PubRank

Sean Davis

Author PubWeight™ 206.65‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 2007 75.09
2 Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia. Science 2008 20.68
3 High-resolution mapping and characterization of open chromatin across the genome. Cell 2008 15.93
4 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res 2012 15.84
5 BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis. Bioinformatics 2005 9.84
6 Exome sequencing identifies GRIN2A as frequently mutated in melanoma. Nat Genet 2011 7.31
7 DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays. Nat Methods 2006 6.25
8 Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS). Genome Res 2005 5.71
9 A single IGF1 allele is a major determinant of small size in dogs. Science 2007 4.68
10 Interferon-γ links ultraviolet radiation to melanomagenesis in mice. Nature 2011 3.56
11 Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays. Methods Enzymol 2006 3.53
12 Gene expression profiling of human sarcomas: insights into sarcoma biology. Cancer Res 2005 2.64
13 Genome-wide analysis of menin binding provides insights into MEN1 tumorigenesis. PLoS Genet 2006 2.62
14 Analysis of the matrix metalloproteinase family reveals that MMP8 is often mutated in melanoma. Nat Genet 2009 2.58
15 Database of mRNA gene expression profiles of multiple human organs. Genome Res 2005 2.11
16 Evidence for an unanticipated relationship between undifferentiated pleomorphic sarcoma and embryonal rhabdomyosarcoma. Cancer Cell 2011 1.96
17 RCircos: an R package for Circos 2D track plots. BMC Bioinformatics 2013 1.95
18 A molecular function map of Ewing's sarcoma. PLoS One 2009 1.69
19 GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus. Bioinformatics 2008 1.68
20 Large-scale profiling of archival lymph nodes reveals pervasive remodeling of the follicular lymphoma methylome. Cancer Res 2009 1.58
21 Canine tumor cross-species genomics uncovers targets linked to osteosarcoma progression. BMC Genomics 2009 1.57
22 Identification of an inhibitor of the EWS-FLI1 oncogenic transcription factor by high-throughput screening. J Natl Cancer Inst 2011 1.55
23 Vorinostat inhibits brain metastatic colonization in a model of triple-negative breast cancer and induces DNA double-strand breaks. Clin Cancer Res 2009 1.40
24 Analyses of resected human brain metastases of breast cancer reveal the association between up-regulation of hexokinase 2 and poor prognosis. Mol Cancer Res 2009 1.36
25 Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma. Proc Natl Acad Sci U S A 2013 1.35
26 Suppressor role of activating transcription factor 2 (ATF2) in skin cancer. Proc Natl Acad Sci U S A 2008 1.26
27 Assessment of automated image analysis of breast cancer tissue microarrays for epidemiologic studies. Cancer Epidemiol Biomarkers Prev 2010 1.25
28 Oncogenic ETS fusions deregulate E2F3 target genes in Ewing sarcoma and prostate cancer. Genome Res 2013 1.11
29 Molecular grading of ductal carcinoma in situ of the breast. Clin Cancer Res 2008 1.09
30 Chromothripsis and focal copy number alterations determine poor outcome in malignant melanoma. Cancer Res 2012 1.05
31 Preferential localization of human origins of DNA replication at the 5'-ends of expressed genes and at evolutionarily conserved DNA sequences. PLoS One 2011 1.04
32 Chemical analysis of four capsules containing the controlled substance analogues 4-methylmethcathinone, 2-fluoromethamphetamine, alpha-phthalimidopropiophenone and N-ethylcathinone. Forensic Sci Int 2010 0.99
33 Constitutive Fms-like tyrosine kinase 3 activation results in specific changes in gene expression in myeloid leukaemic cells. Br J Haematol 2007 0.99
34 Zoom-in comparative genomic hybridisation arrays for the characterisation of variable breakpoint contiguous gene syndromes. J Med Genet 2006 0.95
35 Genome-wide methylation patterns in papillary thyroid cancer are distinct based on histological subtype and tumor genotype. J Clin Endocrinol Metab 2013 0.90
36 Comparative exome sequencing of metastatic lesions provides insights into the mutational progression of melanoma. BMC Genomics 2012 0.88
37 Archival fine-needle aspiration cytopathology (FNAC) samples: untapped resource for clinical molecular profiling. J Mol Diagn 2010 0.87
38 A methyl-deviator epigenotype of estrogen receptor-positive breast carcinoma is associated with malignant biology. Am J Pathol 2011 0.87
39 In vivo role of alternative splicing and serine phosphorylation of the microphthalmia-associated transcription factor. Genetics 2012 0.83
40 Advanced bone formation in mice with a dominant-negative mutation in the thyroid hormone receptor β gene due to activation of Wnt/β-catenin protein signaling. J Biol Chem 2012 0.82
41 Whole genome and transcriptome sequencing of a B3 thymoma. PLoS One 2013 0.81
42 Photodestructible vesicles. Langmuir 2006 0.81
43 Public data and open source tools for multi-assay genomic investigation of disease. Brief Bioinform 2015 0.80
44 Detection of novel amplicons in prostate cancer by comprehensive genomic profiling of prostate cancer cell lines using oligonucleotide-based arrayCGH. PLoS One 2007 0.79
45 Genome-wide methylation profiling in archival formalin-fixed paraffin-embedded tissue samples. Methods Mol Biol 2012 0.77
46 Exclusion of the 750-kb genetically unstable region at Xq27 as a candidate locus for prostate malignancy in HPCX1-linked families. Genes Chromosomes Cancer 2012 0.76
47 Prohibitin expression is associated with high grade breast cancer but is not a driver of amplification at 17q21.33. Pathology 2013 0.75
48 The therapeutic pyramid: a common factors synthesis of techniques, alliance, and way of being. J Marital Fam Ther 2013 0.75
49 Precipitation of inorganic salts inside hollow micrometer-sized polyelectrolyte shells. J Colloid Interface Sci 2002 0.75