A Framework for Linear and Non-Linear Registration of Diffusion-Weighted MRIs Using Angular Interpolation.

PubWeight™: 0.76‹?›

🔗 View Article (PMC 3625902)

Published in Front Neurosci on April 04, 2013

Authors

Julio M Duarte-Carvajalino1, Guillermo Sapiro, Noam Harel, Christophe Lenglet

Author Affiliations

1: Department of Radiology, Center for Magnetic Resonance Research, University of Minnesota Medical School Minneapolis, MN, USA.

Articles cited by this

Improved optimization for the robust and accurate linear registration and motion correction of brain images. Neuroimage (2002) 38.46

MR diffusion tensor spectroscopy and imaging. Biophys J (1994) 22.78

Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. J Magn Reson B (1996) 19.47

Characterization and propagation of uncertainty in diffusion-weighted MR imaging. Magn Reson Med (2003) 12.09

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. Neuroimage (2009) 11.90

Toward a quantitative assessment of diffusion anisotropy. Magn Reson Med (1996) 10.50

Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging. Magn Reson Med (1999) 8.94

Spatial transformations of diffusion tensor magnetic resonance images. IEEE Trans Med Imaging (2001) 6.74

Diffusion-tensor MRI: theory, experimental design and data analysis - a technical review. NMR Biomed (2002) 6.69

Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification. Neuroimage (2007) 5.23

Deformable registration of diffusion tensor MR images with explicit orientation optimization. Med Image Anal (2006) 3.68

Artifacts and pitfalls in diffusion MRI. J Magn Reson Imaging (2006) 2.93

Comparison of gradient encoding schemes for diffusion-tensor MRI. J Magn Reson Imaging (2001) 2.42

Fast and simple calculus on tensors in the log-Euclidean framework. Med Image Comput Comput Assist Interv (2005) 2.16

DT-REFinD: diffusion tensor registration with exact finite-strain differential. IEEE Trans Med Imaging (2009) 1.59

DTI registration in atlas based fiber analysis of infantile Krabbe disease. Neuroimage (2011) 1.38

Comprehensive in vivo mapping of the human basal ganglia and thalamic connectome in individuals using 7T MRI. PLoS One (2012) 1.36

Noise considerations in the determination of diffusion tensor anisotropy. Magn Reson Imaging (2000) 1.34

Diffeomorphic metric mapping of high angular resolution diffusion imaging based on Riemannian structure of orientation distribution functions. IEEE Trans Med Imaging (2011) 1.23

Magnetic resonance field strength effects on diffusion measures and brain connectivity networks. Brain Connect (2013) 1.16

Magnetic resonance neurography and diffusion tensor imaging: origins, history, and clinical impact of the first 50,000 cases with an assessment of efficacy and utility in a prospective 5000-patient study group. Neurosurgery (2009) 1.15

Symmetric diffeomorphic registration of fibre orientation distributions. Neuroimage (2011) 1.07

Probabilistic Identification and Estimation of Noise (PIESNO): a self-consistent approach and its applications in MRI. J Magn Reson (2009) 1.03

Registration of high angular resolution diffusion MRI images using 4th order tensors. Med Image Comput Comput Assist Interv (2007) 1.03

Retrospective evaluation of a topology preserving non-rigid registration method. Med Image Anal (2006) 0.96

Automatic deformable diffusion tensor registration for fiber population analysis. Med Image Comput Comput Assist Interv (2008) 0.93

Effects of interpolation methods in spatial normalization of diffusion tensor imaging data on group comparison of fractional anisotropy. Magn Reson Imaging (2008) 0.93

A method for registering diffusion weighted magnetic resonance images. Med Image Comput Comput Assist Interv (2006) 0.89

Visualizing white matter pathways in the living human brain: diffusion tensor imaging and beyond. Neuroimaging Clin N Am (2007) 0.86

Diffeomorphic image registration of diffusion MRI using spherical harmonics. IEEE Trans Med Imaging (2010) 0.84

Non-rigid Registration of High Angular Resolution Diffusion Images Represented by Gaussian Mixture Fields. Med Image Comput Comput Assist Interv (2009) 0.81

Assessment of averaging spatially correlated noise for 3-D radial imaging. IEEE Trans Med Imaging (2011) 0.77

Articles by these authors

Molecular architecture of native HIV-1 gp120 trimers. Nature (2008) 8.04

Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI. Magn Reson Med (2010) 5.42

