Published in FEMS Microbiol Ecol on February 16, 2012
Distributions of microbial activities in deep subseafloor sediments. Science (2004) 4.45
Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature (2008) 3.69
Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin. Proc Natl Acad Sci U S A (2006) 3.34
Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria. Appl Environ Microbiol (2005) 2.55
North Pacific seasonality and the glaciation of North America 2.7 million years ago. Nature (2005) 2.20
Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field. Environ Microbiol (2005) 1.92
Analytical methodology for TEX86 paleothermometry by high-performance liquid chromatography/atmospheric pressure chemical ionization-mass spectrometry. Anal Chem (2007) 1.72
Microbial communities from methane hydrate-bearing deep marine sediments in a forearc basin. Appl Environ Microbiol (2002) 1.67
Evidence for microbial carbon and sulfur cycling in deeply buried ridge flank basalt. Science (2013) 1.60
Metagenomic profiling: microarray analysis of an environmental genomic library. Appl Environ Microbiol (2003) 1.53
Isolation and phylogenetic diversity of members of previously uncultivated epsilon-Proteobacteria in deep-sea hydrothermal fields. FEMS Microbiol Lett (2003) 1.48
Variability in microbial community and venting chemistry in a sediment-hosted backarc hydrothermal system: Impacts of subseafloor phase-separation. FEMS Microbiol Ecol (2005) 1.42
Sulfurimonas paralvinellae sp. nov., a novel mesophilic, hydrogen- and sulfur-oxidizing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent polychaete nest, reclassification of Thiomicrospira denitrificans as Sulfurimonas denitrificans comb. nov. and emended description of the genus Sulfurimonas. Int J Syst Evol Microbiol (2006) 1.40
Carbon and nitrogen assimilation in deep subseafloor microbial cells. Proc Natl Acad Sci U S A (2011) 1.40
Stimulation of microbial urea hydrolysis in groundwater to enhance calcite precipitation. Environ Sci Technol (2008) 1.34
Discriminative detection and enumeration of microbial life in marine subsurface sediments. ISME J (2009) 1.25
Hydrogen-driven subsurface lithoautotrophic microbial ecosystems (SLiMEs): do they exist and why should we care? Trends Microbiol (2005) 1.24
Nitratiruptor tergarcus gen. nov., sp. nov. and Nitratifractor salsuginis gen. nov., sp. nov., nitrate-reducing chemolithoautotrophs of the epsilon-Proteobacteria isolated from a deep-sea hydrothermal system in the Mid-Okinawa Trough. Int J Syst Evol Microbiol (2005) 1.22
Molecular quantification of environmental DNA using microfluidics and digital PCR. Syst Appl Microbiol (2012) 1.21
Isolation of a methanogen from deep marine sediments that contain methane hydrates, and description of Methanoculleus submarinus sp. nov. Appl Environ Microbiol (2003) 1.21
Induction of lupus autoantibodies by adjuvants. J Autoimmun (2003) 1.18
Dehalogenation activities and distribution of reductive dehalogenase homologous genes in marine subsurface sediments. Appl Environ Microbiol (2009) 1.18
Archaeal diversity and distribution along thermal and geochemical gradients in hydrothermal sediments at the Yonaguni Knoll IV hydrothermal field in the Southern Okinawa trough. Appl Environ Microbiol (2009) 1.15
Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula. Extremophiles (2008) 1.14
Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems. Appl Environ Microbiol (2004) 1.12
Bacterial community shift along a subsurface geothermal water stream in a Japanese gold mine. Extremophiles (2005) 1.11
Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments. Environ Microbiol (2005) 1.09
Microbial community in black rust exposed to hot ridge flank crustal fluids. Appl Environ Microbiol (2006) 1.09
