Published in J Virol on April 30, 2014
Multiple layers of chimerism in a single-stranded DNA virus discovered by deep sequencing. Genome Biol Evol (2015) 0.81
RNA Silencing May Play a Role in but Is Not the Only Determinant of the Multiplicity of Infection. J Virol (2015) 0.75
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97
The evolutionary advantage of recombination. Genetics (1974) 11.65
Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci U S A (1999) 7.65
UNAFold: software for nucleic acid folding and hybridization. Methods Mol Biol (2008) 6.83
Interference among deleterious mutations favours sex and recombination in finite populations. Nature (2006) 2.63
The contribution of epistasis to the architecture of fitness in an RNA virus. Proc Natl Acad Sci U S A (2004) 2.35
Experimental tests of the adaptive significance of sexual recombination. Nat Rev Genet (2002) 1.94
Evidence that a plant virus switched hosts to infect a vertebrate and then recombined with a vertebrate-infecting virus. Proc Natl Acad Sci U S A (1999) 1.85
A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase. J Virol Methods (2004) 1.82
Widely conserved recombination patterns among single-stranded DNA viruses. J Virol (2008) 1.78
"Agroinfection," an alternative route for viral infection of plants by using the Ti plasmid. Proc Natl Acad Sci U S A (1986) 1.69
A novel virus genome discovered in an extreme environment suggests recombination between unrelated groups of RNA and DNA viruses. Biol Direct (2012) 1.63
Avoidance of protein fold disruption in natural virus recombinants. PLoS Pathog (2007) 1.62
The spread of tomato yellow leaf curl virus from the Middle East to the world. PLoS Pathog (2010) 1.62
Molecular mechanisms of recombination restriction in the envelope gene of the human immunodeficiency virus. PLoS Pathog (2009) 1.45
Sequences from ancestral single-stranded DNA viruses in vertebrate genomes: the parvoviridae and circoviridae are more than 40 to 50 million years old. J Virol (2010) 1.38
The evolutionary value of recombination is constrained by genome modularity. PLoS Genet (2005) 1.26
Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes. PLoS One (2011) 1.18
Effects of random mutations in the human immunodeficiency virus type 1 transcriptional promoter on viral fitness in different host cell environments. J Virol (2006) 1.16
Frequent occurrence of recombinants in mixed infections of tomato yellow leaf curl disease-associated begomoviruses. Virology (2007) 1.16
Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen. J Gen Virol (2008) 1.12
Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus. Heredity (Edinb) (2012) 1.11
Constraints to genetic exchange support gene coadaptation in a tripartite RNA virus. PLoS Pathog (2007) 1.07
Complex recombination patterns arising during geminivirus coinfections preserve and demarcate biologically important intra-genome interaction networks. PLoS Pathog (2011) 1.05
Microcomputer-Based Quantification of Maize Streak Virus Symptoms in Zea mays. Phytopathology (1998) 1.05
A protocol for the rapid isolation of full geminivirus genomes from dried plant tissue. J Virol Methods (2008) 1.05
Simple genomes, complex interactions: epistasis in RNA virus. Chaos (2010) 1.03
A nanovirus-like DNA component associated with yellow vein disease of Ageratum conyzoides: evidence for interfamilial recombination between plant DNA viruses. Virology (1999) 1.02
Successful application of FTA Classic Card technology and use of bacteriophage phi29 DNA polymerase for large-scale field sampling and cloning of complete maize streak virus genomes. J Virol Methods (2006) 1.00
Rapid host adaptation by extensive recombination. J Gen Virol (2009) 1.00
A three-nucleotide mutation altering the Maize streak virus Rep pRBR-interaction motif reduces symptom severity in maize and partially reverts at high frequency without restoring pRBR-Rep binding. J Gen Virol (2005) 0.99
Widespread endogenization of densoviruses and parvoviruses in animal and human genomes. J Virol (2011) 0.99
Genetic analysis of maize streak virus isolates from Uganda reveals widespread distribution of a recombinant variant. J Gen Virol (2007) 0.98
Investigation of Maize streak virus pathogenicity determinants using chimaeric genomes. Virology (2002) 0.97
Sequence diversity and virulence in Zea mays of Maize streak virus isolates. Virology (2001) 0.96
Epistasis among deleterious mutations in the HIV-1 protease. J Mol Biol (2009) 0.96
Restoration of native folding of single-stranded DNA sequences through reverse mutations: an indication of a new epigenetic mechanism. Arch Biochem Biophys (2006) 0.95
Genic incompatibilities in two hybrid bacteriophages. Mol Biol Evol (2009) 0.93
Forced recombination between distinct strains of Maize streak virus. J Gen Virol (2001) 0.92
Evaluation of Maize Streak Virus Pathogenicity in Differentially Resistant Zea mays Genotypes. Phytopathology (1999) 0.87
Compensatory evolution in response to a novel RNA polymerase: orthologous replacement of a central network gene. Mol Biol Evol (2007) 0.87
Biological and Genomic Sequence Characterization of Maize streak virus Isolates from Wheat. Phytopathology (2002) 0.85
Genetic diversity and recombination analysis of sweepoviruses from Brazil. Virol J (2012) 0.84
Analysis of the diversity of African streak mastreviruses using PCR-generated RFLPs and partial sequence data. J Virol Methods (2001) 0.82
A rep-based hairpin inhibits replication of diverse maize streak virus isolates in a transient assay. J Gen Virol (2011) 0.82
Recombination hotspots and host susceptibility modulate the adaptive value of recombination during maize streak virus evolution. BMC Evol Biol (2011) 0.82
Constraints from protein structure and intra-molecular coevolution influence the fitness of HIV-1 recombinants. Virology (2014) 0.82
Evolutionary recovery of a recombinant viral genome. G3 (Bethesda) (2012) 0.79
Replication modes of Maize streak virus mutants lacking RepA or the RepA-pRBR interaction motif. Virology (2013) 0.78
A novel maize-infecting mastrevirus from La Réunion Island. Arch Virol (2012) 0.77