Reconstruction of the orientation distribution function in single- and multiple-shell q-ball imaging within constant solid angle. Magn Reson Med (2010) 3.24

Structural mechanism of trimeric HIV-1 envelope glycoprotein activation. PLoS Pathog (2012) 3.07

High-field fMRI unveils orientation columns in humans. Proc Natl Acad Sci U S A (2008) 2.94

Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. Neuroimage (2013) 2.68

Blood capillary distribution correlates with hemodynamic-based functional imaging in cerebral cortex. Cereb Cortex (2002) 2.54

Advances in diffusion MRI acquisition and processing in the Human Connectome Project. Neuroimage (2013) 2.46

Sparse representation for color image restoration. IEEE Trans Image Process (2008) 2.17

A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography. Med Image Anal (2011) 1.98

The development of gyrification in childhood and adolescence. Brain Cogn (2009) 1.43

Comprehensive in vivo mapping of the human basal ganglia and thalamic connectome in individuals using 7T MRI. PLoS One (2012) 1.36

Protein secondary structure determination by constrained single-particle cryo-electron tomography. Structure (2012) 1.36

An assessment of current brain targets for deep brain stimulation surgery with susceptibility-weighted imaging at 7 tesla. Neurosurgery (2010) 1.36

The spatial dependence of the poststimulus undershoot as revealed by high-resolution BOLD- and CBV-weighted fMRI. J Cereb Blood Flow Metab (2006) 1.32

Solving inverse problems with piecewise linear estimators: from Gaussian mixture models to structured sparsity. IEEE Trans Image Process (2011) 1.25

An energy-based three-dimensional segmentation approach for the quantitative interpretation of electron tomograms. IEEE Trans Image Process (2005) 1.20

A geometric method for automatic extraction of sulcal fundi. IEEE Trans Med Imaging (2007) 1.19

Layer-specific fMRI reflects different neuronal computations at different depths in human V1. PLoS One (2012) 1.18

Structure and accessibility of HA trimers on intact 2009 H1N1 pandemic influenza virus to stem region-specific neutralizing antibodies. Proc Natl Acad Sci U S A (2013) 1.17

Is image steganography natural? IEEE Trans Image Process (2005) 1.17

Magnetic resonance field strength effects on diffusion measures and brain connectivity networks. Brain Connect (2013) 1.16

Learning to sense sparse signals: simultaneous sensing matrix and sparsifying dictionary optimization. IEEE Trans Image Process (2009) 1.15

A nonparametric Riemannian framework for processing high angular resolution diffusion images and its applications to ODF-based morphometry. Neuroimage (2011) 1.14

Topological analysis of population activity in visual cortex. J Vis (2008) 1.14

Measurement of cortical thickness from MRI by minimum line integrals on soft-classified tissue. Hum Brain Mapp (2009) 1.13

Coded aperture compressive temporal imaging. Opt Express (2013) 1.13

Hierarchical topological network analysis of anatomical human brain connectivity and differences related to sex and kinship. Neuroimage (2011) 1.12

Design of multishell sampling schemes with uniform coverage in diffusion MRI. Magn Reson Med (2013) 1.12

Statistical analysis of RNA backbone. IEEE/ACM Trans Comput Biol Bioinform (2006) 1.09

Estimating orientation distribution functions with probability density constraints and spatial regularity. Med Image Comput Comput Assist Interv (2009) 1.08

Implicit brain imaging. Neuroimage (2004) 1.07

Increases in oxygen consumption without cerebral blood volume change during visual stimulation under hypotension condition. J Cereb Blood Flow Metab (2005) 1.06

In vivo micro-MRI of intracortical neurovasculature. Neuroimage (2006) 1.04

Multiple Q-shell ODF reconstruction in Q-ball imaging. Med Image Comput Comput Assist Interv (2009) 0.99

Shapes of antibody binding sites: qualitative and quantitative analyses based on a geomorphic classification scheme. J Org Chem (2006) 0.98

Computational separation of conformational heterogeneity using cryo-electron tomography and 3D sub-volume averaging. J Struct Biol (2012) 0.98

Detection of neuronal loss using T(1rho) MRI assessment of (1)H(2)O spin dynamics in the aphakia mouse. J Neurosci Methods (2008) 0.98

Simultaneous structure and texture image inpainting. IEEE Trans Image Process (2003) 0.97

Whole brain high-resolution functional imaging at ultra high magnetic fields: an application to the analysis of resting state networks. Neuroimage (2011) 0.97

