 0.83
New insights into probiotic mechanisms: a harvest from functional and metagenomic studies. Gut Microbes (2012) 0.83
The impact of omic technologies on the study of food microbes. Annu Rev Food Sci Technol (2011) 0.83
Impact of genomics on the field of probiotic research: historical perspectives to modern paradigms. Antonie Van Leeuwenhoek (2014) 0.82
Lactic acid production by Streptococcus thermophilus alters Clostridium difficile infection and in vitro Toxin A production. Gut Microbes (2012) 0.82
Genetic mechanisms of prebiotic oligosaccharide metabolism in probiotic microbes. Annu Rev Food Sci Technol (2014) 0.81
Relevance and application of sortase and sortase-dependent proteins in lactic acid bacteria. Front Microbiol (2013) 0.81
Molecular characterization and functional analysis of the manganese-containing superoxide dismutase gene (sodA) from Streptococcus thermophilus AO54. Arch Biochem Biophys (2003) 0.81
Transcriptional analysis of oligosaccharide utilization by Bifidobacterium lactis Bl-04. BMC Genomics (2013) 0.80
Improving lactose digestion and symptoms of lactose intolerance with a novel galacto-oligosaccharide (RP-G28): a randomized, double-blind clinical trial. Nutr J (2013) 0.79
Influence of exposure time on gene expression by human intestinal epithelial cells exposed to Lactobacillus acidophilus. Appl Environ Microbiol (2012) 0.79
Plasmid transduction using bacteriophage Phi(adh) for expression of CC chemokines by Lactobacillus gasseri ADH. Appl Environ Microbiol (2010) 0.78
Genetics of streptococci, lactococci, and enterococci: review of the sixth international conference. J Bacteriol (2002) 0.78
Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis. Genes Nutr (2010) 0.78
Integrative food grade expression system for lactic acid bacteria. Methods Mol Biol (2011) 0.78
Inhibition of bacteriophage replication in Streptococcus thermophilus by subunit poisoning of primase. Microbiology (2007) 0.75