Transcriptomic responses of Phanerochaete chrysosporium to oak acetonic extracts: focus on a new glutathione transferase.

PubWeight™: 0.88‹?›

🔗 View Article (PMC 4178660)

Published in Appl Environ Microbiol on August 08, 2014

Authors

Anne Thuillier1, Kamel Chibani1, Gemma Belli2, Enrique Herrero2, Stéphane Dumarçay3, Philippe Gérardin3, Annegret Kohler1, Aurélie Deroy1, Tiphaine Dhalleine1, Raphael Bchini1, Jean-Pierre Jacquot1, Eric Gelhaye1, Mélanie Morel-Rouhier4

Author Affiliations

1: Université de Lorraine, IAM, UMR 1136, IFR 110 EFABA, Champenoux, France INRA, IAM, UMR 1136, Vandoeuvre-les-Nancy, France.
2: Departament de Ciències Mèdiques Bàsiques, Universitat de Lleida, IRB Lleida, Lleida, Spain.
3: Université de Lorraine, LERMAB, UMR 1093, Faculté des Sciences et Technologies, Vandoeuvre-lès-Nancy, France.
4: Université de Lorraine, IAM, UMR 1136, IFR 110 EFABA, Champenoux, France INRA, IAM, UMR 1136, Vandoeuvre-les-Nancy, France Melanie.Morel@univ-lorraine.fr.

Articles cited by this

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes. Bioinformatics (2001) 16.47

Chemistry and biochemistry of 4-hydroxynonenal, malonaldehyde and related aldehydes. Free Radic Biol Med (1991) 16.01

Getting started with yeast. Methods Enzymol (2002) 6.60

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (2012) 4.93

Methionine residues as endogenous antioxidants in proteins. Proc Natl Acad Sci U S A (1996) 3.78

The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res (2011) 3.26

Improved high-level expression system for eukaryotic genes in Escherichia coli using T7 RNA polymerase and rare ArgtRNAs. Biotechniques (1995) 2.94

The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science (2011) 2.67

A secreted effector protein of Laccaria bicolor is required for symbiosis development. Curr Biol (2011) 2.33

4-Hydroxyalk-2-enals are substrates for glutathione transferase. FEBS Lett (1985) 2.21

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proc Natl Acad Sci U S A (2012) 1.61

Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression. Appl Environ Microbiol (2009) 1.44

Regulation of 4-hydroxynonenal-mediated signaling by glutathione S-transferases. Free Radic Biol Med (2004) 1.40

Interaction of plant polyphenols with salivary proteins. Crit Rev Oral Biol Med (2002) 1.38

Role of the yeast acetyltransferase Mpr1 in oxidative stress: regulation of oxygen reactive species caused by a toxic proline catabolism intermediate. Proc Natl Acad Sci U S A (2004) 1.33

Genome-wide structural and evolutionary analysis of the P450 monooxygenase genes (P450ome) in the white rot fungus Phanerochaete chrysosporium: evidence for gene duplications and extensive gene clustering. BMC Genomics (2005) 1.27

A novel membrane-bound glutathione S-transferase functions in the stationary phase of the yeast Saccharomyces cerevisiae. J Biol Chem (1998) 1.23

The yeast prion protein Ure2 shows glutathione peroxidase activity in both native and fibrillar forms. J Biol Chem (2004) 1.20

Saccharomyces cerevisiae cells have three Omega class glutathione S-transferases acting as 1-Cys thiol transferases. Biochem J (2006) 1.18

A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust). Mol Plant Microbe Interact (2012) 1.18

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC Genomics (2012) 1.14

Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site. J Biol Chem (2009) 1.12

Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs). Biochem Biophys Res Commun (2010) 1.10

Laccase and its role in production of extracellular reactive oxygen species during wood decay by the brown rot basidiomycete Postia placenta. Appl Environ Microbiol (2010) 1.10

The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak. Curr Genet (2009) 1.08

