Phylogeography of the Indo-West Pacific maskrays (Dasyatidae, Neotrygon): a complex example of chondrichthyan radiation in the Cenozoic.

PubWeight™: 0.84‹?›

🔗 View Article (PMC 3586632)

Published in Ecol Evol on December 20, 2012

Authors

Melody Puckridge1, Peter R Last, William T White, Nikos Andreakis

Author Affiliations

1: Institute for Marine and Antarctic Studies, University of Tasmania Private Bag 129, Hobart, TAS, 7001, Australia ; Wealth from Oceans Flagship, CSIRO Marine and Atmospheric Research Castray Esplanade, Hobart, TAS, 7000, Australia.

Articles cited by this

MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (2003) 130.85

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol (1980) 113.75

MODELTEST: testing the model of DNA substitution. Bioinformatics (1998) 101.19

BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol (2007) 74.13

Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol (1981) 67.56

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics (2009) 44.48

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol (1993) 38.03

Relaxed phylogenetics and dating with confidence. PLoS Biol (2006) 37.68

Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol (1999) 35.53

Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics (1997) 20.93

DNA barcoding Australia's fish species. Philos Trans R Soc Lond B Biol Sci (2005) 11.37

DAMBE: software package for data analysis in molecular biology and evolution. J Hered (2001) 9.96

Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic Acids Res (1997) 6.33

Statistical properties of new neutrality tests against population growth. Mol Biol Evol (2002) 5.95

Defining 'Evolutionarily Significant Units' for conservation. Trends Ecol Evol (1994) 5.46

Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum Biol (1994) 5.22

Global patterns and predictors of marine biodiversity across taxa. Nature (2010) 4.71

Perspective: gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies. Evolution (2000) 4.48

High-resolution species trees without concatenation. Proc Natl Acad Sci U S A (2007) 4.44

Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by using Monmonier's algorithm. Hum Biol (2004) 3.61

Signal, noise, and reliability in molecular phylogenetic analyses. J Hered (1992) 3.55

Hopping hotspots: global shifts in marine biodiversity. Science (2008) 2.68

Molecular and functional basis of phenotypic convergence in white lizards at White Sands. Proc Natl Acad Sci U S A (2009) 1.82

Common misconceptions in molecular ecology: echoes of the modern synthesis. Mol Ecol (2012) 1.75

Sharp genetic breaks among populations of Haptosquilla pulchella (Stomatopoda) indicate limits to larval transport: patterns, causes, and consequences. Mol Ecol (2002) 1.70

Convergence in pigmentation at multiple levels: mutations, genes and function. Philos Trans R Soc Lond B Biol Sci (2010) 1.54

Cryptic speciation in a model invertebrate chordate. Proc Natl Acad Sci U S A (2007) 1.48

Comparative phylogeography of three codistributed stomatopods: origins and timing of regional lineage diversification in the Coral Triangle. Evolution (2006) 1.37

Concordant evolutionary patterns among Indo-West Pacific butterflyfishes. Proc Biol Sci (1995) 1.26

Did tectonic activity stimulate oligo-miocene speciation in the Indo-West Pacific? Evolution (2008) 1.16

Cloning of shark RAG2 and characterization of the RAG1/RAG2 gene locus. FASEB J (2003) 1.07

Molecular phylogenies and historical biogeography of a circumtropical group of gastropods (Genus: Nerita): implications for regional diversity patterns in the marine tropics. Mol Phylogenet Evol (2008) 1.06

Phylogeny of sharks of the family Triakidae (Carcharhiniformes) and its implications for the evolution of carcharhiniform placental viviparity. Mol Phylogenet Evol (2006) 1.03

Species delineation and evolutionary history of the globally distributed spotted eagle ray (Aetobatus narinari). J Hered (2009) 0.99

Reproduction of the blue-spotted maskray Neotrygon kuhlii (Myliobatoidei: Dasyatidae) in south-east Queensland, Australia. J Fish Biol (2009) 0.98

Morphological, molecular and biogeographic evidence support two new species in the Uroptychus naso complex (Crustacea: Decapoda: Chirostylidae). Mol Phylogenet Evol (2011) 0.96

Colour vision and visual ecology of the blue-spotted maskray, Dasyatis kuhlii Müller & Henle, 1814. J Comp Physiol A Neuroethol Sens Neural Behav Physiol (2006) 0.96

Cryptic diversity in flathead fishes (Scorpaeniformes: Platycephalidae) across the Indo-West Pacific uncovered by DNA barcoding. Mol Ecol Resour (2012) 0.95

World phylogeography and male-mediated gene flow in the sandbar shark, Carcharhinus plumbeus. Mol Ecol (2010) 0.95

A recent shark radiation: molecular phylogeny, biogeography and speciation of wobbegong sharks (family: Orectolobidae). Mol Phylogenet Evol (2009) 0.92

