Published in BMC Genomics on January 25, 2012
Computational tools for prioritizing candidate genes: boosting disease gene discovery. Nat Rev Genet (2012) 2.92
Transcriptome profiling of microRNA by Next-Gen deep sequencing reveals known and novel miRNA species in the lipid fraction of human breast milk. PLoS One (2013) 1.17
Transcriptional profiling of mammary gland in Holstein cows with extremely different milk protein and fat percentage using RNA sequencing. BMC Genomics (2014) 1.09
Identification of novel transcripts and noncoding RNAs in bovine skin by deep next generation sequencing. BMC Genomics (2013) 1.09
RNA-seq analysis of single bovine blastocysts. BMC Genomics (2013) 0.99
Comparison of five different RNA sources to examine the lactating bovine mammary gland transcriptome using RNA-Sequencing. Sci Rep (2014) 0.98
A novel highly divergent protein family identified from a viviparous insect by RNA-seq analysis: a potential target for tsetse fly-specific abortifacients. PLoS Genet (2014) 0.97
Characterization and comparative analyses of muscle transcriptomes in Dorper and small-tailed Han sheep using RNA-Seq technique. PLoS One (2013) 0.95
Predicting the important enzymes in human breast milk digestion. J Agric Food Chem (2014) 0.92
Sequencing the transcriptome of milk production: milk trumps mammary tissue. BMC Genomics (2013) 0.92
Peptidomic profile of milk of Holstein cows at peak lactation. J Agric Food Chem (2013) 0.90
Amelioration of reproduction-associated oxidative stress in a viviparous insect is critical to prevent reproductive senescence. PLoS One (2014) 0.89
Time-dependent expression profiles of microRNAs and mRNAs in rat milk whey. PLoS One (2014) 0.89
Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing. BMC Genomics (2014) 0.89
Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing. BMC Genomics (2013) 0.88
Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle. BMC Genomics (2014) 0.85
Proteolytic Systems in Milk: Perspectives on the Evolutionary Function within the Mammary Gland and the Infant. J Mammary Gland Biol Neoplasia (2015) 0.85
Endogenous human milk peptide release is greater after preterm birth than term birth. J Nutr (2014) 0.85
Genes regulating lipid and protein metabolism are highly expressed in mammary gland of lactating dairy goats. Funct Integr Genomics (2014) 0.83
Characterization and Comparative Analysis of the Milk Transcriptome in Two Dairy Sheep Breeds using RNA Sequencing. Sci Rep (2015) 0.83
Multi-tissue omics analyses reveal molecular regulatory networks for puberty in composite beef cattle. PLoS One (2014) 0.82
Characterization of transcriptional complexity during adipose tissue development in bovines of different ages and sexes. PLoS One (2014) 0.82
Comprehensive RNA-Seq profiling to evaluate lactating sheep mammary gland transcriptome. Sci Data (2016) 0.81
Functional development of the adult ovine mammary gland--insights from gene expression profiling. BMC Genomics (2015) 0.80
Application of Top-Down and Bottom-up Systems Approaches in Ruminant Physiology and Metabolism. Curr Genomics (2012) 0.79
De Novo Transcriptome Assembly and Differential Gene Expression Profiling of Three Capra hircus Skin Types during Anagen of the Hair Growth Cycle. Int J Genomics (2013) 0.79
Peptidomic analysis of healthy and subclinically mastitic bovine milk. Int Dairy J (2015) 0.79
Characterization of the Transcriptional Complexity of the Receptive and Pre-receptive Endometria of Dairy Goats. Sci Rep (2015) 0.79
Go with the flow-biology and genetics of the lactation cycle. Front Genet (2015) 0.78
Mammary epithelial cells isolated from milk are a valuable, non-invasive source of mammary transcripts. Front Genet (2015) 0.78
RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk. BMC Vet Res (2016) 0.77