GPX2, encoding a phospholipid hydroperoxide glutathione peroxidase homologue, codes for an atypical 2-Cys peroxiredoxin in Saccharomyces cerevisiae. J Biol Chem (2005) 1.05

Bioinformatic and enzymatic characterization of the MAPEG superfamily. FEBS J (2005) 1.05

P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium. Crit Rev Microbiol (2012) 1.02

Role of yeast glutaredoxins as glutathione S-transferases. J Biol Chem (2003) 1.02

Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar. BMC Plant Biol (2011) 0.99

Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of Aspen. Plant Cell Physiol (2005) 0.98

A peroxisomal glutathione transferase of Saccharomyces cerevisiae is functionally related to sulfur amino acid metabolism. Eukaryot Cell (2006) 0.97

Role of P450 monooxygenases in the degradation of the endocrine-disrupting chemical nonylphenol by the white rot fungus Phanerochaete chrysosporium. Appl Environ Microbiol (2009) 0.96

Expression pattern of cellulolytic and xylanolytic genes regulated by transcriptional factors XYR1 and CRE1 are affected by carbon source in Trichoderma reesei. Gene Expr Patterns (2014) 0.95

The fungal glutathione S-transferase system. Evidence of new classes in the wood-degrading basidiomycete Phanerochaete chrysosporium. Cell Mol Life Sci (2009) 0.93

Xenomic networks variability and adaptation traits in wood decaying fungi. Microb Biotechnol (2013) 0.93

CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. Appl Environ Microbiol (2013) 0.92

Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: involvement of versatile monooxygenase. Biochem Biophys Res Commun (2011) 0.92

Systematic identification and evolutionary analysis of catalytically versatile cytochrome p450 monooxygenase families enriched in model basidiomycete fungi. PLoS One (2014) 0.90

Phanerochaete chrysosporium soluble proteome as a prelude for the analysis of heavy metal stress response. Proteomics (2007) 0.90

Syringyl-rich lignin renders poplars more resistant to degradation by wood decay fungi. Appl Environ Microbiol (2013) 0.90

Glutaredoxins in fungi. Photosynth Res (2006) 0.89

Characterization of a Phanerochaete chrysosporium glutathione transferase reveals a novel structural and functional class with ligandin properties. J Biol Chem (2012) 0.89

Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium. Appl Microbiol Biotechnol (2010) 0.88

Spatial mapping of extracellular oxidant production by a white rot basidiomycete on wood reveals details of ligninolytic mechanism. Environ Microbiol (2012) 0.87

Reactive oxygen species and induction of lignin peroxidase in Phanerochaete chrysosporium. Appl Environ Microbiol (2003) 0.87

Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium. New Phytol (2008) 0.86

Expression and regulation of genes encoding lignocellulose-degrading activity in the genus Phanerochaete. Appl Microbiol Biotechnol (2012) 0.84

Involvement of glutathione transferases, Gtt1and Gtt2, with oxidative stress response generated by H2O2 during growth of Saccharomyces cerevisiae. Redox Rep (2008) 0.84

In situ antioxidant and antimicrobial activities of naturally occurring caffeic acid, p-coumaric acid and rutin, using food systems. J Sci Food Agric (2013) 0.84

Diversification of fungal specific class a glutathione transferases in saprotrophic fungi. PLoS One (2013) 0.84

Evolutionary analysis of hydrophobin gene family in two wood-degrading basidiomycetes, Phlebia brevispora and Heterobasidion annosum s.l. BMC Evol Biol (2013) 0.82

Structures of yeast glutathione-S-transferase Gtt2 reveal a new catalytic type of GST family. EMBO Rep (2009) 0.79

Comparative genomics and evolutionary analysis of hydrophobins from three species of wood-degrading fungi. Mycologia (2013) 0.78

Elimination and detoxification of softwood extractives by white-rot fungi. J Biotechnol (2000) 0.78