Molecular mechanisms of paralogous compensation and the robustness of cellular networks.

PubWeight™: 0.88‹?›

🔗 View Article (PMID 24376223)

Published in J Exp Zool B Mol Dev Evol on December 24, 2013

Authors

Guillaume Diss1, Diana Ascencio, Alexander DeLuna, Christian R Landry

Author Affiliations

1: Département de Biologie, Institut de Biologie Intégrative et des Systèmes, PROTEO, Pavillon Charles-Eugène-Marchand, Québec, QC, Canada.

Articles by these authors

A genome-wide view of the spectrum of spontaneous mutations in yeast. Proc Natl Acad Sci U S A (2008) 5.90

An in vivo map of the yeast protein interactome. Science (2008) 5.52

Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome. PLoS Biol (2008) 2.73

Cascading transcriptional effects of a naturally occurring frameshift mutation in Saccharomyces cerevisiae. Mol Ecol (2008) 1.69

Alternative life histories shape brain gene expression profiles in males of the same population. Proc Biol Sci (2005) 1.61

Are long-lived trees poised for evolutionary change? Single locus effects in the evolution of gene expression networks in spruce. Mol Ecol (2013) 1.45

Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing. Mol Ecol (2010) 1.30

Indel arrays: an affordable alternative for genotyping. Plant J (2007) 1.24

How perfect can protein interactomes be? Sci Signal (2009) 1.17

Moving from transcriptional to phospho-evolution: generalizing regulatory evolution? Trends Genet (2010) 1.08

Molecular characterization of the evolution of phagosomes. Mol Syst Biol (2010) 1.08

Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains. BMC Genomics (2005) 1.03

Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America. FEMS Yeast Res (2013) 1.02

GDH1 expression is regulated by GLN3, GCN4, and HAP4 under respiratory growth. Biochem Biophys Res Commun (2002) 0.99

Chromosomal variation segregates within incipient species and correlates with reproductive isolation. Mol Ecol (2014) 0.98

Specialization of the paralogue LYS21 determines lysine biosynthesis under respiratory metabolism in Saccharomyces cerevisiae. Microbiology (2008) 0.97

Characterization of spindle checkpoint kinase Mps1 reveals domain with functional and structural similarities to tetratricopeptide repeat motifs of Bub1 and BubR1 checkpoint kinases. J Biol Chem (2011) 0.97

Cell signaling. Signaling through cooperation. Science (2010) 0.95

Phosphorylation network rewiring by gene duplication. Mol Syst Biol (2011) 0.95

Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information. Philos Trans R Soc Lond B Biol Sci (2012) 0.92

Local climatic adaptation in a widespread microorganism. Proc Biol Sci (2014) 0.92

Evidence for the robustness of protein complexes to inter-species hybridization. PLoS Genet (2012) 0.90

Swi/SNF-GCN5-dependent chromatin remodelling determines induced expression of GDH3, one of the paralogous genes responsible for ammonium assimilation and glutamate biosynthesis in Saccharomyces cerevisiae. Mol Microbiol (2005) 0.89

A systematic approach for the genetic dissection of protein complexes in living cells. Cell Rep (2013) 0.89

Ecological annotation of genes and genomes through ecological genomics. Mol Ecol (2007) 0.85

What is needed for next-generation ecological and evolutionary genomics? Trends Ecol Evol (2012) 0.85

Transcriptional divergence plays a role in the rewiring of protein interaction networks after gene duplication. J Proteomics (2012) 0.83

Gcn4 negatively regulates expression of genes subjected to nitrogen catabolite repression. Biochem Biophys Res Commun (2003) 0.82

Lachancea quebecensis sp. nov., a yeast species consistently isolated from tree bark in the Canadian province of Québec. Int J Syst Evol Microbiol (2015) 0.80

qPCA: a scalable assay to measure the perturbation of protein-protein interactions in living cells. Mol Biosyst (2012) 0.80

The yeast galactose network as a quantitative model for cellular memory. Mol Biosyst (2014) 0.80

Integrative avenues for exploring the dynamics and evolution of protein interaction networks. Curr Opin Biotechnol (2013) 0.80

NADP-glutamate dehydrogenase activity is increased under hyperosmotic conditions in the halotolerant yeast Debaryomyces hansenii. Curr Microbiol (2004) 0.79

Proteomic characterization of phagosomal membrane microdomains during phagolysosome biogenesis and evolution. Mol Cell Proteomics (2012) 0.78

Where do phosphosites come from and where do they go after gene duplication? Int J Evol Biol (2012) 0.75

Feedback regulation between autophagy and PKA. Autophagy (2015) 0.75

Multi-scale perturbations of protein interactomes reveal their mechanisms of regulation, robustness and insights into genotype-phenotype maps. Brief Funct Genomics (2015) 0.75