Cultivation of methanogenic community from subseafloor sediments using a continuous-flow bioreactor. ISME J (2011) 1.08
Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine. Appl Environ Microbiol (2002) 1.08
Anaerobic oxidation of methane: mechanisms, bioenergetics, and the ecology of associated microorganisms. Environ Sci Technol (2008) 1.02
Microbial activity in the marine deep biosphere: progress and prospects. Front Microbiol (2013) 0.99
Diversity of oxygenase genes from methane- and ammonia-oxidizing bacteria in the Eastern Snake River Plain aquifer. Appl Environ Microbiol (2005) 0.97
Biogeochemistry. Downsizing the deep biosphere. Science (2012) 0.96
Phylogenetic diversity of sulfate-reducing prokaryotes in active deep-sea hydrothermal vent chimney structures. FEMS Microbiol Lett (2004) 0.94
Archaeoglobus sulfaticallidus sp. nov., a thermophilic and facultatively lithoautotrophic sulfate-reducer isolated from black rust exposed to hot ridge flank crustal fluids. Int J Syst Evol Microbiol (2010) 0.93
Spatial variations in microbial community composition in surface seawater from the ultra-oligotrophic center to rim of the South Pacific Gyre. PLoS One (2013) 0.91
Cell-specific thioautotrophic productivity of epsilon-proteobacterial epibionts associated with Shinkaia crosnieri. PLoS One (2012) 0.89
Population turnover in a Microcystis bloom results in predominantly nontoxigenic variants late in the season. Appl Environ Microbiol (2010) 0.89
Metabolically active microbial communities in marine sediment under high-CO(2) and low-pH extremes. ISME J (2012) 0.88
Sunxiuqinia faeciviva sp. nov., a facultatively anaerobic organoheterotroph of the Bacteroidetes isolated from deep subseafloor sediment. Int J Syst Evol Microbiol (2012) 0.87
An improved cell separation technique for marine subsurface sediments: applications for high-throughput analysis using flow cytometry and cell sorting. Environ Microbiol (2013) 0.87
Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment. Int J Syst Evol Microbiol (2013) 0.87
Microbial characterization of basalt formation waters targeted for geological carbon sequestration. FEMS Microbiol Ecol (2013) 0.86
Thioreductor micantisoli gen. nov., sp. nov., a novel mesophilic, sulfur-reducing chemolithoautotroph within the epsilon-Proteobacteria isolated from hydrothermal sediments in the Mid-Okinawa Trough. Int J Syst Evol Microbiol (2005) 0.85
Biochemical and molecular characterization of a tetrachloroethene dechlorinating Desulfitobacterium sp. strain Y51: a review. J Ind Microbiol Biotechnol (2005) 0.85
Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer. Int J Syst Evol Microbiol (2010) 0.84
Geofilum rubicundum gen. nov., sp. nov., isolated from deep subseafloor sediment. Int J Syst Evol Microbiol (2011) 0.84
Characterization of Metabolically Active Bacterial Populations in Subseafloor Nankai Trough Sediments above, within, and below the Sulfate-Methane Transition Zone. Front Microbiol (2012) 0.83
Functional characterization of the trigger factor protein PceT of tetrachloroethene-dechlorinating Desulfitobacterium hafniense Y51. Appl Microbiol Biotechnol (2009) 0.83
Stimulation of expression of a silica-induced protein (Sip) in Thermus thermophilus by supersaturated silicic acid. Appl Environ Microbiol (2009) 0.83
Comparative study of subseafloor microbial community structures in deeply buried coral fossils and sediment matrices from the challenger mound in the porcupine seabight. Front Microbiol (2011) 0.83
Temporal and spatial distributions of contaminants in sediments of Santa Monica Bay, California. Mar Environ Res (2003) 0.82
Substrate-specific pressure-dependence of microbial sulfate reduction in deep-sea cold seep sediments of the Japan Trench. Front Microbiol (2012) 0.82
