SITDEM: a simulation tool for disease/endpoint models of association studies based on single nucleotide polymorphism genotypes.

Computational methods using genome-wide association studies to predict radiotherapy complications and to identify correlative molecular processes. Sci Rep (2017) 0.75

PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet (2007) 209.92

Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics (2004) 125.23

Genomewide association studies: history, rationale, and prospects for psychiatric disorders. Am J Psychiatry (2009) 4.74

HAPGEN2: simulation of multiple disease SNPs. Bioinformatics (2011) 2.58

Worldwide population differentiation at disease-associated SNPs. BMC Med Genomics (2008) 2.32

When to use the odds ratio or the relative risk? Int J Public Health (2008) 2.19

Odds ratio, relative risk, absolute risk reduction, and the number needed to treat--which of these should we use? Value Health (2002) 1.93

GWAsimulator: a rapid whole-genome simulation program. Bioinformatics (2007) 1.90

SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays. Bioinformatics (2006) 1.88

Overestimation of risk ratios by odds ratios in trials and cohort studies: alternatives to logistic regression. CMAJ (2011) 1.70

Generating samples for association studies based on HapMap data. BMC Bioinformatics (2008) 1.42

The generalized odds ratio as a measure of genetic risk effect in the analysis and meta-analysis of association studies. Stat Appl Genet Mol Biol (2010) 1.32

miRdSNP: a database of disease-associated SNPs and microRNA target sites on 3'UTRs of human genes. BMC Genomics (2012) 1.28

A bias-ed assessment of the use of SNPs in human complex traits. Curr Opin Genet Dev (2002) 1.24

Simulation of microarray data with realistic characteristics. BMC Bioinformatics (2006) 1.12

Genomics: The search for association. Nature (2010) 1.05

Q&A: promise and pitfalls of genome-wide association studies. BMC Biol (2010) 1.04

Genetic variation in coding regions between and within commonly used inbred rat strains. Genome Res (2004) 1.01

In silico analysis of single nucleotide polymorphism (SNPs) in human β-globin gene. PLoS One (2011) 0.93

MLR-tagging: informative SNP selection for unphased genotypes based on multiple linear regression. Bioinformatics (2006) 0.93

A unified framework for multi-locus association analysis of both common and rare variants. BMC Genomics (2011) 0.92

An easy-to-implement approach for analyzing case-control and case-only studies assuming gene-environment independence and Hardy-Weinberg equilibrium. Stat Med (2010) 0.89

Identifying disease-associated SNP clusters via contiguous outlier detection. Bioinformatics (2011) 0.80

Iterative nearest neighborhood oversampling in semisupervised learning from imbalanced data. ScientificWorldJournal (2013) 0.79