Ancient origins of Indo-Pacific coral reef fish biodiversity: a case study of the leopard wrasses (Labridae: Macropharyngodon). Mol Phylogenet Evol (2005) 0.92

IUCN classification zones concord with, but underestimate, the population genetic structure of the zebra shark Stegostoma fasciatum in the Indo-West Pacific. Mol Ecol (2009) 0.90

Mito-nuclear discordance in the degree of population differentiation in a marine goby. Heredity (Edinb) (2010) 0.88

A genetic assessment of polyandry and breeding-site fidelity in lemon sharks. Mol Ecol (2008) 0.88

The West Pacific diversity hotspot as a source or sink for new species? Population genetic insights from the Indo-Pacific parrotfish Scarus rubroviolaceus. Mol Ecol (2010) 0.83

Comparative phylogeography of two seastars and their ectosymbionts within the Coral Triangle. Mol Ecol (2008) 0.83

Articles by these authors

DNA barcoding Australia's fish species. Philos Trans R Soc Lond B Biol Sci (2005) 11.37

Extinction risk and conservation of the world's sharks and rays. Elife (2014) 3.83

Cryptic speciation in a model invertebrate chordate. Proc Natl Acad Sci U S A (2007) 1.48

Multilocus sequence analysis provides basis for fast and reliable identification of Vibrio harveyi-related species and reveals previous misidentification of important marine pathogens. Syst Appl Microbiol (2011) 1.01

Differential regulation of the zebrafish orthopedia 1 gene during fate determination of diencephalic neurons. BMC Dev Biol (2006) 1.00

Redescription of Aetobatus flagellum (Bloch & Schneider, 1801), an endangered eagle ray (Myliobatoidea: Myliobatidae) from the Indo-West Pacific. Zootaxa (2013) 0.98

Morphological, molecular and biogeographic evidence support two new species in the Uroptychus naso complex (Crustacea: Decapoda: Chirostylidae). Mol Phylogenet Evol (2011) 0.96

Cryptic diversity in flathead fishes (Scorpaeniformes: Platycephalidae) across the Indo-West Pacific uncovered by DNA barcoding. Mol Ecol Resour (2012) 0.95

Pocillopora aliciae: a new species of scleractinian coral (Scleractinia, Pocilloporidae) from subtropical Eastern Australia. Zootaxa (2013) 0.91

Proteomic characterisation of toxins isolated from nematocysts of the South Atlantic jellyfish Olindias sambaquiensis. Toxicon (2013) 0.89

Using bacterial extract along with differential gene expression in Acropora millepora larvae to decouple the processes of attachment and metamorphosis. PLoS One (2012) 0.88

Gene expression signatures of energetic acclimatisation in the reef building coral Acropora millepora. PLoS One (2013) 0.81

Redescription of Paragaleus tengi (Chen, 1963) (Carcharhiniformes: Hemigaleidae) and first record of Paragaleus randalli Compagno, Krupp & Carpenter, 1996 from the western North Pacific. Zootaxa (2013) 0.80

Natural variation of model mutant phenotypes in Ciona intestinalis. PLoS One (2008) 0.79

SNPs and Hox gene mapping in Ciona intestinalis. BMC Genomics (2008) 0.78

A DNA sequence-based identification checklist for Taiwanese chondrichthyans. Zootaxa (2013) 0.77

Introduction to the systematics and biodiversity of sharks, rays, and chimaeras (Chondrichthyes) of Taiwan. Zootaxa (2013) 0.77

Revision of the genus Centrophorus (Squaliformes: Centrophoridae): Part 1--Redescription of Centrophorus granulosus (Bloch & Schneider), a senior synonym of C. acus Garman and C. niaukang Teng. Zootaxa (2013) 0.77

Notes on shark and ray types at the South China Sea Fisheries Research Institute (SCSFRI) in Guangzhou, China. Zootaxa (2013) 0.75

Dipturus amphispinus sp. nov., a new longsnout skate (Rajoidei: Rajidae) from the Philippines. Zootaxa (2013) 0.75

A new species of wedgefish, Rhynchobatus immaculatus (Chondrichthyes, Rhynchobatidae), from Taiwan. Zootaxa (2013) 0.75

A new species of velvet skate, <i>Notoraja</i> <i>sereti</i> n.sp. (Rajiformes: Arhynchobatidae) from Papua New Guinea. Zootaxa (2017) 0.75

Two new species of the coffinfish genus Chaunax (Lophiiformes: Chaunacidae) from the Indian Ocean. Zootaxa (2013) 0.75

An annotated checklist of the chondrichthyans of Taiwan. Zootaxa (2013) 0.75

Redescription of Hexanchus nakamurai Teng 1962, (Chondrichthyes: Hexanchiformes: Hexanchidae), with designation of a neotype. Zootaxa (2013) 0.75

Two new stingrays (Chondrichthyes: Dasyatidae) from the eastern Indonesian Archipelago. Zootaxa (2013) 0.75