Published in Appl Environ Microbiol on March 21, 2014
A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR. J Bacteriol (1988) 31.85
A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol (1985) 11.36
Physiological and genetic responses of bacteria to osmotic stress. Microbiol Rev (1989) 10.77
The C-terminal sequence conservation between OmpA-related outer membrane proteins and MotB suggests a common function in both gram-positive and gram-negative bacteria, possibly in the interaction of these domains with peptidoglycan. Mol Microbiol (1994) 4.94
Conserved and variable functions of the sigmaE stress response in related genomes. PLoS Biol (2006) 4.46
Genetic analysis of pigment biosynthesis in Xanthobacter autotrophicus Py2 using a new, highly efficient transposon mutagenesis system that is functional in a wide variety of bacteria. Arch Microbiol (2002) 3.19
Reasons for possible failure of inoculation to enhance biodegradation. Appl Environ Microbiol (1985) 2.82
TonB-dependent transporters: regulation, structure, and function. Annu Rev Microbiol (2010) 2.72
Metabolism of dibenzo-p-dioxin by Sphingomonas sp. strain RW1. Appl Environ Microbiol (1992) 2.57
Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli. Mol Microbiol (2006) 2.33
Electrostatic couplings in OmpA ion-channel gating suggest a mechanism for pore opening. Nat Chem Biol (2006) 2.29
Action of a major outer cell envelope membrane protein in conjugation of Escherichia coli K-12. J Bacteriol (1977) 2.27
Responses of E. coli to osmotic stress: large changes in amounts of cytoplasmic solutes and water. Trends Biochem Sci (1998) 2.25
The function of OmpA in Escherichia coli. Biochem Biophys Res Commun (2002) 1.70
Toxicity of zinc to fungi, bacteria, and coliphages: influence of chloride ions. Appl Environ Microbiol (1978) 1.68
Organization and regulation of pentachlorophenol-degrading genes in Sphingobium chlorophenolicum ATCC 39723. J Bacteriol (2002) 1.65
The accumulation of glutamate is necessary for optimal growth of Salmonella typhimurium in media of high osmolality but not induction of the proU operon. J Bacteriol (1994) 1.63
Osmoregulated periplasmic glucans in Proteobacteria. FEMS Microbiol Lett (2000) 1.55
TonB-dependent receptors-structural perspectives. Biochim Biophys Acta (2002) 1.53
Isolation of adherent polycyclic aromatic hydrocarbon (PAH)-degrading bacteria using PAH-sorbing carriers. Appl Environ Microbiol (2000) 1.52
Genome-wide transcriptional responses of Escherichia coli K-12 to continuous osmotic and heat stresses. J Bacteriol (2008) 1.49
Evolution of the cellular stress proteome: from monophyletic origin to ubiquitous function. J Exp Biol (2003) 1.45
Responses of Gram-negative bacteria to certain environmental stressors. Curr Opin Microbiol (2001) 1.45
Ion transport and osmotic adjustment in Escherichia coli in response to ionic and non-ionic osmotica. Environ Microbiol (2008) 1.38
How do membrane proteins sense water stress? Mol Microbiol (2002) 1.37
Microarray analysis of the osmotic stress response in Pseudomonas aeruginosa. J Bacteriol (2006) 1.33
Use of in vivo expression technology to identify genes important in growth and survival of Pseudomonas fluorescens Pf0-1 in soil: discovery of expressed sequences with novel genetic organization. J Bacteriol (2004) 1.24
Occurrence and phylogenetic diversity of Sphingomonas strains in soils contaminated with polycyclic aromatic hydrocarbons. Appl Environ Microbiol (2004) 1.22
Comparison of 26 sphingomonad genomes reveals diverse environmental adaptations and biodegradative capabilities. Appl Environ Microbiol (2013) 1.21
Differential effects of permeating and nonpermeating solutes on the fatty acid composition of Pseudomonas putida. Appl Environ Microbiol (2000) 1.18
Compatible-solute-supported periplasmic expression of functional recombinant proteins under stress conditions. Appl Environ Microbiol (2000) 1.17