Transcriptome adaptation of the bovine mammary gland to diets rich in unsaturated fatty acids shows greater impact of linseed oil over safflower oil on gene expression and metabolic pathways. BMC Genomics (2016) 0.77
Single Nucleotide Polymorphism Discovery in Bovine Pituitary Gland Using RNA-Seq Technology. PLoS One (2016) 0.76
Characterizing Milk Production Related Genes in Holstein Using RNA-seq. Asian-Australas J Anim Sci (2016) 0.76
Co-Expression Network and Pathway Analyses Reveal Important Modules of miRNAs Regulating Milk Yield and Component Traits. Int J Mol Sci (2017) 0.75
Identification of Genetic Associations and Functional Polymorphisms of SAA1 Gene Affecting Milk Production Traits in Dairy Cattle. PLoS One (2016) 0.75
Wilson Disease: Epigenetic effects of choline supplementation on phenotype and clinical course in a mouse model. Epigenetics (2016) 0.75
Elucidating fish oil-induced milk fat depression in dairy sheep: Milk somatic cell transcriptome analysis. Sci Rep (2017) 0.75
DNA methylation and transcription in a distal region upstream from the bovine AlphaS1 casein gene after once or twice daily milking. PLoS One (2014) 0.75
Brown Norway chromosome 1 congenic reduces symptoms of renal disease in fatty Zucker rats. PLoS One (2014) 0.75
Transcript profiling in the milk of dairy ewes fed extruded linseed. Genom Data (2016) 0.75
EST sequencing and gene expression profiling in Scutellaria baicalensis. EXCLI J (2014) 0.75
Enzymes in Human Milk. Nestle Nutr Inst Workshop Ser (2017) 0.75
Relative gene expression of fatty acid synthesis genes at 60 days postpartum in bovine mammary epithelial cells of Surti and Jafarabadi buffaloes. Vet World (2017) 0.75
Using RNA sequencing to identify putative competing endogenous RNAs (ceRNAs) potentially regulating fat metabolism in bovine liver. Sci Rep (2017) 0.75
Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods (2008) 126.81
Accurate whole human genome sequencing using reversible terminator chemistry. Nature (2008) 90.20
High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Res (2008) 13.51
Evidence based selection of housekeeping genes. PLoS One (2007) 7.90
An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data. PLoS Comput Biol (2009) 7.47
Trypan blue exclusion test of cell viability. Curr Protoc Immunol (2001) 3.88
Gene expression profiling of mammary gland development reveals putative roles for death receptors and immune mediators in post-lactational regression. Breast Cancer Res (2003) 2.29
Key stages in mammary gland development. Secretory activation in the mammary gland: it's not just about milk protein synthesis! Breast Cancer Res (2007) 2.15
Gene networks driving bovine milk fat synthesis during the lactation cycle. BMC Genomics (2008) 1.98
The anaphase-promoting complex: a key factor in the regulation of cell cycle. Oncogene (2005) 1.85
Recent advances on structure, metabolism, and function of human milk oligosaccharides. J Nutr (2006) 1.65
Bovine milk glycome. J Dairy Sci (2008) 1.56
Nomenclature of the proteins of cows' milk--sixth revision. J Dairy Sci (2004) 1.55
Regulation of milk protein gene expression. Annu Rev Nutr (1999) 1.55
Recent insights into stearoyl-CoA desaturase-1. Curr Opin Lipidol (2003) 1.52
Heavy chain ferritin acts as an antiapoptotic gene that protects livers from ischemia reperfusion injury. FASEB J (2003) 1.42
Gene expression in the human mammary epithelium during lactation: the milk fat globule transcriptome. Physiol Genomics (2008) 1.28
Invited review: milk protein polymorphisms in cattle: effect on animal breeding and human nutrition. J Dairy Sci (2009) 1.24
Gene regulatory networks in lactation: identification of global principles using bioinformatics. BMC Syst Biol (2007) 1.23
Onset of lactation in the bovine mammary gland: gene expression profiling indicates a strong inhibition of gene expression in cell proliferation. Funct Integr Genomics (2008) 1.21
