Published in Plasmid on May 12, 2012
Molecular characterization of bla ESBL-harboring conjugative plasmids identified in multi-drug resistant Escherichia coli isolated from food-producing animals and healthy humans. Front Microbiol (2013) 0.99
Using protein clusters from whole proteomes to construct and augment a dendrogram. Adv Bioinformatics (2013) 0.79
Local transmission and global dissemination of New Delhi Metallo-Beta-Lactamase (NDM): a whole genome analysis. BMC Genomics (2016) 0.78
blaCMY-2-positive IncA/C plasmids from Escherichia coli and Salmonella enterica are a distinct component of a larger lineage of plasmids. Antimicrob Agents Chemother (2009) 2.51
Developmental control of titin isoform expression and passive stiffness in fetal and neonatal myocardium. Circ Res (2004) 2.38
Evaluation of pulsed-field gel electrophoresis as a tool for determining the degree of genetic relatedness between strains of Escherichia coli O157:H7. J Clin Microbiol (2003) 2.27
Variation in biofilm formation among strains of Listeria monocytogenes. Appl Environ Microbiol (2003) 2.26
Role of calf-adapted Escherichia coli in maintenance of antimicrobial drug resistance in dairy calves. Appl Environ Microbiol (2004) 1.90
Variability in the region downstream of the blaCMY-2 beta-lactamase gene in Escherichia coli and Salmonella enterica plasmids. Antimicrob Agents Chemother (2006) 1.65
Discovery of a gene conferring multiple-aminoglycoside resistance in Escherichia coli. Antimicrob Agents Chemother (2010) 1.55
Listeria monocytogenes serotype identification by PCR. J Clin Microbiol (2003) 1.54
Discrimination among Listeria monocytogenes isolates using a mixed genome DNA microarray. Vet Microbiol (2003) 1.44
Type III secretion system 1 genes in Vibrio parahaemolyticus are positively regulated by ExsA and negatively regulated by ExsD. Mol Microbiol (2008) 1.34
Selective discrimination of Listeria monocytogenes epidemic strains by a mixed-genome DNA microarray compared to discrimination by pulsed-field gel electrophoresis, ribotyping, and multilocus sequence typing. J Clin Microbiol (2004) 1.32
Prevalence and antimicrobial resistance of thermophilic Campylobacter spp. from cattle farms in Washington State. Appl Environ Microbiol (2005) 1.32
Selection pressure required for long-term persistence of blaCMY-2-positive IncA/C plasmids. Appl Environ Microbiol (2011) 1.29
Detection of pathogenic Vibrio spp. in shellfish by using multiplex PCR and DNA microarrays. Appl Environ Microbiol (2004) 1.28
Production of organic acids by probiotic lactobacilli can be used to reduce pathogen load in poultry. PLoS One (2012) 1.26
Bibersteinia trehalosi inhibits the growth of Mannheimia haemolytica by a proximity-dependent mechanism. Appl Environ Microbiol (2009) 1.24
Role of ceftiofur in selection and dissemination of blaCMY-2-mediated cephalosporin resistance in Salmonella enterica and commensal Escherichia coli isolates from cattle. Appl Environ Microbiol (2009) 1.23
Simultaneous discrimination between 15 fish pathogens by using 16S ribosomal DNA PCR and DNA microarrays. Appl Environ Microbiol (2004) 1.21
Simultaneous detection of marine fish pathogens by using multiplex PCR and a DNA microarray. J Clin Microbiol (2004) 1.19
Molecular epidemiology of blaCMY-2 plasmids carried by Salmonella enterica and Escherichia coli isolates from cattle in the Pacific Northwest. Appl Environ Microbiol (2007) 1.19
Amplicon secondary structure prevents target hybridization to oligonucleotide microarrays. Biosens Bioelectron (2004) 1.19
PCR detection of specific pathogens in water: a risk-based analysis. Environ Sci Technol (2002) 1.10
Use of a nonmedicated dietary supplement correlates with increased prevalence of streptomycin-sulfa-tetracycline-resistant Escherichia coli on a dairy farm. Appl Environ Microbiol (2006) 1.10
Antimicrobial drug resistance genes do not convey a secondary fitness advantage to calf-adapted Escherichia coli. Appl Environ Microbiol (2006) 1.05
Development of two animal models to study the function of Vibrio parahaemolyticus type III secretion systems. Infect Immun (2010) 1.04
Type III secretion system 1 of Vibrio parahaemolyticus induces oncosis in both epithelial and monocytic cell lines. Microbiology (2009) 1.04
Feedstuffs as a vehicle of cattle exposure to Escherichia coli O157:H7 and Salmonella enterica. Vet Microbiol (2003) 1.02
Multilocus variable-number tandem-repeat method for typing Salmonella enterica serovar Newport. J Clin Microbiol (2009) 1.01
Differential virulence of clinical and bovine-biased enterohemorrhagic Escherichia coli O157:H7 genotypes in piglet and Dutch belted rabbit models. Infect Immun (2011) 1.00
Expansion of variant diversity associated with a high prevalence of pathogen strain superinfection under conditions of natural transmission. Infect Immun (2012) 1.00
Quantitative oligonucleotide microarray fingerprinting of Salmonella enterica isolates. Nucleic Acids Res (2004) 0.99