Bacterial stress responses: what doesn't kill them can make then stronger. PLoS Biol (2006) 1.16
Chaotropic solutes cause water stress in Pseudomonas putida. Environ Microbiol (2003) 1.11
Water stress effects on toluene biodegradation by Pseudomonas putida. Biodegradation (1997) 1.10
Functional genomics of stress response in Pseudomonas putida KT2440. J Bacteriol (2006) 1.09
Osmoregulated periplasmic glucan synthesis is required for Erwinia chrysanthemi pathogenicity. J Bacteriol (2001) 1.06
Cell envelope components contributing to biofilm growth and survival of Pseudomonas putida in low-water-content habitats. Mol Microbiol (2004) 1.04
Characterization of novel linuron-mineralizing bacterial consortia enriched from long-term linuron-treated agricultural soils. FEMS Microbiol Ecol (2007) 1.02
Multiple DNA extractions coupled with stable-isotope probing of anthracene-degrading bacteria in contaminated soil. Appl Environ Microbiol (2011) 0.99
Identification of Burkholderia multivorans ATCC 17616 genes induced in soil environment by in vivo expression technology. Environ Microbiol (2010) 0.97
Linking of microorganisms to phenanthrene metabolism in soil by analysis of (13)C-labeled cell lipids. Appl Environ Microbiol (2002) 0.96
Differential expression of proteins in cold-adapted log-phase cultures of Escherichia coli incubated at 8, 6 or 2 degrees C. Int J Food Microbiol (2005) 0.92
Proteomic analysis of Escherichia coli biofilms reveals the overexpression of the outer membrane protein OmpA. Proteomics (2006) 0.92
Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii. BMC Microbiol (2011) 0.91
A naturally occurring novel allele of Escherichia coli outer membrane protein A reduces sensitivity to bacteriophage. Appl Environ Microbiol (2006) 0.90
Influence of water limitation on endogenous oxidative stress and cell death within unsaturated Pseudomonas putida biofilms. Environ Microbiol (2009) 0.90
Mineralization of soil-aged isoproturon and isoproturon metabolites by Sphingomonas sp. strain SRS2. J Environ Qual (2003) 0.86
Microbial degradation of street dust polycyclic aromatic hydrocarbons in microcosms simulating diffuse pollution of urban soil. Environ Microbiol (2006) 0.84
Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1. Environ Microbiol (2013) 0.83
Exposure to solute stress affects genome-wide expression but not the polycyclic aromatic hydrocarbon-degrading activity of Sphingomonas sp. strain LH128 in biofilms. Appl Environ Microbiol (2012) 0.82
The atypical two-component sensor kinase Lpl0330 from Legionella pneumophila controls the bifunctional diguanylate cyclase-phosphodiesterase Lpl0329 to modulate bis-(3'-5')-cyclic dimeric GMP synthesis. J Biol Chem (2011) 0.81
Comparison of mineralization of solid-sorbed phenanthrene by polycyclic aromatic hydrocarbon (PAH)-degrading Mycobacterium spp. and Sphingomonas spp. Appl Microbiol Biotechnol (2006) 0.81
Physiology and transcriptome of the polycyclic aromatic hydrocarbon-degrading Sphingomonas sp. LH128 after long-term starvation. Microbiology (2013) 0.80
Using the stress response to monitor process control: pathways to more effective bioremediation. Curr Opin Biotechnol (2006) 0.80
[Stressors, stress reactions, and survival of bacteria (a review)]. Prikl Biokhim Mikrobiol (2004) 0.78
[Polycyclic aromatic hydrocarbons. I. Environmental contamination and environmental exposure]. Acta Medica (Hradec Kralove) Suppl (1999) 0.76
Genomic islands: tools of bacterial horizontal gene transfer and evolution. FEMS Microbiol Rev (2008) 3.80
Quality-controlled small-scale production of a well-defined bacteriophage cocktail for use in human clinical trials. PLoS One (2009) 2.61
Flagella-driven chemotaxis towards exudate components is an important trait for tomato root colonization by Pseudomonas fluorescens. Mol Plant Microbe Interact (2002) 2.42
