Published in Database (Oxford) on January 09, 2014
Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria. Clin Microbiol Rev (2016) 0.84
TuberQ: a Mycobacterium tuberculosis protein druggability database. Database (Oxford) (2014) 0.79
A non-canonical mismatch repair pathway in prokaryotes. Nat Commun (2017) 0.75
Databases for Microbiologists. J Bacteriol (2015) 0.75
Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res (2008) 157.44
dbSNP: the NCBI database of genetic variation. Nucleic Acids Res (2001) 76.97
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res (2010) 43.51
Predicting deleterious amino acid substitutions. Genome Res (2001) 28.95
Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection. Nat Genet (2011) 4.19
Tuberculosis drug resistance mutation database. PLoS Med (2009) 4.13
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nat Genet (2013) 3.89
TB database: an integrated platform for tuberculosis research. Nucleic Acids Res (2008) 2.71
Variation among genome sequences of H37Rv strains of Mycobacterium tuberculosis from multiple laboratories. J Bacteriol (2010) 2.36
Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints. PLoS One (2009) 2.20
Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing. PLoS Pathog (2009) 1.33
Single nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated database. Tuberculosis (Edinb) (2012) 1.18
Mycobacterium tuberculosis--heterogeneity revealed through whole genome sequencing. Tuberculosis (Edinb) (2012) 1.17
MGDD: Mycobacterium tuberculosis genome divergence database. BMC Genomics (2008) 1.07
Draft Genome Sequence of a Clinical Isolate of Multidrug-Resistant Mycobacterium tuberculosis East African Indian Strain OSDD271. Genome Announc (2013) 0.93
TBrowse: an integrative genomics map of Mycobacterium tuberculosis. Tuberculosis (Edinb) (2009) 0.90
MTCID: a database of genetic polymorphisms in clinical isolates of Mycobacterium tuberculosis. Tuberculosis (Edinb) (2011) 0.84
Relics of selection in the mycobacterial genome. Nat Genet (2010) 0.79
Mapping human genetic diversity in Asia. Science (2009) 7.40
In vivo protein trapping produces a functional expression codex of the vertebrate proteome. Nat Methods (2011) 2.85
Targets for human encoded microRNAs in HIV genes. Biochem Biophys Res Commun (2005) 1.99
Human cellular microRNA hsa-miR-29a interferes with viral nef protein expression and HIV-1 replication. Retrovirology (2008) 1.87
Systematic transcriptome wide analysis of lncRNA-miRNA interactions. PLoS One (2013) 1.68
Upregulation of miR-23a-27a-24-2 cluster induces caspase-dependent and -independent apoptosis in human embryonic kidney cells. PLoS One (2009) 1.54
Genome-wide association study for type 2 diabetes in Indians identifies a new susceptibility locus at 2q21. Diabetes (2012) 1.40
Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif. RNA (2008) 1.34
High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region. PLoS One (2012) 1.29
Consensus miRNA expression profiles derived from interplatform normalization of microarray data. RNA (2009) 1.27
MicroRNA-mediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic {beta}-actin gene. Nucleic Acids Res (2008) 1.25
Genome-wide analysis reveals distinct patterns of epigenetic features in long non-coding RNA loci. Nucleic Acids Res (2012) 1.17
Open source drug discovery--a new paradigm of collaborative research in tuberculosis drug development. Tuberculosis (Edinb) (2011) 1.11
Predictive models for anti-tubercular molecules using machine learning on high-throughput biological screening datasets. BMC Res Notes (2011) 1.10
Crowd sourcing a new paradigm for interactome driven drug target identification in Mycobacterium tuberculosis. PLoS One (2012) 1.10
MicroRNAs: novel therapeutic targets in neurodegenerative diseases. Drug Discov Today (2009) 1.09
dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation. BMC Bioinformatics (2009) 1.07
Draft Genome Sequence of Urease-Producing Sporosarcina pasteurii with Potential Application in Biocement Production. Genome Announc (2014) 1.04
Computational models for in-vitro anti-tubercular activity of molecules based on high-throughput chemical biology screening datasets. BMC Pharmacol (2012) 1.03
microRNAs in viral oncogenesis. Retrovirology (2007) 1.03
lncRNome: a comprehensive knowledgebase of human long noncoding RNAs. Database (Oxford) (2013) 1.02
A sequence-based variation map of zebrafish. Zebrafish (2013) 0.96
Draft Genome Sequence of a Clinical Isolate of Multidrug-Resistant Mycobacterium tuberculosis East African Indian Strain OSDD271. Genome Announc (2013) 0.93
Reverse genetics screen in zebrafish identifies a role of miR-142a-3p in vascular development and integrity. PLoS One (2012) 0.91