Detection of Euryarchaeota and Crenarchaeota in an oxic basalt aquifer. FEMS Microbiol Ecol (2003) 0.82
Hot-alkaline DNA extraction method for deep-subseafloor archaeal communities. Appl Environ Microbiol (2014) 0.81
Hydrogenivirga caldilitoris gen. nov., sp. nov., a novel extremely thermophilic, hydrogen- and sulfur-oxidizing bacterium from a coastal hydrothermal field. Int J Syst Evol Microbiol (2004) 0.81
Proteomic and targeted qPCR analyses of subsurface microbial communities for presence of methane monooxygenase. Biodegradation (2011) 0.80
Distribution of intact and core membrane lipids of archaeal glycerol dialkyl glycerol tetraethers among size-fractionated particulate organic matter in hood canal, puget sound. Appl Environ Microbiol (2012) 0.80
Transcriptomic analysis of temperature responses of Aspergillus kawachii during barley koji production. Appl Environ Microbiol (2015) 0.79
Subseafloor microbial communities in methane hydrate-bearing sediment at two distinct locations (ODP Leg204) in the cascadia margin. Microbes Environ (2008) 0.79
Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone. Philos Trans R Soc Lond B Biol Sci (2013) 0.78
Phylogenetic Diversity of aprA Genes in Subseafloor Sediments on the Northwestern Pacific Margin off Japan. Microbes Environ (2015) 0.78
A comparative study of microbial diversity and community structure in marine sediments using poly(A) tailing and reverse transcription-PCR. Front Microbiol (2013) 0.78
Thiobacter subterraneus gen. nov., sp. nov., an obligately chemolithoautotrophic, thermophilic, sulfur-oxidizing bacterium from a subsurface hot aquifer. Int J Syst Evol Microbiol (2005) 0.78
A new DNA extraction method by controlled alkaline treatments from consolidated subsurface sediments. FEMS Microbiol Lett (2011) 0.77
Intact preservation of environmental samples by freezing under an alternating magnetic field. Environ Microbiol Rep (2015) 0.77
Low frequency of endospore-specific genes in subseafloor sedimentary metagenomes. Environ Microbiol Rep (2015) 0.77
Molecular phylogenetic and chemical analyses of the microbial mats in deep-sea cold seep sediments at the northeastern Japan Sea. Extremophiles (2006) 0.76
Field evidence for co-metabolism of trichloroethene stimulated by addition of electron donor to groundwater. Environ Sci Technol (2010) 0.76
Thiofractor thiocaminus gen. nov., sp. nov., a novel hydrogen-oxidizing, sulfur-reducing epsilonproteobacterium isolated from a deep-sea hydrothermal vent chimney in the Nikko Seamount field of the northern Mariana Arc. Arch Microbiol (2012) 0.76
Total degradation of pentachloroethane by an engineered Alcaligenes strain expressing a modified camphor monooxygenase and a hybrid dioxygenase. Biosci Biotechnol Biochem (2004) 0.75
Radical gas-based DNA decontamination for ultra-sensitive molecular experiments. Microbes Environ (2012) 0.75
Correction: Application of Stochastic Labeling with Random-Sequence Barcodes for Simultaneous Quantification and Sequencing of Environmental 16S rRNA Genes. PLoS One (2017) 0.75
[Biochemical and genetic bases of chloroethene-dehalorespiring bacteria]. Tanpakushitsu Kakusan Koso (2005) 0.75
A method for upscaling soil parameters for use in a dynamic modelling assessment of water quality in the Pyrenees. Sci Total Environ (2008) 0.75
Construction of a ligD disruptant for efficient gene targeting in white koji mold, Aspergillus kawachii. J Gen Appl Microbiol (2013) 0.75
Variability of subseafloor viral abundance at the geographically and geologically distinct continental margins. FEMS Microbiol Ecol (2013) 0.75
Marker recycling system using the sC gene in the white koji mold, Aspergillus luchuensis mut. kawachii. J Gen Appl Microbiol (2016) 0.75