Potential uses of milk epithelial cells: a review. Reprod Nutr Dev (2002) 1.21
Developmental expression of osteopontin (OPN) mRNA in rat tissues: evidence for a role for OPN in bone formation and resorption. Matrix (1993) 1.11
Apoptosis in mammary gland and cancer. Endocr Relat Cancer (2000) 1.10
Bioactive components in milk. Curr Opin Clin Nutr Metab Care (2002) 1.09
IgE and IgG binding epitopes on alpha-lactalbumin and beta-lactoglobulin in cow's milk allergy. Int Arch Allergy Immunol (2001) 1.03
CD24, a signal-transducing molecule expressed on human B lymphocytes, is a marker for human regenerating muscle. Acta Neuropathol (1993) 1.02
Transcriptome profiling of bovine milk oligosaccharide metabolism genes using RNA-sequencing. PLoS One (2011) 1.01
Milk biologically active components as nutraceuticals: review. Crit Rev Food Sci Nutr (2005) 1.01
Protection of neurons from apoptosis by apolipoprotein E-containing lipoproteins does not require lipoprotein uptake and involves activation of phospholipase Cgamma1 and inhibition of calcineurin. J Biol Chem (2009) 0.98
Incorporation of orally applied (13)C-galactose into milk lactose and oligosaccharides. Glycobiology (2006) 0.96
Synthesis of long-chain polyunsaturated fatty acids in lactating mammary gland: role of Delta5 and Delta6 desaturases, SREBP-1, PPARalpha, and PGC-1. J Lipid Res (2005) 0.95
OMICS-rooted studies of milk proteins, oligosaccharides and lipids. J Proteomics (2009) 0.94
Design of selective, ATP-competitive inhibitors of Akt. J Med Chem (2010) 0.93
Plasmin system and microbial proteases in milk: characteristics, roles, and relationship. J Agric Food Chem (2002) 0.92
A functional genomics approach to evaluate candidate genes located in a QTL interval for milk production traits on BTA6. Anim Genet (2009) 0.91
Local control of mammary development and function. Rev Reprod (1998) 0.90
Changes in physical properties of bovine milk from the colostrum period to early lactation. J Dairy Sci (2007) 0.88
Regulation of oxytocin receptor responsiveness by G protein-coupled receptor kinase 6 in human myometrial smooth muscle. Mol Endocrinol (2009) 0.88
Ubiquitin proteasome pathway gene expression varies in rhesus monkey oocytes and embryos of different developmental potential. Physiol Genomics (2007) 0.86
Designer milk. Adv Food Nutr Res (2007) 0.86
Oxytocin stimulates secretory processes in lactating rabbit mammary epithelial cells. J Physiol (2005) 0.82
Lactation and metabolic responses to graded abomasal doses of methionine and lysine in cows fed grass silage diets. J Dairy Sci (1999) 0.80
The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nat Genet (2004) 9.37
The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (2009) 8.23
Real-time PCR for mRNA quantitation. Biotechniques (2005) 7.80
The nature and identification of quantitative trait loci: a community's view. Nat Rev Genet (2003) 3.96
The bovine lactation genome: insights into the evolution of mammalian milk. Genome Biol (2009) 1.77
SNP discovery in the bovine milk transcriptome using RNA-Seq technology. Mamm Genome (2010) 1.52
Characterization of bacteria in biopsies of colon and stools by high throughput sequencing of the V2 region of bacterial 16S rRNA gene in human. PLoS One (2011) 1.25
Comparison of gene coverage of mouse oligonucleotide microarray platforms. BMC Genomics (2006) 1.19
Fine mapping reveals sex bias in quantitative trait loci affecting growth, skeletal size and obesity-related traits on mouse chromosomes 2 and 11. Genetics (2006) 1.09
Dissection of a genetically complex cluster of growth and obesity QTLs on mouse chromosome 2 using subcongenic intercrosses. Mamm Genome (2007) 1.05
Glycosylation of human milk lactoferrin exhibits dynamic changes during early lactation enhancing its role in pathogenic bacteria-host interactions. Mol Cell Proteomics (2012) 1.02
