Published in Biotechnol Biofuels on June 12, 2014
Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends. Microb Biotechnol (2015) 0.93
Unveiling the metabolic potential of two soil-derived microbial consortia selected on wheat straw. Sci Rep (2015) 0.87
Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems. Sci Rep (2016) 0.86
Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida. Microbiologyopen (2015) 0.80
Towards an Enhanced Understanding of Plant-Microbiome Interactions to Improve Phytoremediation: Engineering the Metaorganism. Front Microbiol (2016) 0.80
Characterization of three plant biomass-degrading microbial consortia by metagenomics- and metasecretomics-based approaches. Appl Microbiol Biotechnol (2016) 0.78
Metasecretome analysis of a lignocellulolytic microbial consortium grown on wheat straw, xylan and xylose. Biotechnol Biofuels (2015) 0.78
Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics. Sci Rep (2016) 0.77
Preservation of microbial communities enriched on lignocellulose under thermophilic and high-solid conditions. Biotechnol Biofuels (2015) 0.77
Metagenomic and metaproteomic analyses of a corn stover-adapted microbial consortium EMSD5 reveal its taxonomic and enzymatic basis for degrading lignocellulose. Biotechnol Biofuels (2016) 0.76
Substrate-Driven Convergence of the Microbial Community in Lignocellulose-Amended Enrichments of Gut Microflora from the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus). Front Microbiol (2016) 0.76
A multi-substrate approach for functional metagenomics-based screening for (hemi)cellulases in two wheat straw-degrading microbial consortia unveils novel thermoalkaliphilic enzymes. BMC Genomics (2016) 0.76
In-situ Adsorption-Biological Combined Technology Treating Sediment Phosphorus in all Fractions. Sci Rep (2016) 0.75
Methanosarcina Play an Important Role in Anaerobic Co-Digestion of the Seaweed Ulva lactuca: Taxonomy and Predicted Metabolism of Functional Microbial Communities. PLoS One (2015) 0.75
Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures. PLoS One (2016) 0.75
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97
QIIME allows analysis of high-throughput community sequencing data. Nat Methods (2010) 85.34
Search and clustering orders of magnitude faster than BLAST. Bioinformatics (2010) 51.97
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res (2008) 27.83
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res (2011) 17.21
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J (2011) 13.64
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat Biotechnol (2013) 11.05
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies. Nucleic Acids Res (2012) 6.21
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnol Biofuels (2013) 3.30
Active and total microbial communities in forest soil are largely different and highly stratified during decomposition. ISME J (2011) 2.48
An insect herbivore microbiome with high plant biomass-degrading capacity. PLoS Genet (2010) 2.28
Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. Appl Environ Microbiol (2009) 2.11
Isolation of microorganisms for biological detoxification of lignocellulosic hydrolysates. Appl Microbiol Biotechnol (2003) 1.47
Fungal community on decomposing leaf litter undergoes rapid successional changes. ISME J (2012) 1.46
Improved selection of internal transcribed spacer-specific primers enables quantitative, ultra-high-throughput profiling of fungal communities. Appl Environ Microbiol (2013) 1.46
Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers. FEMS Microbiol Ecol (2012) 1.46
A review of enzymes and microbes for lignocellulosic biorefinery and the possibility of their application to consolidated bioprocessing technology. Bioresour Technol (2012) 1.39
Methodological considerations for the use of stable isotope probing in microbial ecology. Microb Ecol (2006) 1.36
Alternatives to Trichoderma reesei in biofuel production. Trends Biotechnol (2011) 1.34
Phylogenetic distribution of potential cellulases in bacteria. Appl Environ Microbiol (2012) 1.33
Integrative analysis of the microbiome and metabolome of the human intestinal mucosal surface reveals exquisite inter-relationships. Microbiome (2013) 1.32
Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing. Biotechnol Biofuels (2012) 1.31
Complete genome sequence of "Enterobacter lignolyticus" SCF1. Stand Genomic Sci (2011) 1.24
Enzymatic hydrolyzing performance of Acremonium cellulolyticus and Trichoderma reesei against three lignocellulosic materials. Biotechnol Biofuels (2009) 1.18
Screening of oleaginous yeast strains tolerant to lignocellulose degradation compounds. Appl Biochem Biotechnol (2009) 1.15
Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens. ISME J (2012) 1.15
Beta galactosidases and their potential applications: a review. Crit Rev Biotechnol (2010) 1.13
Developing symbiotic consortia for lignocellulosic biofuel production. Appl Microbiol Biotechnol (2012) 1.12
Characterization of trapped lignin-degrading microbes in tropical forest soil. PLoS One (2011) 1.11