Transposon mutagenesis of Salmonella enterica serovar Enteritidis identifies genes that contribute to invasiveness in human and chicken cells and survival in egg albumen. Infect Immun (2012) 0.98
Characterization of mono- and mixed-culture Campylobacter jejuni biofilms. Appl Environ Microbiol (2011) 0.97
Fingerprinting closely related xanthomonas pathovars with random nonamer oligonucleotide microarrays. Appl Environ Microbiol (2002) 0.96
Cell invasion of poultry-associated Salmonella enterica serovar Enteritidis isolates is associated with pathogenicity, motility and proteins secreted by the type III secretion system. Microbiology (2011) 0.96
Identification of specific gene sequences conserved in contemporary epidemic strains of Salmonella enterica. Appl Environ Microbiol (2006) 0.95
Vp1659 is a Vibrio parahaemolyticus type III secretion system 1 protein that contributes to translocation of effector proteins needed to induce cytolysis, autophagy, and disruption of actin structure in HeLa cells. J Bacteriol (2010) 0.95
Combining suppression subtractive hybridization and microarrays to map the intraspecies phylogeny of Flavobacterium psychrophilum. Infect Immun (2005) 0.94
The streptomycin-sulfadiazine-tetracycline antimicrobial resistance element of calf-adapted Escherichia coli is widely distributed among isolates from Washington state cattle. Appl Environ Microbiol (2007) 0.93
Characterization of a novel microcin that kills enterohemorrhagic Escherichia coli O157:H7 and O26. Appl Environ Microbiol (2012) 0.93
Comparison of shiga-toxigenic Escherichia coli prevalences among dairy, feedlot, and cow-calf herds in Washington State. Appl Environ Microbiol (2004) 0.93
Antimicrobial resistance in Salmonella enterica serovar Dublin isolates from beef and dairy sources. Vet Microbiol (2006) 0.92
Genotypic-phenotypic discrepancies between antibiotic resistance characteristics of Escherichia coli isolates from calves in management settings with high and low antibiotic use. Appl Environ Microbiol (2011) 0.92
Proximity-dependent inhibition in Escherichia coli isolates from cattle. Appl Environ Microbiol (2011) 0.91
Identification of potential vaccine target antigens by immunoproteomic analysis of a virulent and a non-virulent strain of the fish pathogen Flavobacterium psychrophilum. Dis Aquat Organ (2007) 0.91
ApicoAP: the first computational model for identifying apicoplast-targeted proteins in multiple species of Apicomplexa. PLoS One (2012) 0.91
International comparison of clinical, bovine, and environmental Escherichia coli O157 isolates on the basis of Shiga toxin-encoding bacteriophage insertion site genotypes. Appl Environ Microbiol (2008) 0.90
Salmonella Enteritidis strains from poultry exhibit differential responses to acid stress, oxidative stress, and survival in the egg albumen. Foodborne Pathog Dis (2012) 0.90
Regulation of type III secretion system 1 gene expression in Vibrio parahaemolyticus is dependent on interactions between ExsA, ExsC, and ExsD. Virulence (2010) 0.90
Human norovirus infection of caco-2 cells grown as a three-dimensional tissue structure. J Water Health (2011) 0.90
Campylobacter jejuni invade chicken LMH cells inefficiently and stimulate differential expression of the chicken CXCLi1 and CXCLi2 cytokines. Microbiology (2008) 0.89
In vitro and in vivo pathogenicity of Salmonella enteritidis clinical strains isolated from North America. Arch Microbiol (2011) 0.89
Genetic diversity of Listeria monocytogenes strains from a high-prevalence dairy farm. Appl Environ Microbiol (2005) 0.89
Identification of Anaplasma marginale type IV secretion system effector proteins. PLoS One (2011) 0.88
Using DNA microarrays to identify library-independent markers for bacterial source tracking. Appl Environ Microbiol (2006) 0.88
Multidrug-resistant Salmonella typhimurium, Pacific Northwest, United States. Emerg Infect Dis (2007) 0.87
Isolation of rifampicin resistant Flavobacterium psychrophilum strains and their potential as live attenuated vaccine candidates. Vaccine (2008) 0.87
Strawberry disease lesions in rainbow trout from southern Idaho are associated with DNA from a Rickettsia-like organism. Dis Aquat Organ (2008) 0.87
β-lactams and florfenicol antibiotics remain bioactive in soils while ciprofloxacin, neomycin, and tetracycline are neutralized. Appl Environ Microbiol (2011) 0.86
Polymorphisms in 16S rRNA genes of Flavobacterium psychrophilum correlate with elastin hydrolysis and tetracycline resistance. Dis Aquat Organ (2005) 0.86
Interactions between the environmental pathogen Listeria monocytogenes and a free-living protozoan (Acanthamoeba castellanii). Environ Microbiol (2007) 0.86
Urine from treated cattle drives selection for cephalosporin resistant Escherichia coli in soil. PLoS One (2012) 0.85