Bacterial transcriptional regulators for degradation pathways of aromatic compounds. Microbiol Mol Biol Rev (2004) 2.38
MS/MS networking guided analysis of molecule and gene cluster families. Proc Natl Acad Sci U S A (2013) 2.12
The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds. Curr Opin Biotechnol (2003) 1.92
Cloning and characterization of lin genes responsible for the degradation of Hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90. Appl Environ Microbiol (2002) 1.76
The phage therapy paradigm: prêt-à-porter or sur-mesure? Pharm Res (2010) 1.73
Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup. J Bacteriol (2006) 1.72
Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer. J Bacteriol (2004) 1.71
The clc element of Pseudomonas sp. strain B13, a genomic island with various catabolic properties. J Bacteriol (2006) 1.61
Cell differentiation to "mating bodies" induced by an integrating and conjugative element in free-living bacteria. Curr Biol (2013) 1.57
Development of a set of simple bacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water. Environ Sci Technol (2003) 1.53
Position paper: the creation of a rational scheme for the nomenclature of viruses of Bacteria and Archaea. Environ Microbiol (2009) 1.53
T4-related bacteriophage LIMEstone isolates for the control of soft rot on potato caused by 'Dickeya solani'. PLoS One (2012) 1.52
DsrB gene-based DGGE for community and diversity surveys of sulfate-reducing bacteria. J Microbiol Methods (2005) 1.47
Unraveling the secret lives of bacteria: use of in vivo expression technology and differential fluorescence induction promoter traps as tools for exploring niche-specific gene expression. Microbiol Mol Biol Rev (2005) 1.45
Comparative analysis of the widespread and conserved PB1-like viruses infecting Pseudomonas aeruginosa. Environ Microbiol (2009) 1.39
Muralytic activity and modular structure of the endolysins of Pseudomonas aeruginosa bacteriophages phiKZ and EL. Mol Microbiol (2007) 1.34
The genome and structural proteome of YuA, a new Pseudomonas aeruginosa phage resembling M6. J Bacteriol (2007) 1.31
Bacteria killing their own kind: novel bacteriocins of Pseudomonas and other gamma-proteobacteria. Trends Microbiol (2002) 1.30
Molecular and physiological analysis of three Pseudomonas aeruginosa phages belonging to the "N4-like viruses". Virology (2010) 1.30
Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A. Appl Environ Microbiol (2005) 1.29
Bacteriophages of Pseudomonas. Future Microbiol (2010) 1.28
Ribosomally encoded antibacterial proteins and peptides from Pseudomonas. FEMS Microbiol Rev (2014) 1.27
Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi. ISME J (2010) 1.26
The T7-related Pseudomonas putida phage φ15 displays virion-associated biofilm degradation properties. PLoS One (2011) 1.25
Occurrence and phylogenetic diversity of Sphingomonas strains in soils contaminated with polycyclic aromatic hydrocarbons. Appl Environ Microbiol (2004) 1.22
Microbial community structure of a heavy fuel oil-degrading marine consortium: linking microbial dynamics with polycyclic aromatic hydrocarbon utilization. FEMS Microbiol Ecol (2010) 1.20
Predicting in vivo efficacy of therapeutic bacteriophages used to treat pulmonary infections. Antimicrob Agents Chemother (2013) 1.19
Whole-cell living biosensors--are they ready for environmental application? Appl Microbiol Biotechnol (2006) 1.17
Genomic and proteomic characterization of the broad-host-range Salmonella phage PVP-SE1: creation of a new phage genus. J Virol (2011) 1.17
The biphenyl- and 4-chlorobiphenyl-catabolic transposon Tn4371, a member of a new family of genomic islands related to IncP and Ti plasmids. Appl Environ Microbiol (2003) 1.16
Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13. Mol Microbiol (2009) 1.15
A suggested new bacteriophage genus: "Viunalikevirus". Arch Virol (2012) 1.15
