Published in Nucleus on July 27, 2012
Control of heterochromatin localization and silencing by the nuclear membrane protein Lem2. Genes Dev (2016) 1.50
DNA replication timing. Cold Spring Harb Perspect Biol (2013) 1.38
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Fission yeast Lem2 and Man1 perform fundamental functions of the animal cell nuclear lamina. Nucleus (2012) 1.03
ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo. Nat Commun (2015) 1.01
The nuclear envelope LEM-domain protein emerin. Nucleus (2013) 0.99
Dam it's good! DamID profiling of protein-DNA interactions. Wiley Interdiscip Rev Dev Biol (2015) 0.87
Transcriptional regulation at the yeast nuclear envelope. Nucleus (2013) 0.86
The Fun30 chromatin remodeler Fft3 controls nuclear organization and chromatin structure of insulators and subtelomeres in fission yeast. PLoS Genet (2015) 0.83
Chromosome domain architecture and dynamic organization of the fission yeast genome. FEBS Lett (2015) 0.81
Comparative 3D genome structure analysis of the fission and the budding yeast. PLoS One (2015) 0.81
Telomeric repeats facilitate CENP-A(Cnp1) incorporation via telomere binding proteins. PLoS One (2013) 0.80
Subnuclear relocalization and silencing of a chromosomal region by an ectopic ribosomal DNA repeat. Proc Natl Acad Sci U S A (2013) 0.79
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Regulating retrotransposon activity through the use of alternative transcription start sites. EMBO Rep (2016) 0.77
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Females and males contribute in opposite ways to the evolution of gene order in Drosophila. PLoS One (2013) 0.76
The Inner Nuclear Membrane Protein Src1 Is Required for Stable Post-Mitotic Progression into G1 in Aspergillus nidulans. PLoS One (2015) 0.76
The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1. Mol Cell (2017) 0.75
Beyond Tethering and the LEM domain: MSCellaneous functions of the inner nuclear membrane Lem2. Nucleus (2016) 0.75
Insights from space: potential role of diet in the spatial organization of chromosomes. Nutrients (2014) 0.75
Design (and) principles of nuclear dynamics in Stockholm. Nucleus (2015) 0.75
Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet (2006) 11.02
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions. Nature (2008) 10.95
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell (2010) 9.50
Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation. Mol Cell (2010) 6.71
A promoter-level mammalian expression atlas. Nature (2014) 6.25
Comparative functional genomics of the fission yeasts. Science (2011) 6.00
Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing. Nat Genet (2002) 4.68
Genomic binding by the Drosophila Myc, Max, Mad/Mnt transcription factor network. Genes Dev (2003) 4.68
Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogaster. Nat Genet (2006) 3.83
Characterization of the Drosophila melanogaster genome at the nuclear lamina. Nat Genet (2006) 3.44
Genome-wide profiling of DNA methylation reveals transposon targets of CHROMOMETHYLASE3. Curr Biol (2002) 3.37
Genome architecture: domain organization of interphase chromosomes. Cell (2013) 3.13
Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster. Proc Natl Acad Sci U S A (2006) 3.06
Single-cell dynamics of genome-nuclear lamina interactions. Cell (2013) 3.03
RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing. Genes Dev (2005) 2.99
Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex. Genes Dev (2006) 2.73
Prospero acts as a binary switch between self-renewal and differentiation in Drosophila neural stem cells. Dev Cell (2006) 2.69
Sin3: a flexible regulator of global gene expression and genome stability. Curr Genet (2004) 2.60
Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae. Nat Struct Mol Biol (2010) 2.40
Chromatin position effects assayed by thousands of reporters integrated in parallel. Cell (2013) 2.16
Detection of in vivo protein-DNA interactions using DamID in mammalian cells. Nat Protoc (2007) 2.05
Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence. Genome Res (2012) 2.04
