Investigation of genes encoding calcineurin B-like protein family in legumes and their expression analyses in chickpea (Cicer arietinum L.).

PubWeight™: 0.81‹?›

🔗 View Article (PMC 4390317)

Published in PLoS One on April 08, 2015

Authors

Mukesh Kumar Meena1, Sanjay Ghawana1, Atish Sardar1, Vikas Dwivedi1, Hitaishi Khandal1, Riti Roy1, Debasis Chattopadhyay1

Author Affiliations

1: National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India.

Articles cited by this

The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol (1987) 266.90

Clustal W and Clustal X version 2.0. Bioinformatics (2007) 126.47

MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol (2013) 112.81

Protein structure prediction on the Web: a case study using the Phyre server. Nat Protoc (2009) 32.64

The evolutionary fate and consequences of duplicate genes. Science (2000) 24.22

Pfam: the protein families database. Nucleic Acids Res (2013) 22.48

Primer3--new capabilities and interfaces. Nucleic Acids Res (2012) 20.34

Genome sequence of the palaeopolyploid soybean. Nature (2010) 17.82

Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res (1999) 13.02

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Nucleic Acids Res (2006) 8.36

Blast2GO: A comprehensive suite for functional analysis in plant genomics. Int J Plant Genomics (2008) 7.12

A calcium sensor homolog required for plant salt tolerance. Science (1998) 5.85

AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Res (2004) 5.53

The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature (2011) 4.94

Cold calcium signaling in Arabidopsis involves two cellular pools and a change in calcium signature after acclimation. Plant Cell (1996) 4.34

OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression. Plant J (2003) 4.09

A protein kinase, interacting with two calcineurin B-like proteins, regulates K+ transporter AKT1 in Arabidopsis. Cell (2006) 3.58

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotechnol (2013) 3.41

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event. Proc Natl Acad Sci U S A (2009) 3.13

[GSDS: a gene structure display server]. Yi Chuan (2007) 3.02

Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors. EMBO J (1999) 2.96

SOS3 function in plant salt tolerance requires N-myristoylation and calcium binding. Plant Cell (2000) 2.91

Genes for calcineurin B-like proteins in Arabidopsis are differentially regulated by stress signals. Proc Natl Acad Sci U S A (1999) 2.42

Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development. Plant Physiol (2011) 2.36

Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators. Plant J (2000) 2.33

Low-temperature signal transduction: induction of cold acclimation-specific genes of alfalfa by calcium at 25 degrees C. Plant Cell (1995) 2.14

CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis. Plant Cell (2003) 2.10

Novel protein kinases associated with calcineurin B-like calcium sensors in Arabidopsis. Plant Cell (1999) 2.02

Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Plant Physiol (2004) 1.94

The calcium sensor calcineurin B-like 9 modulates abscisic acid sensitivity and biosynthesis in Arabidopsis. Plant Cell (2004) 1.93

Signal transmission in the plant immune response. Trends Plant Sci (2001) 1.91

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.). Plant J (2013) 1.87

Two calcineurin B-like calcium sensors, interacting with protein kinase CIPK23, regulate leaf transpiration and root potassium uptake in Arabidopsis. Plant J (2007) 1.82

Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence. Plant J (2003) 1.81

The calcium sensor CBL1 integrates plant responses to abiotic stresses. Plant J (2003) 1.48

Dual fatty acyl modification determines the localization and plasma membrane targeting of CBL/CIPK Ca2+ signaling complexes in Arabidopsis. Plant Cell (2008) 1.47

Identification of an ethylene-responsive region in the promoter of a fruit ripening gene. Proc Natl Acad Sci U S A (1993) 1.46

The calcium sensor CBL10 mediates salt tolerance by regulating ion homeostasis in Arabidopsis. Plant J (2007) 1.46

The CBL-CIPK Ca(2+)-decoding signaling network: function and perspectives. New Phytol (2009) 1.44