Transcriptome profiling of bovine milk oligosaccharide metabolism genes using RNA-sequencing. PLoS One (2011) 1.01
Conserved role of unc-79 in ethanol responses in lightweight mutant mice. PLoS Genet (2010) 1.00
Functional mapping of quantitative trait loci that interact with the hg mutation to regulate growth trajectories in mice. Genetics (2005) 1.00
RNA-seq analysis of single bovine blastocysts. BMC Genomics (2013) 0.99
Genome-wide isolation of growth and obesity QTL using mouse speed congenic strains. BMC Genomics (2006) 0.98
Genetic dissection of a major mouse obesity QTL (Carfhg2): integration of gene expression and causality modeling. Physiol Genomics (2009) 0.96
Serious limitations of the QTL/microarray approach for QTL gene discovery. BMC Biol (2010) 0.95
Combining mouse mammary gland gene expression and comparative mapping for the identification of candidate genes for QTL of milk production traits in cattle. BMC Genomics (2007) 0.93
Gene expression databases and data mining. Biotechniques (2003) 0.93
Predicting the important enzymes in human breast milk digestion. J Agric Food Chem (2014) 0.92
Sequencing the transcriptome of milk production: milk trumps mammary tissue. BMC Genomics (2013) 0.92
Evidence of maternal QTL affecting growth and obesity in adult mice. Mamm Genome (2009) 0.91
Identification of a congenic mouse line with obesity and body length phenotypes. Mamm Genome (2004) 0.91
Predisposition to late-onset obesity in GIRK4 knockout mice. Proc Natl Acad Sci U S A (2008) 0.89
Comparison of buccal and blood-derived canine DNA, either native or whole genome amplified, for array-based genome-wide association studies. BMC Res Notes (2011) 0.87
Polymorphisms in genes in the SREBP1 signalling pathway and SCD are associated with milk fatty acid composition in Holstein cattle. J Dairy Res (2011) 0.86
Overexpression of Scg5 increases enzymatic activity of PCSK2 and is inversely correlated with body weight in congenic mice. BMC Genet (2008) 0.86
Genome scans for transmission ratio distortion regions in mice. Genetics (2012) 0.86
Dietary catechin delays tumor onset in a transgenic mouse model. Am J Clin Nutr (2002) 0.84
Molecular phylogeny and SNP variation of polar bears (Ursus maritimus), brown bears (U. arctos), and black bears (U. americanus) derived from genome sequences. J Hered (2014) 0.84
Within-generation mutation variance for litter size in inbred mice. Genetics (2008) 0.83
Development and testing of a high-density cDNA microarray resource for cattle. Physiol Genomics (2003) 0.83
Analysis of a human fungiform papillae cDNA library and identification of taste-related genes. Chem Senses (2004) 0.82
Growth response and expression of muscle growth-related candidate genes in adult zebrafish fed plant and fishmeal protein-based diets. Zebrafish (2013) 0.82
Dynamic modulation of prohormone convertase 2 (PC2)-mediated precursor processing by 7B2 protein: preferential effect on glucagon synthesis. J Biol Chem (2011) 0.81
Single nucleotide polymorphisms in CETP, SLC46A1, SLC19A1, CD36, BCMO1, APOA5, and ABCA1 are significant predictors of plasma HDL in healthy adults. Lipids Health Dis (2013) 0.80
RNA sequencing to study gene expression and SNP variations associated with growth in zebrafish fed a plant protein-based diet. Mar Biotechnol (NY) (2015) 0.80
Leptin receptor interacts with rat chromosome 1 to regulate renal disease traits. Physiol Genomics (2012) 0.79
Diet effects on female reproduction in high growth (hg/hg) mice that are deficient in the Socs-2 gene. Reprod Nutr Dev (2004) 0.78
Primer on genes encoding enzymes in sialic acid metabolism in mammals. Biochimie (2011) 0.78
Segregation analysis of a sex ratio distortion locus in congenic mice. J Hered (2009) 0.77
Lack of Socs2 expression reduces lifespan in high-growth mice. Age (Dordr) (2008) 0.75