Dicer is required for chromosome segregation and gene silencing in fission yeast cells. Proc Natl Acad Sci U S A (2002) 1.97
Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location. Genes Dev (2003) 1.96
A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. Curr Biol (2010) 1.86
Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions. Mol Cell (2006) 1.86
Functional divergence between histone deacetylases in fission yeast by distinct cellular localization and in vivo specificity. Mol Cell Biol (2002) 1.84
Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast. EMBO J (2005) 1.83
Interactions among Polycomb domains are guided by chromosome architecture. PLoS Genet (2011) 1.76
Retracted RNA-interference-directed chromatin modification coupled to RNA polymerase II transcription. Nature (2005) 1.72
Human heterochromatin proteins form large domains containing KRAB-ZNF genes. Genome Res (2006) 1.72
Splicing factors facilitate RNAi-directed silencing in fission yeast. Science (2008) 1.65
A genome-wide role for CHD remodelling factors and Nap1 in nucleosome disassembly. EMBO J (2007) 1.59
High-resolution mapping reveals links of HP1 with active and inactive chromatin components. PLoS Genet (2007) 1.59
Genome-nuclear lamina interactions and gene regulation. Curr Opin Cell Biol (2010) 1.55
DamID: mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase. Methods Enzymol (2006) 1.52
The CHD remodeling factor Hrp1 stimulates CENP-A loading to centromeres. Nucleic Acids Res (2005) 1.50
Histone H1 binding is inhibited by histone variant H3.3. EMBO J (2009) 1.47
Glucosylated hydroxymethyluracil, DNA base J, prevents transcriptional readthrough in Leishmania. Cell (2012) 1.46
Genome-wide HP1 binding in Drosophila: developmental plasticity and genomic targeting signals. Genome Res (2005) 1.46
Global chromatin domain organization of the Drosophila genome. PLoS Genet (2008) 1.45
Histone modification patterns and epigenetic codes. Biochim Biophys Acta (2009) 1.45
A NASP (N1/N2)-related protein, Sim3, binds CENP-A and is required for its deposition at fission yeast centromeres. Mol Cell (2007) 1.44
A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift. Yeast (2004) 1.38
HAT-HDAC interplay modulates global histone H3K14 acetylation in gene-coding regions during stress. EMBO Rep (2009) 1.37
Analysis of the DNA methylome and transcriptome in granulopoiesis reveals timed changes and dynamic enhancer methylation. Blood (2014) 1.36
Alp13, an MRG family protein, is a component of fission yeast Clr6 histone deacetylase required for genomic integrity. EMBO J (2003) 1.35
Distinct centromere domain structures with separate functions demonstrated in live fission yeast cells. J Cell Sci (2003) 1.34
Topoisomerase I regulates open chromatin and controls gene expression in vivo. EMBO J (2010) 1.28
ago1 and dcr1, two core components of the RNA interference pathway, functionally diverge from rdp1 in regulating cell cycle events in Schizosaccharomyces pombe. Mol Biol Cell (2003) 1.28
HP1 controls genomic targeting of four novel heterochromatin proteins in Drosophila. EMBO J (2007) 1.27
Cell-cycle regulation of cohesin stability along fission yeast chromosomes. EMBO J (2007) 1.25
CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe. EMBO J (2012) 1.25
Identification of noncoding transcripts from within CENP-A chromatin at fission yeast centromeres. J Biol Chem (2011) 1.23
The chromatin-remodeling factor FACT contributes to centromeric heterochromatin independently of RNAi. Curr Biol (2007) 1.21
Reassessing the abundance of H3K9me2 chromatin domains in embryonic stem cells. Nat Genet (2010) 1.20
Specific functions for the fission yeast Sirtuins Hst2 and Hst4 in gene regulation and retrotransposon silencing. EMBO J (2007) 1.18
Bayesian network analysis of targeting interactions in chromatin. Genome Res (2009) 1.17
Epigenetics: heterochromatin meets RNAi. Cell Res (2009) 1.17
Prognostic DNA methylation patterns in cytogenetically normal acute myeloid leukemia are predefined by stem cell chromatin marks. Blood (2011) 1.15
