PubRank

Xianghong Jasmine Zhou

Author PubWeight™ 33.89‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Functional annotation and network reconstruction through cross-platform integration of microarray data. Nat Biotechnol 2005 3.30
2 Dense chromatin activates Polycomb repressive complex 2 to regulate H3 lysine 27 methylation. Science 2012 2.50
3 Mining coherent dense subgraphs across massive biological networks for functional discovery. Bioinformatics 2005 2.28
4 Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation. PLoS One 2010 2.26
5 Bayesian approach to transforming public gene expression repositories into disease diagnosis databases. Proc Natl Acad Sci U S A 2010 1.84
6 A novel computational framework for simultaneous integration of multiple types of genomic data to identify microRNA-gene regulatory modules. Bioinformatics 2011 1.68
7 Systematic discovery of functional modules and context-specific functional annotation of human genome. Bioinformatics 2007 1.61
8 A graph-based approach to systematically reconstruct human transcriptional regulatory modules. Bioinformatics 2007 1.59
9 Discovery of multi-dimensional modules by integrative analysis of cancer genomic data. Nucleic Acids Res 2012 1.46
10 An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer. BMC Genomics 2008 1.14
11 Gene Aging Nexus: a web database and data mining platform for microarray data on aging. Nucleic Acids Res 2006 1.14
12 Integrative analysis of many weighted co-expression networks using tensor computation. PLoS Comput Biol 2011 1.12
13 Identifying multi-layer gene regulatory modules from multi-dimensional genomic data. Bioinformatics 2012 1.11
14 Automated multidimensional phenotypic profiling using large public microarray repositories. Proc Natl Acad Sci U S A 2009 1.02
15 Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data. Bioinformatics 2006 0.98
16 Integrative missing value estimation for microarray data. BMC Bioinformatics 2006 0.97
17 An integrative network approach to map the transcriptome to the phenome. J Comput Biol 2009 0.95
18 Integrative disease classification based on cross-platform microarray data. BMC Bioinformatics 2009 0.94
19 Identifying dynamic network modules with temporal and spatial constraints. Pac Symp Biocomput 2009 0.87
20 High-resolution functional annotation of human transcriptome: predicting isoform functions by a novel multiple instance-based label propagation method. Nucleic Acids Res 2013 0.85
21 An integrative modular approach to systematically predict gene-phenotype associations. BMC Bioinformatics 2010 0.85
22 Integrating many co-splicing networks to reconstruct splicing regulatory modules. BMC Syst Biol 2012 0.80
23 Algorithm to identify frequent coupled modules from two-layered network series: application to study transcription and splicing coupling. J Comput Biol 2012 0.79
24 Matrix factorization methods for integrative cancer genomics. Methods Mol Biol 2014 0.78
25 Removed: Integrative differential gene expression analysis for cross-platform microarray datasets. J Biomed Inform 2006 0.77
26 Unraveling complex temporal associations in cellular systems across multiple time-series microarray datasets. J Biomed Inform 2010 0.76
27 Zooming in on genome organization. Nat Methods 2012 0.75