Cold-Induced Changes in Freezing Tolerance, Protein Phosphorylation, and Gene Expression (Evidence for a Role of Calcium). Plant Physiol (1993) 1.39

Alternative complex formation of the Ca-regulated protein kinase CIPK1 controls abscisic acid-dependent and independent stress responses in Arabidopsis. Plant J (2006) 1.36

CIPK6, a CBL-interacting protein kinase is required for development and salt tolerance in plants. Plant J (2009) 1.36

Transcriptome analysis of cold acclimation in barley albina and xantha mutants. Plant Physiol (2006) 1.31

Functional architecture of a late pollen promoter: pollen-specific transcription is developmentally regulated by multiple stage-specific and co-dependent activator elements. Plant Mol Biol (1998) 1.28

CBL-mediated targeting of CIPKs facilitates the decoding of calcium signals emanating from distinct cellular stores. Plant J (2009) 1.25

Calcium decoding mechanisms in plants. Biochimie (2011) 1.20

Calcium-dependent modulation and plasma membrane targeting of the AKT2 potassium channel by the CBL4/CIPK6 calcium sensor/protein kinase complex. Cell Res (2011) 1.19

The crystal structure of the novel calcium-binding protein AtCBL2 from Arabidopsis thaliana. J Biol Chem (2003) 1.18

Tonoplast calcium sensors CBL2 and CBL3 control plant growth and ion homeostasis through regulating V-ATPase activity in Arabidopsis. Cell Res (2012) 1.11

Long term transcript accumulation during the development of dehydration adaptation in Cicer arietinum. Plant Physiol (2004) 1.07

Arabidopsis CIPK26 interacts with KEG, components of the ABA signalling network and is degraded by the ubiquitin-proteasome system. J Exp Bot (2013) 1.01

The Brassica napus calcineurin B-Like 1/CBL-interacting protein kinase 6 (CBL1/CIPK6) component is involved in the plant response to abiotic stress and ABA signalling. J Exp Bot (2012) 0.97

Calcineurin B-like protein CBL10 directly interacts with AKT1 and modulates K+ homeostasis in Arabidopsis. Plant J (2013) 0.94

OsCIPK31, a CBL-interacting protein kinase is involved in germination and seedling growth under abiotic stress conditions in rice plants. Mol Cells (2010) 0.91

Potassium transport in developing fleshy fruits: the grapevine inward K(+) channel VvK1.2 is activated by CIPK-CBL complexes and induced in ripening berry flesh cells. Plant J (2013) 0.90

The calcium sensor PeCBL1, interacting with PeCIPK24/25 and PeCIPK26, regulates Na(+)/K (+) homeostasis in Populus euphratica. Plant Cell Rep (2013) 0.87

The vacuolar calcium sensors CBL2 and CBL3 affect seed size and embryonic development in Arabidopsis thaliana. Plant J (2014) 0.87

CIPK7 is involved in cold response by interacting with CBL1 in Arabidopsis thaliana. Plant Sci (2011) 0.87

Roles of calcineurin B-like protein-interacting protein kinases in innate immunity in rice. Plant Signal Behav (2010) 0.87

Mutation of GT-1 binding sites in the Pr-1A promoter influences the level of inducible gene expression in vivo. Plant Mol Biol (1999) 0.86

The calcineurin B-like Ca2+ sensors CBL1 and CBL9 function in pollen germination and pollen tube growth in Arabidopsis. Mol Plant (2013) 0.85

The tomato calcium sensor Cbl10 and its interacting protein kinase Cipk6 define a signaling pathway in plant immunity. Plant Cell (2013) 0.85

An ER-targeted calcium-binding peptide confers salt and drought tolerance mediated by CIPK6 in Arabidopsis. Planta (2011) 0.83

Overexpression of soybean GmCBL1 enhances abiotic stress tolerance and promotes hypocotyl elongation in Arabidopsis. Biochem Biophys Res Commun (2012) 0.82

A novel role for Arabidopsis CBL1 in affecting plant responses to glucose and gibberellin during germination and seedling development. PLoS One (2013) 0.79