Published in Gut on January 16, 2015
Relationship Between Microbiota of the Colonic Mucosa vs Feces and Symptoms, Colonic Transit, and Methane Production in Female Patients With Chronic Constipation. Gastroenterology (2015) 1.56
The microbiota-derived metabolite indole decreases mucosal inflammation and injury in a murine model of NSAID enteropathy. Gut Microbes (2016) 0.86
Mucin-Microbiota Interaction During Postnatal Maturation of the Intestinal Ecosystem: Clinical Implications. Dig Dis Sci (2016) 0.78
Shigella Diversity and Changing Landscape: Insights for the Twenty-First Century. Front Cell Infect Microbiol (2016) 0.78
Mucosal Prevalence and Interactions with the Epithelium Indicate Commensalism of Sutterella spp. Front Microbiol (2016) 0.76
Investigation of sinonasal microbiome spatial organization in chronic rhinosinusitis. Int Forum Allergy Rhinol (2016) 0.75
Modeling environmental risk factors of autism in mice induces IBD-related gut microbial dysbiosis and hyperserotonemia. Mol Brain (2017) 0.75
Oral administration of a select mixture of Bacillus probiotics affects the gut microbiota and goblet cell function in newly weaned MUC4 resistant pigs following Escherichia coli challenge. Appl Environ Microbiol (2016) 0.75
Does the intestinal microbial community of Korean Crohn's disease patients differ from that of western patients? BMC Gastroenterol (2016) 0.75
Colonic biogeography in health and ulcerative colitis. Gut Microbes (2016) 0.75
Sampling Strategies for Three-Dimensional Spatial Community Structures in IBD Microbiota Research. Front Cell Infect Microbiol (2017) 0.75
Prevalence of pks-positive Escherichia coli in Japanese patients with or without colorectal cancer. Gut Pathog (2017) 0.75
A clinician's guide to microbiome analysis. Nat Rev Gastroenterol Hepatol (2017) 0.75
QIIME allows analysis of high-throughput community sequencing data. Nat Methods (2010) 85.34
Diversity of the human intestinal microbial flora. Science (2005) 49.64
Obesity alters gut microbial ecology. Proc Natl Acad Sci U S A (2005) 33.66
FastTree 2--approximately maximum-likelihood trees for large alignments. PLoS One (2010) 26.15
Enterotypes of the human gut microbiome. Nature (2011) 24.36
Human gut microbiome viewed across age and geography. Nature (2012) 19.31
Integrative analysis of environmental sequences using MEGAN4. Genome Res (2011) 8.60
Gut microbiota composition correlates with diet and health in the elderly. Nature (2012) 6.94
Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol (2002) 6.74
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity. Proc Natl Acad Sci U S A (2013) 5.88
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol (2012) 5.66
Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/- mice. Nature (2012) 5.63
Composition, variability, and temporal stability of the intestinal microbiota of the elderly. Proc Natl Acad Sci U S A (2010) 5.02
Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine. PLoS One (2009) 4.93
Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease. Proc Natl Acad Sci U S A (2011) 4.53
The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host-microbial interactions. Proc Natl Acad Sci U S A (2010) 4.35
KING (Kinemage, Next Generation): a versatile interactive molecular and scientific visualization program. Protein Sci (2009) 4.21
A reproducible grading scale for histological assessment of inflammation in ulcerative colitis. Gut (2000) 3.69
Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria. Am J Gastroenterol (2010) 3.32
Effects of lactulose and other laxatives on ileal and colonic pH as measured by a radiotelemetry device. Gut (1974) 2.89
Comparison of fermentation reactions in different regions of the human colon. J Appl Bacteriol (1992) 2.87
Bacterial biogeography of the human digestive tract. Sci Rep (2011) 2.18
Comparative study of the intestinal mucus barrier in normal and inflamed colon. Gut (2006) 1.81
Phylogenetic analysis of dysbiosis in ulcerative colitis during remission. Inflamm Bowel Dis (2013) 1.63
Modelling the effect of directional spatial ecological processes at different scales. Oecologia (2010) 1.54
Microbiota of de-novo pediatric IBD: increased Faecalibacterium prausnitzii and reduced bacterial diversity in Crohn's but not in ulcerative colitis. Am J Gastroenterol (2012) 1.54
Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PLoS One (2011) 1.38
Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota. ISME J (2013) 1.10
Laser capture microdissection and metagenomic analysis of intact mucosa-associated microbial communities of human colon. Appl Microbiol Biotechnol (2010) 1.05
Characterization of adherent-invasive Escherichia coli isolated from pediatric patients with inflammatory bowel disease. Inflamm Bowel Dis (2011) 0.99
Gram-negative bacteria account for main differences between faecal microbiota from patients with ulcerative colitis and healthy controls. Benef Microbes (2012) 0.97
Depth-dependent differences in community structure of the human colonic microbiota in health. PLoS One (2013) 0.80