Published in Nat Commun on November 10, 2015
miR-374a-CCND1-pPI3K/AKT-c-JUN feedback loop modulated by PDCD4 suppresses cell growth, metastasis, and sensitizes nasopharyngeal carcinoma to cisplatin. Oncogene (2016) 0.79
Micro RNA-17-92 cluster mediates interleukin-4-suppressed IL-10 expression in B cells. Am J Transl Res (2016) 0.79
MicroRNA-based screens for synthetic lethal interactions with c-Myc. RNA Dis (2016) 0.78
CDK4 and miR-15a comprise an abnormal automodulatory feedback loop stimulating the pathogenesis and inducing chemotherapy resistance in nasopharyngeal carcinoma. BMC Cancer (2016) 0.75
MS-analysis of SILAC-labeled MYC-driven B lymphoma cells overexpressing miR-17-19b. Data Brief (2016) 0.75
Spatiotemporal plasticity of miRNAs functions: The miR-17-92 case. Mol Cell Oncol (2016) 0.75
MicroRNA inhibition fine-tunes and provides robustness to the restriction point switch of the cell cycle. Sci Rep (2016) 0.75
MYC/miR-17-92 interplay maintains B-lymphoma cell homeostasis. Cell Cycle (2016) 0.75
miR-19a promotes colitis-associated colorectal cancer by regulating tumor necrosis factor alpha-induced protein 3-NF-κB feedback loops. Oncogene (2016) 0.75
miR18a and miR19a Recruit Specific Proteins for Splicing in Thyroid Cancer Cells. Cancer Genomics Proteomics (2017) 0.75
miR-28 regulates the germinal center reaction and blocks tumor growth in preclinical models of non-Hodgkin lymphoma. Blood (2017) 0.75
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol (2009) 235.12
Bioconductor: open software development for computational biology and bioinformatics. Genome Biol (2004) 143.19
Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics (2003) 100.88
MicroRNA expression profiles classify human cancers. Nature (2005) 69.12
A microRNA polycistron as a potential human oncogene. Nature (2005) 40.21
MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell (2007) 38.42
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol (2008) 38.00
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol (2013) 32.42
c-Myc-regulated microRNAs modulate E2F1 expression. Nature (2005) 31.81
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics (2002) 30.58
Andromeda: a peptide search engine integrated into the MaxQuant environment. J Proteome Res (2011) 14.82
Ensembl 2011. Nucleic Acids Res (2010) 14.68
NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy. Nucleic Acids Res (2011) 14.04
ProteomeXchange provides globally coordinated proteomics data submission and dissemination. Nat Biotechnol (2014) 13.40
Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites. Science (2008) 11.33
Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips. Nat Protoc (2007) 10.71
Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells. Cell (2009) 10.50
Biological robustness. Nat Rev Genet (2004) 9.98
miRiad roles for the miR-17-92 cluster in development and disease. Cell (2008) 8.02
Myc's broad reach. Genes Dev (2008) 7.56
High gradient magnetic cell separation with MACS. Cytometry (1990) 6.69
Roles for microRNAs in conferring robustness to biological processes. Cell (2012) 6.32
The c-Myc target gene network. Semin Cancer Biol (2006) 5.98
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. Nucleic Acids Res (2011) 5.60
miR-19 is a key oncogenic component of mir-17-92. Genes Dev (2009) 4.95
miRNA-mediated gene silencing by translational repression followed by mRNA deadenylation and decay. Science (2012) 4.44
Genetic dissection of the miR-17~92 cluster of microRNAs in Myc-induced B-cell lymphomas. Genes Dev (2009) 4.43
HuR recruits let-7/RISC to repress c-Myc expression. Genes Dev (2009) 4.41
BioMart: driving a paradigm change in biological data management. Database (Oxford) (2011) 4.32
Mir-17-5p regulates breast cancer cell proliferation by inhibiting translation of AIB1 mRNA. Mol Cell Biol (2006) 3.71
Estimation and assessment of raw copy numbers at the single locus level. Bioinformatics (2008) 3.62
The UCSC genome browser and associated tools. Brief Bioinform (2012) 3.29
mir-17-92, a cluster of miRNAs in the midst of the cancer network. Int J Biochem Cell Biol (2010) 3.15
A cyclin D1/microRNA 17/20 regulatory feedback loop in control of breast cancer cell proliferation. J Cell Biol (2008) 3.02
A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6. Bioinformatics (2009) 2.90
Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis. Proteomics (2008) 2.76
Posttranscriptional regulation of cancer traits by HuR. Wiley Interdiscip Rev RNA (2010) 2.59
Alternative cleavage and polyadenylation: extent, regulation and function. Nat Rev Genet (2013) 2.37
MicroRNA regulation of a cancer network: consequences of the feedback loops involving miR-17-92, E2F, and Myc. Proc Natl Acad Sci U S A (2008) 2.24
The MK5/PRAK kinase and Myc form a negative feedback loop that is disrupted during colorectal tumorigenesis. Mol Cell (2011) 2.17
Alternative cleavage and polyadenylation: the long and short of it. Trends Biochem Sci (2013) 2.01
Burkitt lymphoma in the mouse. J Exp Med (2000) 1.96
Translational repression and eIF4A2 activity are critical for microRNA-mediated gene regulation. Science (2013) 1.94
Proteomic profiling of Myc-associated proteins. Cell Cycle (2010) 1.80
miR-17 family of microRNAs controls FGF10-mediated embryonic lung epithelial branching morphogenesis through MAPK14 and STAT3 regulation of E-Cadherin distribution. Dev Biol (2009) 1.56
c-myc Internal ribosome entry site activity is developmentally controlled and subjected to a strong translational repression in adult transgenic mice. Mol Cell Biol (2001) 1.53
"Myc'ed messages": myc induces transcription of E2F1 while inhibiting its translation via a microRNA polycistron. PLoS Genet (2007) 1.45
Identification of internal ribosome entry segment (IRES)-trans-acting factors for the Myc family of IRESs. Mol Cell Biol (2007) 1.44
Polyamines regulate c-Myc translation through Chk2-dependent HuR phosphorylation. Mol Biol Cell (2009) 1.38
The proto-oncogene LRF is under post-transcriptional control of MiR-20a: implications for senescence. PLoS One (2008) 1.37
miR-17-92 cluster: ups and downs in cancer and aging. Biogerontology (2010) 1.32
Developmental expression of AUF1 and HuR, two c-myc mRNA binding proteins. Oncogene (1998) 1.32
Multiple functions of the RNA-binding protein HuR in cancer progression, treatment responses and prognosis. Int J Mol Sci (2013) 1.28
Deep sequencing of MYC DNA-binding sites in Burkitt lymphoma. PLoS One (2011) 1.22
A component of the mir-17-92 polycistronic oncomir promotes oncogene-dependent apoptosis. Elife (2013) 1.20
miR-18a impairs DNA damage response through downregulation of ataxia telangiectasia mutated (ATM) kinase. PLoS One (2011) 1.20
MicroRNA-17/20a functions to inhibit cell migration and can be used a prognostic marker in oral squamous cell carcinoma. Oral Oncol (2013) 1.11
Cellular inhibition of checkpoint kinase 2 (Chk2) and potentiation of camptothecins and radiation by the novel Chk2 inhibitor PV1019 [7-nitro-1H-indole-2-carboxylic acid {4-[1-(guanidinohydrazone)-ethyl]-phenyl}-amide]. J Pharmacol Exp Ther (2009) 1.11
miR-17~92 miRNA cluster promotes kidney cyst growth in polycystic kidney disease. Proc Natl Acad Sci U S A (2013) 1.10
Properties of the regulatory RNA-binding protein HuR and its role in controlling miRNA repression. Adv Exp Med Biol (2010) 1.05
Combinatorial effects of microRNAs to suppress the Myc oncogenic pathway. Blood (2011) 1.02
Caspase-mediated cleavage of RNA-binding protein HuR regulates c-Myc protein expression after hypoxic stress. J Biol Chem (2011) 1.00
A curated database of miRNA mediated feed-forward loops involving MYC as master regulator. PLoS One (2011) 0.97
Regulation of the mRNA-binding protein HuR by posttranslational modification: spotlight on phosphorylation. Curr Protein Pept Sci (2012) 0.95
Widespread generation of alternative UTRs contributes to sex-specific RNA binding by UNR. RNA (2011) 0.91
Thyroid hormone receptor represses miR-17 expression to enhance tumor metastasis in human hepatoma cells. Oncogene (2013) 0.90
Upregulation of the cell-cycle regulator RGC-32 in Epstein-Barr virus-immortalized cells. PLoS One (2011) 0.85
Posttranscriptional regulation of gene expression in epithelial cells by polyamines. Methods Mol Biol (2011) 0.79
Pathology Tissue-quantitative Mass Spectrometry Analysis to Profile Histone Post-translational Modification Patterns in Patient Samples. Mol Cell Proteomics (2015) 0.95
Chromatin proteomics reveals novel combinatorial histone modification signatures that mark distinct subpopulations of macrophage enhancers. Nucleic Acids Res (2017) 0.75