A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography. J Struct Biol (2012) 0.95

Diffusion abnormalities in the primary sensorimotor pathways in writer's cramp. Arch Neurol (2009) 0.95

Variational, geometric, and statistical methods for modeling brain anatomy and function. Neuroimage (2004) 0.93

Evaluation of denoising algorithms for biological electron tomography. J Struct Biol (2008) 0.93

Statistical characterization of protein ensembles. IEEE/ACM Trans Comput Biol Bioinform (2008) 0.92

Feasibility of using ultra-high field (7 T) MRI for clinical surgical targeting. PLoS One (2012) 0.91

Decreases in ADC observed in tissue areas during activation in the cat visual cortex at 9.4 T using high diffusion sensitization. Magn Reson Imaging (2008) 0.90

A convex model for nonnegative matrix factorization and dimensionality reduction on physical space. IEEE Trans Image Process (2012) 0.89

Strain variations in single amino acids of the 86-kilodalton human cytomegalovirus major immediate-early protein (IE2) affect its functional and biochemical properties: implications of dynamic protein conformation. J Virol (2003) 0.89

Heating induced near deep brain stimulation lead electrodes during magnetic resonance imaging with a 3 T transceive volume head coil. Phys Med Biol (2012) 0.88

Fast image and video colorization using chrominance blending. IEEE Trans Image Process (2006) 0.88

Cerebral blood volume MRI with intravascular superparamagnetic iron oxide nanoparticles. NMR Biomed (2012) 0.87

Interactive image segmentation via adaptive weighted distances. IEEE Trans Image Process (2007) 0.86

Three-dimensional arm movements at constant equi-affine speed. Cortex (2008) 0.86

A comprehensive framework for image inpainting. IEEE Trans Image Process (2010) 0.85

ODF maxima extraction in spherical harmonic representation via analytical search space reduction. Med Image Comput Comput Assist Interv (2010) 0.85

Geometric computation of human gyrification indexes from magnetic resonance images. Hum Brain Mapp (2012) 0.84

Structure and texture filling-in of missing image blocks in wireless transmission and compression applications. IEEE Trans Image Process (2003) 0.84

Learning Low-Dimensional Signal Models: A Bayesian approach based on incomplete measurements. IEEE Signal Process Mag (2011) 0.84

A 3D wavelet fusion approach for the reconstruction of isotropic-resolution MR images from orthogonal anisotropic-resolution scans. Magn Reson Med (2011) 0.84

An image processing approach to computing distances between RNA secondary structures dot plots. Algorithms Mol Biol (2009) 0.83

Nonparametric Bayesian dictionary learning for analysis of noisy and incomplete images. IEEE Trans Image Process (2011) 0.82

Graph Matching: Relax at Your Own Risk. IEEE Trans Pattern Anal Mach Intell (2016) 0.81

Automatic colon polyp flagging via geometric and texture features. Conf Proc IEEE Eng Med Biol Soc (2010) 0.81

Deep learning with hierarchical convolutional factor analysis. IEEE Trans Pattern Anal Mach Intell (2013) 0.81

Semiautomatic segmentation of brain subcortical structures from high-field MRI. IEEE J Biomed Health Inform (2014) 0.80

Estimation of the CSA-ODF using Bayesian compressed sensing of multi-shell HARDI. Magn Reson Med (2013) 0.80

Video compressive sensing using Gaussian mixture models. IEEE Trans Image Process (2014) 0.80

Universal regularizers for robust sparse coding and modeling. IEEE Trans Image Process (2012) 0.80

Dissimilarity-Based Sparse Subset Selection. IEEE Trans Pattern Anal Mach Intell (2015) 0.80

Evaluation of a magnetic resonance-compatible dentoalveolar tactile stimulus device. BMC Neurosci (2010) 0.79

Motion Detection in Diffusion MRI via Online ODF Estimation. Int J Biomed Imaging (2013) 0.79

Simultaneous ODF estimation and tractography in HARDI. Conf Proc IEEE Eng Med Biol Soc (2012) 0.78

Toward multiple catheters detection in fluoroscopic image guided interventions. IEEE Trans Inf Technol Biomed (2012) 0.78

Area-Based Medial Axis of Planar Curves. Int J Comput Vis (2004) 0.75

Video inpainting under constrained camera motion. IEEE Trans Image Process (2007) 0.75

Removing Camera Shake via Weighted Fourier Burst Accumulation. IEEE Trans Image Process (2015) 0.75