Published in J Am Soc Mass Spectrom on March 01, 1993
The mechanism of pseudouridine synthase I as deduced from its interaction with 5-fluorouracil-tRNA. Proc Natl Acad Sci U S A (1999) 1.69
Identification of RNA molecules by specific enzyme digestion and mass spectrometry: software for and implementation of RNA mass mapping. Nucleic Acids Res (2009) 0.89
Mutation detection using mass spectrometric separation of tiny oligonucleotide fragments. Genome Res (2002) 0.88
Matrix-assisted laser desorption/ionization mass spectrometry screening for pseudouridine in mixtures of small RNAs by chemical derivatization, RNase digestion and signature products. Rapid Commun Mass Spectrom (2008) 0.82
RoboOligo: software for mass spectrometry data to support manual and de novo sequencing of post-transcriptionally modified ribonucleic acids. Nucleic Acids Res (2015) 0.82
Detection of RNA nucleoside modifications with the uridine-specific ribonuclease MC1 from Momordica charantia. RNA (2015) 0.79
Sequence mapping of transfer RNA chemical modifications by liquid chromatography tandem mass spectrometry. Methods (2016) 0.76
Summary: the modified nucleosides of RNA. Nucleic Acids Res (1994) 9.76
The RNA Modification Database: 1999 update. Nucleic Acids Res (1999) 4.97
The RNA modification database. Nucleic Acids Res (1997) 3.80
Structure of the modified nucleoside Q isolated from Escherichia coli transfer ribonucleic acid. 7-(4,5-cis-Dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanosine. Biochemistry (1975) 3.73
Analysis of RNA hydrolyzates by liquid chromatography-mass spectrometry. Methods Enzymol (1990) 2.56
The mechanism of adenosine to inosine conversion by the double-stranded RNA unwinding/modifying activity: a high-performance liquid chromatography-mass spectrometry analysis. Biochemistry (1991) 2.08
Structural characterization of U*-1915 in domain IV from Escherichia coli 23S ribosomal RNA as 3-methylpseudouridine. Nucleic Acids Res (1996) 2.07
Dietary selenium affects methylation of the wobble nucleoside in the anticodon of selenocysteine tRNA([Ser]Sec). J Biol Chem (1993) 2.05
beta-D-glucosyl-hydroxymethyluracil: a novel modified base present in the DNA of the parasitic protozoan T. brucei. Cell (1993) 2.00
3-(3-Amino-3-carboxypropyl)uridine: a novel modified nucleoside isolated from Escherichia coli phenylalanine transfer ribonucleic acid. Biochemistry (1974) 1.96
The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles. Biochemistry (1994) 1.86
A novel method for the determination of post-transcriptional modification in RNA by mass spectrometry. Nucleic Acids Res (1993) 1.85
Mass spectrometry of mRNA cap 4 from trypanosomatids reveals two novel nucleosides. J Biol Chem (1992) 1.85
Posttranscriptional modification of the central loop of domain V in Escherichia coli 23 S ribosomal RNA. J Biol Chem (1995) 1.84
Mass spectrometry of nucleic acid components. N,O-Permethyl derivatives of nucleosides. J Am Chem Soc (1973) 1.60
Posttranscriptional modifications in 16S and 23S rRNAs of the archaeal hyperthermophile Sulfolobus solfataricus. J Bacteriol (1998) 1.59
Mass spectrometry of nucleic acid components. Trimethylsilyl derivatives of nucleotides, nucleosides, and bases. J Am Chem Soc (1968) 1.58
Posttranscriptional modification of tRNA in thermophilic archaea (Archaebacteria). J Bacteriol (1991) 1.57
Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches. EMBO J (1998) 1.56
Structure of a modified nucleoside in archaebacterial tRNA which replaces ribosylthymine. 1-Methylpseudouridine. J Biol Chem (1982) 1.51
Complement factor H is a serum-binding protein for adrenomedullin, and the resulting complex modulates the bioactivities of both partners. J Biol Chem (2000) 1.50
TIP39: a new neuropeptide and PTH2-receptor agonist from hypothalamus. Nat Neurosci (1999) 1.49
Formation of an adenine-thymine photoadduct in the deoxydinucleoside monophosphate d(TpA) and in DNA. Science (1983) 1.47
The single pseudouridine residue in Escherichia coli 16S RNA is located at position 516. Nucleic Acids Res (1994) 1.42
Conformational flexibility in RNA: the role of dihydrouridine. Nucleic Acids Res (1996) 1.41
Letter: The structure of Q* nucleoside isolated from rabbit liver transfer ribonucleic acid. J Am Chem Soc (1976) 1.38
Transfer RNA(5-methylaminomethyl-2-thiouridine)-methyltransferase from Escherichia coli K-12 has two enzymatic activities. J Biol Chem (1987) 1.37
Identities and phylogenetic comparisons of posttranscriptional modifications in 16 S ribosomal RNA from Haloferax volcanii. J Biol Chem (2000) 1.35