Novel multispecies microbial consortia involved in lignocellulose and 5-hydroxymethylfurfural bioconversion. Appl Microbiol Biotechnol (2013) 1.10
Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing. Appl Environ Microbiol (2012) 1.06
Waste valorization by biotechnological conversion into added value products. Appl Microbiol Biotechnol (2013) 1.06
The metagenome of an anaerobic microbial community decomposing poplar wood chips. PLoS One (2012) 1.05
Bacterial populations and environmental factors controlling cellulose degradation in an acidic Sphagnum peat. Environ Microbiol (2011) 1.05
Bacterial decolorization and detoxification of black liquor from rayon grade pulp manufacturing paper industry and detection of their metabolic products. Bioresour Technol (2011) 1.03
Selection and characteristics of a switchgrass-colonizing microbial community to produce extracellular cellulases and xylanases. Bioresour Technol (2010) 1.01
Alpha-L-arabinofuranosidases: the potential applications in biotechnology. J Ind Microbiol Biotechnol (2005) 1.00
Consortia-mediated bioprocessing of cellulose to ethanol with a symbiotic Clostridium phytofermentans/yeast co-culture. Biotechnol Biofuels (2013) 0.97
Biodiversity characterization of cellulolytic bacteria present on native Chaco soil by comparison of ribosomal RNA genes. Res Microbiol (2011) 0.97
Characterization of a defined cellulolytic and xylanolytic bacterial consortium for bioprocessing of cellulose and hemicelluloses. Appl Biochem Biotechnol (2010) 0.97
Molecular and biochemical characterization of a novel xylanase from the symbiotic Sphingobacterium sp. TN19. Appl Microbiol Biotechnol (2009) 0.96
Metagenomic profiling reveals lignocellulose degrading system in a microbial community associated with a wood-feeding beetle. PLoS One (2013) 0.95
Targeted metagenomics: a high-resolution metagenomics approach for specific gene clusters in complex microbial communities. Environ Microbiol (2011) 0.95
Weedy lignocellulosic feedstock and microbial metabolic engineering: advancing the generation of 'Biofuel'. Appl Microbiol Biotechnol (2010) 0.95
Endowing non-cellulolytic microorganisms with cellulolytic activity aiming for consolidated bioprocessing. Biotechnol Adv (2013) 0.93
Bioconversion of un-pretreated lignocellulosic materials by a microbial consortium XDC-2. Bioresour Technol (2013) 0.92
Comparative metagenomic analysis of microcosm structures and lignocellulolytic enzyme systems of symbiotic biomass-degrading consortia. Appl Microbiol Biotechnol (2013) 0.91
Occurrence and biocatalytic potential of carbohydrate oxidases. Adv Appl Microbiol (2006) 0.90
Yeasts in an industrial malting ecosystem. J Ind Microbiol Biotechnol (2006) 0.89
Development of highly efficient, low-cost lignocellulolytic enzyme systems in the post-genomic era. Biotechnol Adv (2013) 0.89
Ascomycota members dominate fungal communities during straw residue decomposition in arable soil. PLoS One (2013) 0.85
Thermally treated grass fibers as colonizable substrate for beneficial bacterial inoculum. Microb Ecol (2008) 0.85
A novel lignin degradation bacterial consortium for efficient pulping. Bioresour Technol (2013) 0.84
Beta-xylosidase activity of a GH3 glucosidase/xylosidase from yak rumen metagenome promotes the enzymatic degradation of hemicellulosic xylans. Lett Appl Microbiol (2011) 0.83
Novel bacterial peroxidase without catalase activity from Flavobacterium meningosepticum: purification and characterization. Biochim Biophys Acta (1999) 0.83
α-L-fucosidase from Paenibacillus thiaminolyticus: its hydrolytic and transglycosylation abilities. Glycobiology (2013) 0.82
Unconventional approaches to isolation and enrichment of functional microbial consortium--a review. Bioresour Technol (2013) 0.82
Sphingobacterium kitahiroshimense sp. nov., isolated from soil. Int J Syst Evol Microbiol (2008) 0.81
Phylogenetic analysis and metabolic potential of microbial communities in an industrial bagasse collection site. Microb Ecol (2013) 0.81
High-coverage gene expression profiling analysis of the cellulase-producing fungus Acremonium cellulolyticus cultured using different carbon sources. Appl Microbiol Biotechnol (2013) 0.79
A versatile and robust aerotolerant microbial community capable of cellulosic ethanol production. Bioresour Technol (2012) 0.79
Biotechnology of non-Saccharomyces yeasts-the basidiomycetes. Appl Microbiol Biotechnol (2013) 0.78
Characterization of cellulolytic activities of environmental bacterial consortia from an Argentinian native forest. Curr Microbiol (2013) 0.78
Trichosporon xylopini sp. nov., a hemicellulose-degrading yeast isolated from the wood-inhabiting beetle Xylopinus saperdioides. Int J Syst Evol Microbiol (2010) 0.77
Exploration of the key microbes involved in the cellulolytic activity of a microbial consortium by serial dilution. Bioresour Technol (2012) 0.76
Two Trichosporon species isolated from Central-European mygalomorph spiders (Araneae: Mygalomorphae). Antonie Van Leeuwenhoek (2012) 0.76
Three dimensional structure of a bacterial α-l-fucosidase with a 5-membered iminocyclitol inhibitor. Bioorg Med Chem (2013) 0.76