Survey of Pseudomonas aeruginosa and its phages: de novo peptide sequencing as a novel tool to assess the diversity of worldwide collected viruses. Environ Microbiol (2009) 1.15
Genome comparison of Pseudomonas aeruginosa large phages. J Mol Biol (2005) 1.14
Plant lectin-like bacteriocin from a rhizosphere-colonizing Pseudomonas isolate. J Bacteriol (2003) 1.12
Phenotypic and genotypic variations within a single bacteriophage species. Virol J (2011) 1.12
Catabolic mobile genetic elements and their potential use in bioaugmentation of polluted soils and waters. FEMS Microbiol Ecol (2002) 1.11
Use of flow cytometric methods for single-cell analysis in environmental microbiology. Curr Opin Microbiol (2008) 1.11
Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1. Proc Natl Acad Sci U S A (2008) 1.10
Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds. J Bacteriol (2012) 1.10
The intron-containing genome of the lytic Pseudomonas phage LUZ24 resembles the temperate phage PaP3. Virology (2008) 1.08
Bacteria, not archaea, restore nitrification in a zinc-contaminated soil. ISME J (2009) 1.08
Occurrence and community composition of fast-growing Mycobacterium in soils contaminated with polycyclic aromatic hydrocarbons. FEMS Microbiol Ecol (2005) 1.08
Genome-Wide Analysis of Salicylate and Dibenzofuran Metabolism in Sphingomonas Wittichii RW1. Front Microbiol (2012) 1.07
The role of interactions between phage and bacterial proteins within the infected cell: a diverse and puzzling interactome. Environ Microbiol (2009) 1.07
Isolation and purification of a new kalimantacin/batumin-related polyketide antibiotic and elucidation of its biosynthesis gene cluster. Chem Biol (2010) 1.07
Microbiological and molecular assessment of bacteriophage ISP for the control of Staphylococcus aureus. PLoS One (2011) 1.05
Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5. Appl Environ Microbiol (2005) 1.05
Genetic analysis of phenoxyalkanoic acid degradation in Sphingomonas herbicidovorans MH. Appl Environ Microbiol (2004) 1.04
Call for a dedicated European legal framework for bacteriophage therapy. Arch Immunol Ther Exp (Warsz) (2014) 1.04
Massive activation of archaeal defense genes during viral infection. J Virol (2013) 1.03
Bacterial community structure of a pesticide-contaminated site and assessment of changes induced in community structure during bioremediation. FEMS Microbiol Ecol (2006) 1.03
A dual functional origin of transfer in the ICEclc genomic island of Pseudomonas knackmussii B13. Mol Microbiol (2010) 1.02
Characterization of novel linuron-mineralizing bacterial consortia enriched from long-term linuron-treated agricultural soils. FEMS Microbiol Ecol (2007) 1.02
Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas. Proc Natl Acad Sci U S A (2008) 1.01
A standardized approach for accurate quantification of murein hydrolase activity in high-throughput assays. J Biochem Biophys Methods (2006) 1.01
The N-terminal coiled coil of the Rhodococcus erythropolis ARC AAA ATPase is neither necessary for oligomerization nor nucleotide hydrolysis. J Struct Biol (2004) 1.01
Complete genome sequence of the giant virus OBP and comparative genome analysis of the diverse ΦKZ-related phages. J Virol (2011) 1.01
Development and application of a dapB-based in vivo expression technology system to study colonization of rice by the endophytic nitrogen-fixing bacterium Pseudomonas stutzeri A15. Appl Environ Microbiol (2003) 1.01
Expression of a novel P22 ORFan gene reveals the phage carrier state in Salmonella typhimurium. PLoS Genet (2013) 1.00
Learning from bacteriophages - advantages and limitations of phage and phage-encoded protein applications. Curr Protein Pept Sci (2012) 1.00
Characterization of modular bacteriophage endolysins from Myoviridae phages OBP, 201φ2-1 and PVP-SE1. PLoS One (2012) 1.00