Reduced misreading of asparagine codons by Escherichia coli tRNALys with hypomodified derivatives of 5-methylaminomethyl-2-thiouridine in the wobble position. J Mol Biol (1998) 1.35
Structure determination of a nucleoside Q precursor isolated from E. coli tRNA: 7-(aminomethyl)-7-deazaguanosine. Nucleic Acids Res (1978) 1.32
Differential DNA methylation during the vegetative life cycle of Neurospora crassa. J Bacteriol (1987) 1.31
Interpretation of oligonucleotide mass spectra for determination of sequence using electrospray ionization and tandem mass spectrometry. Anal Chem (1996) 1.30
Purification and characterization of the unusual deoxynucleoside, alpha-N-(9-beta-D-2'-deoxyribofuranosylpurin-6-yl)glycinamide, specified by the phage Mu modification function. Proc Natl Acad Sci U S A (1983) 1.29
Photoaffinity labeling of diphtheria toxin fragment A with NAD: structure of the photoproduct at position 148. Proc Natl Acad Sci U S A (1985) 1.25
Posttranscriptional modification of tRNA in psychrophilic bacteria. J Bacteriol (1997) 1.25
A novel modified nucleoside found at the first position of the anticodon of methionine tRNA from bovine liver mitochondria. Biochemistry (1994) 1.25
Mass spectrometry of nucleic acid components. Analogs of adenosine. J Am Chem Soc (1970) 1.24
Implications of a functional large ribosomal RNA with only three modified nucleotides. Biochimie (1995) 1.21
Chemical ionization mass spectrometry of nucleosides. Mechanisms of ion formation and estimations of proton affinity. J Am Chem Soc (1975) 1.18
The photochemistry of d(T-A) in aqueous solution and in ice. Nucleic Acids Res (1984) 1.16
Analysis of modified bases in DNA by stable isotope dilution gas chromatography-mass spectrometry: 5-methylcytosine. Anal Biochem (1983) 1.15
5S rRNA modification in the hyperthermophilic archaea Sulfolobus solfataricus and Pyrodictium occultum. FASEB J (1993) 1.13
Biosynthesis of archaeosine, a novel derivative of 7-deazaguanosine specific to archaeal tRNA, proceeds via a pathway involving base replacement on the tRNA polynucleotide chain. J Biol Chem (1997) 1.12
Structure of the archaeal transfer RNA nucleoside G*-15 (2-amino-4,7-dihydro- 4-oxo-7-beta-D-ribofuranosyl-1H-pyrrolo[2,3-d]pyrimidine-5-carboximi dam ide (archaeosine)). J Biol Chem (1993) 1.11
Characterization of oligonucleotides and nucleic acids by mass spectrometry. Curr Opin Biotechnol (1995) 1.11
Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: a unique wobble rule in animal mitochondria. Nucleic Acids Res (1999) 1.10
A novel wobble rule found in starfish mitochondria. Presence of 7-methylguanosine at the anticodon wobble position expands decoding capability of tRNA. J Biol Chem (1998) 1.09
Thermospray liquid chromatography-mass spectrometry of nucleosides and of enzymatic hydrolysates of nucleic acids. Nucleic Acids Res (1985) 1.09
Queuine, a modified base incorporated posttranscriptionally into eukaryotic transfer RNA: wide distribution in nature. Science (1982) 1.07
Applications of mass spectrometry to the characterization of oligonucleotides and nucleic acids. Curr Opin Biotechnol (1998) 1.06
Different levels of DNA methylation in yeast and mycelial forms of Candida albicans. J Bacteriol (1987) 1.05
Occurrence and levels of cis-and trans-zeatin ribosides in the culture medium of a virulent strain of Agrobacterium tumefaciens. FEBS Lett (1980) 1.05
The isolation and characterisation of a new type of dimeric adenine photoproduct in UV-irradiated deoxyadenylates. Nucleic Acids Res (1987) 1.04
Ascamycin and dealanylascamycin, nucleoside antibiotics from Streptomyces sp. J Antibiot (Tokyo) (1984) 1.04
cis 2-Methylthio-ribosylzeatin (ms2io6A) is present in the transfer RNA of Salmonella typhimurium, but not Escherichia coli. Nucleic Acids Res (1982) 1.04
Primary structure of Escherichia coli tRNA UUR Leu. Presence of an unknown adenosine derivative in the first position of the anticodon which recognizes the UU codon series. J Biol Chem (1980) 1.03
Reconstitution of the biosynthetic pathway of selenocysteine tRNAs in Xenopus oocytes. Biochemistry (1994) 1.03
N-((9- -D-ribofuranosylpurin-6-yl)-N-methylcarbamoyl) threonine, a modified nucleoside isolated from Escherichia coli threonine transfer ribonucleic acid. Biochemistry (1972) 1.01
Isolation and structure elucidation of an epoxide derivative of the hypermodified nucleoside queuosine from Escherichia coli transfer RNA. J Biol Chem (1987) 1.01
Structure determination of a new fluorescent tricyclic nucleoside from archaebacterial tRNA. Nucleic Acids Res (1987) 1.01
Mass spectrometry of nucleic acid components. Trimethylsilyl derivatives of nucleotides. J Am Chem Soc (1971) 1.01