Validation of mixed-genome microarrays as a method for genetic discrimination. Appl Environ Microbiol (2007) 0.85
Identification of potential type III secretion proteins via heterologous expression of Vibrio parahaemolyticus DNA. Appl Environ Microbiol (2012) 0.84
A discrete, stochastic model and correction method for bacterial source tracking. Environ Sci Technol (2008) 0.83
Suspension microarray with dendrimer signal amplification allows direct and high-throughput subtyping of Listeria monocytogenes from genomic DNA. J Clin Microbiol (2005) 0.83
Development and validation of a resistance and virulence gene microarray targeting Escherichia coli and Salmonella enterica. J Microbiol Methods (2010) 0.82
Electrophoretic and Western blot analyses of the lipopolysaccharide and glycocalyx of Flavobacterium psychrophilum. Fish Shellfish Immunol (2007) 0.82
Limited transcriptional response of ovine microglia to prion accumulation. Biochem Biophys Res Commun (2009) 0.81
Enhanced efficacy of an attenuated Flavobacterium psychrophilum strain cultured under iron-limited conditions. Fish Shellfish Immunol (2013) 0.81
Proximity-dependent inhibition of growth of Mannheimia haemolytica by Pasteurella multocida. Appl Environ Microbiol (2012) 0.81
Calcitonin gene-related peptide partially reverses decreased production of chemokines KC and MIP-2 following murine sepsis. Inflammation (2002) 0.80
Comparison of passively transferred antibodies in bighorn and domestic lambs reveals one factor in differential susceptibility of these species to Mannheimia haemolytica-induced pneumonia. Clin Vaccine Immunol (2011) 0.80
Contribution of Salmonella Enteritidis virulence factors to intestinal colonization and systemic dissemination in 1-day-old chickens. Poult Sci (2014) 0.80
Multilocus variable-number tandem-repeat analysis for subtyping Salmonella enterica serovar Gallinarum. Avian Pathol (2011) 0.80
Vibrio parahaemolyticus ExsE is requisite for initial adhesion and subsequent type III secretion system 1-dependent autophagy in HeLa cells. Microbiology (2012) 0.79
Evidence for recent acquisition and successful transmission of bla(CTX-M-15) in Salmonella enterica in South Korea. Antimicrob Agents Chemother (2013) 0.79
Using protein clusters from whole proteomes to construct and augment a dendrogram. Adv Bioinformatics (2013) 0.79
Long oligonucleotide microarrays in wheat: evaluation of hybridization signal amplification and an oligonucleotide-design computer script. Funct Integr Genomics (2005) 0.78
Model of angiogenesis in mice with severe combined immunodeficiency (SCID) and xenoengrafted with Epstein-Barr virus-transformed B cells. Comp Med (2004) 0.78
A quantitative enzyme-linked immunosorbent assay and filtration-based fluorescent antibody test as potential tools to screen broodstock for infection with Flavobacterium psychrophilum. J Aquat Anim Health (2009) 0.78
Development of a bead-based multiplex PCR assay for the simultaneous detection of multiple Mycoplasma species. Vet Microbiol (2011) 0.77
ApicoAMP: the first computational model for identifying apicoplast-targeted transmembrane proteins in Apicomplexa. J Microbiol Methods (2013) 0.77
Dissemination of antimicrobial resistant strains of Campylobacter coli and Campylobacter jejuni among cattle in Washington State and California. Vet Microbiol (2007) 0.77
Effects of oxygenation on ammonia oxidation potential and microbial diversity in sediment from surface-flow wetland mesocosms. Bioresour Technol (2009) 0.77
Challenges associated with heterologous expression of Flavobacterium psychrophilum proteins in Escherichia coli. Mar Biotechnol (NY) (2008) 0.77
A Java-based tool for the design of classification microarrays. BMC Bioinformatics (2008) 0.76
Multiple environmental stress tests show no common phenotypes shared among contemporary epidemic strains of Salmonella enterica. Appl Environ Microbiol (2007) 0.76
Optical reflectance assay for the detection of biofilm formation. J Biomed Opt (2005) 0.76
Investigation of the link between broodstock infection, vertical transmission, and prevalence of Flavobacterium psychrophilum in eggs and progeny of Rainbow Trout and Coho Salmon. J Aquat Anim Health (2014) 0.76
Development of a DNA microarray for detection of expressed equine classical MHC class I sequences in a defined population. Immunogenetics (2010) 0.75
Not All Antibiotic Use Practices in Food-Animal Agriculture Afford the Same Risk. J Environ Qual (2016) 0.75
Attempts at validating a recombinant Flavobacterium psychrophilum gliding motility protein N as a vaccine candidate in rainbow trout, Oncorhynchus mykiss (Walbaum) against bacterial cold-water disease. FEMS Microbiol Lett (2014) 0.75
Comparison of quantitative PCR and ELISA for detection and quantification of Flavobacterium psychrophilum in salmonid broodstock. Dis Aquat Organ (2015) 0.75
A comparison of material classification techniques for ultrasound inverse imaging. J Acoust Soc Am (2002) 0.75