Published in ISME J on August 18, 2015
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Differences in the Composition of Archaeal Communities in Sediments from Contrasting Zones of Lake Taihu. Front Microbiol (2016) 0.75
Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions. Sci Rep (2017) 0.75
Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats. Front Microbiol (2016) 0.75
The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions. Front Microbiol (2016) 0.75
Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments. Front Microbiol (2016) 0.75
Unusual Butane- and Pentanetriol-Based Tetraether Lipids in Methanomassiliicoccus luminyensis, a Representative of the Seventh Order of Methanogens. Appl Environ Microbiol (2016) 0.75
Unveiling microbial interactions in stratified mat communities from a warm saline shallow pond. Environ Microbiol (2017) 0.75
Occurrence and expression of novel methyl-coenzyme M reductase gene (mcrA) variants in hot spring sediments. Sci Rep (2017) 0.75
Abundance and Co-Distribution of Widespread Marine Archaeal Lineages in Surface Sediments of Freshwater Water Bodies across the Iberian Peninsula. Microb Ecol (2017) 0.75
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol (2009) 77.55
ARB: a software environment for sequence data. Nucleic Acids Res (2004) 58.27
A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol (2008) 38.22
UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics (2006) 25.13
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics (2006) 14.96
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Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature (2005) 9.83
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. ISME J (2009) 9.71
Insights into the phylogeny and coding potential of microbial dark matter. Nature (2013) 8.55
Global patterns in bacterial diversity. Proc Natl Acad Sci U S A (2007) 8.00
Exploring the Phylogenetic Structure of Ecological Communities: An Example for Rain Forest Trees. Am Nat (2000) 5.66
Anaerobic ammonium oxidation by anammox bacteria in the Black Sea. Nature (2003) 4.65
N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica. Nature (2003) 4.19
Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ Microbiol (2000) 3.99
Explaining the excess of rare species in natural species abundance distributions. Nature (2003) 3.97
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proc Natl Acad Sci U S A (2006) 3.46
Microbial interactions: from networks to models. Nat Rev Microbiol (2012) 3.28
Global distribution of microbial abundance and biomass in subseafloor sediment. Proc Natl Acad Sci U S A (2012) 2.96
A global network of coexisting microbes from environmental and whole-genome sequence data. Genome Res (2010) 2.85
Global ecological patterns in uncultured Archaea. ISME J (2009) 2.78
Using network analysis to explore co-occurrence patterns in soil microbial communities. ISME J (2011) 2.76
The phylogenetic structure of a neotropical forest tree community. Ecology (2006) 2.71
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. Proc Natl Acad Sci U S A (2008) 2.56
Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. ISME J (2010) 2.55
Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk. Appl Environ Microbiol (2003) 2.41
Predominant archaea in marine sediments degrade detrital proteins. Nature (2013) 2.41
Marine bacterial, archaeal and protistan association networks reveal ecological linkages. ISME J (2011) 2.40
Phylogenetic clustering and overdispersion in bacterial communities. Ecology (2006) 2.35
Phylogenetic measures of biodiversity. Am Nat (2007) 2.30
Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces. Int J Syst Evol Microbiol (2012) 2.19
Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon. ISME J (2012) 2.02
"Methanoplasmatales," Thermoplasmatales-related archaea in termite guts and other environments, are the seventh order of methanogens. Appl Environ Microbiol (2012) 1.88
A comparison of taxon co-occurrence patterns for macro- and microorganisms. Ecology (2007) 1.84
Infrequent marine-freshwater transitions in the microbial world. Trends Microbiol (2009) 1.79
The large-scale organization of the bacterial network of ecological co-occurrence interactions. Nucleic Acids Res (2010) 1.75
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. ISME J (2012) 1.51
Explaining abundance-occupancy relationships in specialists and generalists: a case study on aquatic macroinvertebrates in standing waters. J Anim Ecol (2010) 1.50
Prokaryotic biodiversity and activity in the deep subseafloor biosphere. FEMS Microbiol Ecol (2008) 1.49
Genomic expansion of domain archaea highlights roles for organisms from new phyla in anaerobic carbon cycling. Curr Biol (2015) 1.40
A 'rare biosphere' microorganism contributes to sulfate reduction in a peatland. ISME J (2010) 1.38
Deciphering microbial interactions and detecting keystone species with co-occurrence networks. Front Microbiol (2014) 1.33
Candidatus Methanogranum caenicola: a novel methanogen from the anaerobic digested sludge, and proposal of Methanomassiliicoccaceae fam. nov. and Methanomassiliicoccales ord. nov., for a methanogenic lineage of the class Thermoplasmata. Microbes Environ (2013) 1.31
High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study. FEMS Microbiol Ecol (2008) 1.23
Genetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses. ISME J (2013) 1.23
Molecular ecological network analyses. BMC Bioinformatics (2012) 1.19
Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine. BMC Genomics (2014) 1.18
Phylogenetic diversity of archaea and bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France). Appl Environ Microbiol (2007) 1.12
Infrequent transitions between saline and fresh waters in one of the most abundant microbial lineages (SAR11). Mol Biol Evol (2009) 1.05
Vertical segregation and phylogenetic characterization of ammonia-oxidizing Archaea in a deep oligotrophic lake. ISME J (2012) 1.03
An uncultivated crenarchaeota contains functional bacteriochlorophyll a synthase. ISME J (2008) 1.03
Positive relationships between association strength and phenotypic similarity characterize the assembly of mixed-species bird flocks worldwide. Am Nat (2012) 0.98
Prokaryotic functional diversity in different biogeochemical depth zones in tidal sediments of the Severn Estuary, UK, revealed by stable-isotope probing. FEMS Microbiol Ecol (2010) 0.98
Local conditions structure unique archaeal communities in the anoxic sediments of meromictic Lake Kivu. Microb Ecol (2012) 0.97
Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages. Front Microbiol (2012) 0.94
Stratification of Archaea in the deep sediments of a freshwater meromictic lake: vertical shift from methanogenic to uncultured archaeal lineages. PLoS One (2012) 0.93
Vertical distribution of ammonia-oxidizing crenarchaeota and methanogens in the epipelagic waters of Lake Kivu (Rwanda-Democratic Republic of the Congo). Appl Environ Microbiol (2010) 0.93
Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes. ISME J (2013) 0.85
Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA). Environ Microbiol (2015) 0.84
Crenarchaeal heterotrophy in salt marsh sediments. ISME J (2014) 0.83
Co-occurrence patterns along a regional aridity gradient of the subtropical Andes do not support stress gradient hypotheses. PLoS One (2013) 0.81
Linking isoprenoidal GDGT membrane lipid distributions with gene abundances of ammonia-oxidizing Thaumarchaeota and uncultured crenarchaeotal groups in the water column of a tropical lake (Lake Challa, East Africa). Environ Microbiol (2013) 0.81
Diversity of Miscellaneous Crenarchaeotic Group archaea in freshwater karstic lakes and their segregation between planktonic and sediment habitats. FEMS Microbiol Ecol (2015) 0.80
Phylogenetic characterization and quantification of ammonia-oxidizing archaea and bacteria from Lake Kivu in a long-term microcosm incubation. Int Microbiol (2013) 0.77
Analysis of metagenomic data reveals common features of halophilic viral communities across continents. Environ Microbiol (2015) 0.77