SUUR joins separate subsets of PcG, HP1 and B-type lamin targets in Drosophila. J Cell Sci (2007) 1.14
Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA. EMBO J (2009) 1.14
A network model of the molecular organization of chromatin in Drosophila. Mol Cell (2013) 1.13
Chromatin domains in higher eukaryotes: insights from genome-wide mapping studies. Chromosoma (2008) 1.12
Linking cohesin to gene regulation. Cell (2008) 1.11
The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains. PLoS Genet (2009) 1.10
The insulator protein SU(HW) fine-tunes nuclear lamina interactions of the Drosophila genome. PLoS One (2010) 1.09
Histone modifications: from genome-wide maps to functional insights. Genome Biol (2005) 1.08
Genome-wide patterns of histone modifications in fission yeast. Chromosome Res (2006) 1.08
The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation. PLoS Genet (2011) 1.06
Genome-wide mapping of nucleosome positions in Schizosaccharomyces pombe. Methods (2009) 1.05
The genomic landscape of the somatic linker histone subtypes H1.1 to H1.5 in human cells. Cell Rep (2013) 1.04
Interaction of Epe1 with the heterochromatin assembly pathway in Schizosaccharomyces pombe. Genetics (2007) 1.03
High-resolution mapping of heterochromatin redistribution in a Drosophila position-effect variegation model. Epigenetics Chromatin (2009) 1.03
Mapping of lamin A- and progerin-interacting genome regions. Chromosoma (2012) 1.01
A new role for the transcriptional corepressor SIN3; regulation of centromeres. Curr Biol (2003) 0.97
Podbat: a novel genomic tool reveals Swr1-independent H2A.Z incorporation at gene coding sequences through epigenetic meta-analysis. PLoS Comput Biol (2011) 0.95
Hrp3, a chromodomain helicase/ATPase DNA binding protein, is required for heterochromatin silencing in fission yeast. Biochem Biophys Res Commun (2002) 0.94
Fission yeast Iec1-ino80-mediated nucleosome eviction regulates nucleotide and phosphate metabolism. Mol Cell Biol (2009) 0.94
Individual subunits of the Ssn6-Tup11/12 corepressor are selectively required for repression of different target genes. Mol Cell Biol (2006) 0.92
Factors that promote H3 chromatin integrity during transcription prevent promiscuous deposition of CENP-A(Cnp1) in fission yeast. PLoS Genet (2012) 0.92
The endoplasmic reticulum cation P-type ATPase Cta4p is required for control of cell shape and microtubule dynamics. J Cell Biol (2002) 0.92
Chromatin organization: form to function. Curr Opin Genet Dev (2012) 0.91
Differential programming of B cells in AID deficient mice. PLoS One (2013) 0.91
Topoisomerases, chromatin and transcription termination. Transcription (2011) 0.91
Chd1 remodelers maintain open chromatin and regulate the epigenetics of differentiation. Exp Cell Res (2010) 0.90
Whole-genome views of chromatin structure. Chromosome Res (2005) 0.90
Mediator promotes CENP-a incorporation at fission yeast centromeres. Mol Cell Biol (2012) 0.89
Chromatin immunoprecipitation using microarrays. Methods Mol Biol (2009) 0.89
High-throughput transcription profiling identifies putative epigenetic regulators of hematopoiesis. Blood (2014) 0.89
A chromatin-remodeling protein is a component of fission yeast mediator. J Biol Chem (2010) 0.88
Centromere domain organization and histone modifications. Braz J Med Biol Res (2002) 0.87
Genome-wide studies of histone demethylation catalysed by the fission yeast homologues of mammalian LSD1. PLoS One (2007) 0.86
Transcriptional regulation at the yeast nuclear envelope. Nucleus (2013) 0.86
A novel type of silencing factor, Clr2, is necessary for transcriptional silencing at various chromosomal locations in the fission yeast Schizosaccharomyces pombe. Nucleic Acids Res (2004) 0.83
Genome-wide mapping of histone modifications and mass spectrometry reveal H4 acetylation bias and H3K36 methylation at gene promoters in fission yeast. Epigenomics (2010) 0.82
Heterochromatin tells CENP-A where to go. Bioessays (2008) 0.81
Molecular biology. The paradox of silent heterochromatin. Science (2008) 0.80