Functional genomic analysis of two Staphylococcus aureus phages isolated from the dairy environment. Appl Environ Microbiol (2009) 1.00
The high-affinity peptidoglycan binding domain of Pseudomonas phage endolysin KZ144. Biochem Biophys Res Commun (2009) 0.99
A PKS/NRPS/FAS hybrid gene cluster from Serratia plymuthica RVH1 encoding the biosynthesis of three broad spectrum, zeamine-related antibiotics. PLoS One (2013) 0.98
Distribution of the Mycobacterium community and polycyclic aromatic hydrocarbons (PAHs) among different size fractions of a long-term PAH-contaminated soil. Environ Microbiol (2006) 0.98
The adsorption of Pseudomonas aeruginosa bacteriophage phiKMV is dependent on expression regulation of type IV pili genes. FEMS Microbiol Lett (2009) 0.98
The SPO1-related bacteriophages. Arch Virol (2010) 0.98
Characterization of five novel endolysins from Gram-negative infecting bacteriophages. Appl Microbiol Biotechnol (2012) 0.97
Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation with Sphingobium indicum B90A. Biodegradation (2007) 0.97
Overview of on-farm bioremediation systems to reduce the occurrence of point source contamination. Pest Manag Sci (2007) 0.97
Bacteriophages LIMElight and LIMEzero of Pantoea agglomerans, belonging to the "phiKMV-like viruses". Appl Environ Microbiol (2011) 0.97
The antimicrobial compound xantholysin defines a new group of Pseudomonas cyclic lipopeptides. PLoS One (2013) 0.97
Purification and characterization of two enantioselective alpha-ketoglutarate-dependent dioxygenases, RdpA and SdpA, from Sphingomonas herbicidovorans MH. Appl Environ Microbiol (2006) 0.97
Food applications of bacterial cell wall hydrolases. Curr Opin Biotechnol (2010) 0.96
Romulus and Remus, two phage isolates representing a distinct clade within the Twortlikevirus genus, display suitable properties for phage therapy applications. J Virol (2013) 0.95
Architecture and spatial organization in a triple-species bacterial biofilm synergistically degrading the phenylurea herbicide linuron. FEMS Microbiol Ecol (2008) 0.95
Elucidation of the metabolic pathway of fluorene and cometabolic pathways of phenanthrene, fluoranthene, anthracene and dibenzothiophene by Sphingomonas sp. LB126. Res Microbiol (2003) 0.95
Breaking barriers: expansion of the use of endolysins as novel antibacterials against Gram-negative bacteria. Future Microbiol (2015) 0.95
Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria. Environ Sci Technol (2012) 0.95
Determinants of the microbial community structure of eutrophic, hyporheic river sediments polluted with chlorinated aliphatic hydrocarbons. FEMS Microbiol Ecol (2013) 0.95
A novel hydrolase identified by genomic-proteomic analysis of phenylurea herbicide mineralization by Variovorax sp. strain SRS16. Appl Environ Microbiol (2011) 0.94
The kalimantacin/batumin biosynthesis operon encodes a self-resistance isoform of the FabI bacterial target. Chem Biol (2010) 0.94
Representational Difference Analysis (RDA) of bacteriophage genomes. J Microbiol Methods (2009) 0.94
Genomes of "phiKMV-like viruses" of Pseudomonas aeruginosa contain localized single-strand interruptions. Virology (2009) 0.94
Structural determinants for activity and specificity of the bacterial toxin LlpA. PLoS Pathog (2013) 0.94
A suggested classification for two groups of Campylobacter myoviruses. Arch Virol (2013) 0.94
Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers. Appl Environ Microbiol (2004) 0.93
Long-term exposure to elevated zinc concentrations induced structural changes and zinc tolerance of the nitrifying community in soil. Environ Microbiol (2006) 0.93
Quality and safety requirements for sustainable phage therapy products. Pharm Res (2015) 0.93
Streptomycin as a selective agent to facilitate recovery and isolation of introduced and indigenous Sphingomonas from environmental samples. Environ Microbiol (2004) 0.93