miRvar: A comprehensive database for genomic variations in microRNAs. Hum Mutat (2011) 0.90
TBrowse: an integrative genomics map of Mycobacterium tuberculosis. Tuberculosis (Edinb) (2009) 0.90
Conceptual approaches for lncRNA drug discovery and future strategies. Expert Opin Drug Discov (2012) 0.90
Prediction of viral microRNA precursors based on human microRNA precursor sequence and structural features. Virol J (2009) 0.89
Computational analysis and predictive modeling of small molecule modulators of microRNA. J Cheminform (2012) 0.89
Proximity of H2A.Z containing nucleosome to the transcription start site influences gene expression levels in the mammalian liver and brain. Nucleic Acids Res (2012) 0.88
Predictive modeling of anti-malarial molecules inhibiting apicoplast formation. BMC Bioinformatics (2013) 0.87
Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs. Biol Direct (2012) 0.86
FishMap: a community resource for zebrafish genomics. Zebrafish (2008) 0.85
Antagomirzymes: oligonucleotide enzymes that specifically silence microRNA function. Angew Chem Int Ed Engl (2009) 0.83
Potential G-quadruplexes in the human long non-coding transcriptome. RNA Biol (2012) 0.82
Systematic analysis and functional annotation of variations in the genome of an Indian individual. Hum Mutat (2012) 0.81
Short stories on zebrafish long noncoding RNAs. Zebrafish (2014) 0.81
Draft Genome Sequence of an Extensively Drug-Resistant Mycobacterium tuberculosis Clinical Isolate of the Ural Strain OSDD493. Genome Announc (2013) 0.81
mit-o-matic: a comprehensive computational pipeline for clinical evaluation of mitochondrial variations from next-generation sequencing datasets. Hum Mutat (2015) 0.81
DyNAVacS: an integrative tool for optimized DNA vaccine design. Nucleic Acids Res (2006) 0.81
Distinct patterns of genetic variations in potential functional elements in long noncoding RNAs. Hum Mutat (2013) 0.81
De novo identification of viral pathogens from cell culture hologenomes. BMC Res Notes (2012) 0.81
Systematic pharmacogenomics analysis of a Malay whole genome: proof of concept for personalized medicine. PLoS One (2013) 0.81
Genetic epidemiology of pharmacogenetic variations in CYP2C9, CYP4F2 and VKORC1 genes associated with warfarin dosage in the Indian population. Pharmacogenomics (2014) 0.80
Systematic curation and analysis of genomic variations and their potential functional consequences in snoRNA loci. Hum Mutat (2012) 0.79
SCA-LSVD: a repeat-oriented locus-specific variation database for genotype to phenotype correlations in spinocerebellar ataxias. Hum Mutat (2009) 0.78
FishMap Zv8 update--a genomic regulatory map of zebrafish. Zebrafish (2010) 0.78
MitoLSDB: a comprehensive resource to study genotype to phenotype correlations in human mitochondrial DNA variations. PLoS One (2013) 0.78
Time for the zebrafish ENCODE. J Genet (2013) 0.77
Hsp90-targeted miRNA-liposomal formulation for systemic antitumor effect. Biomaterials (2013) 0.77
Modulation of microRNA function by synthetic ribozymes. Mol Biosyst (2010) 0.77
Pharmacogenetic landscape of clopidogrel in north Indians suggest distinct interpopulation differences in allele frequencies. Pharmacogenomics (2014) 0.77
Antagonism of microRNA function in zebrafish embryos by using locked nucleic acid enzymes (LNAzymes). Chembiochem (2012) 0.76
Cheminformatic models based on machine learning for pyruvate kinase inhibitors of Leishmania mexicana. BMC Bioinformatics (2013) 0.76
“Locked onto the target”: increasing the efficiency of antagomirzymes using locked nucleic acid modifications. Biochemistry (2010) 0.76
Draft Genome Sequence of Multidrug-Resistant Mycobacterium tuberculosis Clinical Isolate OSDD515, Belonging to the Uganda I Genotype. Genome Announc (2013) 0.76
A case for pharmacogenomics in management of cardiac arrhythmias. Indian Pacing Electrophysiol J (2012) 0.75
Draft Genome Sequence of a Multidrug-Resistant Clinical Isolate of Mycobacterium tuberculosis Belonging to a Novel Spoligotype. Genome Announc (2013) 0.75
Draft Genome Sequence of the Extremely Halophilic Bacterium Halomonas salina Strain CIFRI1, Isolated from the East Coast of India. Genome Announc (2015) 0.75
The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation. Database (Oxford) (2014) 0.75
Correction: Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding. PLoS Genet (2016) 0.75
Diagnosis of Inherited Epidermolysis Bullosa in Resource-Limited Settings: Immunohistochemistry Revisited. Dermatology (2017) 0.75
Distinct patterns of epigenetic marks and transcription factor binding sites across promoters of sense-intronic long noncoding RNAs. J Genet (2015) 0.75
Erratum for Behera et al., Draft Genome Sequence of the Extremely Halophilic Bacterium Halomonas salina Strain CIFRI1, Isolated from the East Coast of India. Genome Announc (2015) 0.75