Chorismic acid, a key metabolite in modification of tRNA. J Bacteriol (1990) 0.98
Structure determination of two new amino acid-containing derivatives of adenosine from tRNA of thermophilic bacteria and archaea. Nucleic Acids Res (1992) 0.98
An endogenous dinucleotide bound to diphtheria toxin. Adenylyl-(3',5')-uridine 3'-monophosphate. J Biol Chem (1981) 0.97
Determination of active hydrogen content by fast atom bombardment mass spectrometry following hydrogen-deuterium exchange. Biochem Biophys Res Commun (1983) 0.96
Studies on the mechanism of the enzymatic conversion of delta 8-cholesten-3 beta-ol to delta 7-cholesten-3 beta-ol. J Biol Chem (1969) 0.95
Liposidomycins: novel nucleoside antibiotics which inhibit bacterial peptidoglycan synthesis. J Antibiot (Tokyo) (1985) 0.95
Relation between functions and conformational characteristics of modified nucleosides found in tRNAs. Nucleic Acids Symp Ser (1991) 0.95
Editing does not exist for mammalian selenocysteine tRNAs. Nucleic Acids Res (1993) 0.93
Lysine tRNAs from Bacillus subtilis 168: structural analysis. Nucleic Acids Res (1982) 0.93
Introduction of deuterium by exchange for measurement by mass spectrometry. Methods Enzymol (1990) 0.93
An anticodon sequence mutant of Escherichia coli initiator tRNA: possible importance of a newly acquired base modification next to the anticodon on its activity in initiation. J Bacteriol (1995) 0.91
Determination of cytokinins by mass spectrometry based on stable isotope dilution. Anal Biochem (1979) 0.91
Evidence that the nucleic acid base queuine is incorporated intact into tRNA by animal cells. Biochemistry (1984) 0.90
Isolation and identification of cross-linked nucleosides from nitrous acid treated deoxyribonucleic acid. J Am Chem Soc (1977) 0.90
5-[[(carboxymethyl)amino]methyl]uridine is found in the anticodon of yeast mitochondrial tRNAs recognizing two-codon families ending in a purine. Biochemistry (1990) 0.90
Quantitative measurement of dihydrouridine in RNA using isotope dilution liquid chromatography-mass spectrometry (LC/MS). Nucleic Acids Res (1996) 0.90
Ultraviolet mutagenesis and its repair in an Escherichia coli strain containing a nonsense codon. Genetics (1974) 0.90
The RNA modification database. Nucleic Acids Res (1996) 0.90
Mass spectrometry of 7-methylpurine nucleosides: studies of a characteristic oxygen incorporation reaction that occurs during trimethylsilylation. Anal Biochem (1972) 0.90
An atypical form of alphaB-crystallin is present in high concentration in some human cataractous lenses. Identification and characterization of aberrant N- and C-terminal processing. J Biol Chem (1999) 0.88
Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNA(imet). Biochimie (1996) 0.88
Biosynthesis of nitro compounds. II. Studies on potential precursors for the nitro group of beta-nitropropionic acid. Biochemistry (1967) 0.87
Further evidence on the structure of cordycepin. Biochim Biophys Acta (1966) 0.87
Isotopic labeling studies of the base-catalyzed conversion of 1-methyladenosine to N 6 -methyladenosine. J Org Chem (1973) 0.87
Structure of an amniotic fluid component, 7-(4,5-cis-dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanine (queuine), a substrate for tRNA: guanine transglycosylase. J Biol Chem (1980) 0.87
Electron ionization mass spectra of trimethylsilyl derivatives of nucleosides. Methods Enzymol (1990) 0.86
Oxygen-18 exchange reactions in steroidal ketones. Determination of relative rates of incorporation by gas chromatography-mass spectrometry. Steroids (1969) 0.86
Collision-induced dissociation of uracil and its derivatives. J Am Soc Mass Spectrom (1994) 0.86
Characterization of C + located in the first position of the anticodon of Escherichia coli tRNA Met as N 4 -acetylcytidine. Biochim Biophys Acta (1972) 0.86
Adenine photodimerization in deoxyadenylate sequences: elucidation of the mechanism through structural studies of a major d(ApA) photoproduct. Nucleic Acids Res (1991) 0.86
Mass spectra of trimethylsilyl derivatives of pyrimidine and purine bases. J Org Chem (1972) 0.85
Chemical ionization mass spectrometry of nucleosides. Biochim Biophys Acta (1971) 0.85
Molecular mass measurement of intact ribonucleic acids via electrospray ionization quadrupole mass spectrometry. J Am Soc Mass Spectrom (1995) 0.84
Selective detection of ribose-methylated nucleotides in RNA by a mass spectrometry-based method. Nucleic Acids Res (1999) 0.84
Fast atom bombardment combined with tandem mass spectrometry for the determination of nucleosides. Anal Biochem (1984) 0.84