Published in Stand Genomic Sci on November 03, 2016
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet (2000) 336.52
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97
The RAST Server: rapid annotations using subsystems technology. BMC Genomics (2008) 175.18
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res (1997) 142.55
Accurate whole human genome sequencing using reversible terminator chemistry. Nature (2008) 90.20
RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res (2007) 85.81
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci U S A (1990) 50.63
The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol (2008) 31.04
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res (2005) 29.61
Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol (2011) 13.24
Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence. Int J Syst Evol Microbiol (2000) 4.31
Escherichia coli mechanisms of copper homeostasis in a changing environment. FEMS Microbiol Rev (2003) 3.30
Regulation of antibiotic production in root-colonizing Peudomonas spp. and relevance for biological control of plant disease. Annu Rev Phytopathol (2003) 2.44
Antibiotic production by bacterial biocontrol agents. Antonie Van Leeuwenhoek (2002) 2.24
Molecular mechanisms of fluoroquinolone resistance in Pseudomonas aeruginosa isolates from cystic fibrosis patients. Antimicrob Agents Chemother (2000) 2.07
IslandViewer update: Improved genomic island discovery and visualization. Nucleic Acids Res (2013) 1.76
Validation of publication of new names and new combinations previously effectively published outside the IJSEM. Int J Syst Evol Microbiol (2005) 1.65
Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environ Microbiol (2003) 1.61
Taxonomic study of bacteria isolated from natural mineral waters: proposal of Pseudomonas jessenii sp. nov. and Pseudomonas mandelii sp. nov. Syst Appl Microbiol (1999) 1.32
Biochemical characterization of CopA, the Escherichia coli Cu(I)-translocating P-type ATPase. J Biol Chem (2002) 1.31
Iron, copper, zinc, and manganese transport and regulation in pathogenic Enterobacteria: correlations between strains, site of infection and the relative importance of the different metal transport systems for virulence. Front Cell Infect Microbiol (2013) 1.19
Distinct functional roles of homologous Cu+ efflux ATPases in Pseudomonas aeruginosa. Mol Microbiol (2010) 1.19
Cu exposure under field conditions coselects for antibiotic resistance as determined by a novel cultivation-independent bacterial community tolerance assay. Environ Sci Technol (2010) 1.12
Parallel evolution and local differentiation in quinolone resistance in Pseudomonas aeruginosa. Microbiology (2011) 1.09
Pathogenic adaptations to host-derived antibacterial copper. Front Cell Infect Microbiol (2014) 0.98
Mechanisms of copper homeostasis in bacteria. Front Cell Infect Microbiol (2013) 0.98
Genome sequence of the polyhydroxybutyrate producer Pseudomonas extremaustralis, a highly stress-resistant Antarctic bacterium. J Bacteriol (2012) 0.98
Genome sequence and comparative pathogenomics analysis of a Salmonella enterica Serovar Typhi strain associated with a typhoid carrier in Malaysia. J Bacteriol (2012) 0.96
Regulation of copper homeostasis in Pseudomonas fluorescens SBW25. Environ Microbiol (2008) 0.96
Copper transport and trafficking at the host-bacterial pathogen interface. Acc Chem Res (2014) 0.93
Novel transporter required for biogenesis of cbb3-type cytochrome c oxidase in Rhodobacter capsulatus. MBio (2012) 0.92
Draft genome sequence of Pseudomonas sp. strain Ag1, isolated from the midgut of the malaria mosquito Anopheles gambiae. J Bacteriol (2012) 0.90
Molecular basis of active copper resistance mechanisms in Gram-negative bacteria. Cell Biol Toxicol (2013) 0.89
Effect of a copper gradient on plant community structure. Environ Toxicol Chem (2006) 0.88
Decreased abundance and diversity of culturable Pseudomonas spp. populations with increasing copper exposure in the sugar beet rhizosphere. FEMS Microbiol Ecol (2006) 0.87
Identification of the transcriptional regulator NcrB in the nickel resistance determinant of Leptospirillum ferriphilum UBK03. PLoS One (2011) 0.85
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440. Environ Microbiol Rep (2014) 0.84
Characterization of a marine-isolated mercury-resistant Pseudomonas putida strain SP1 and its potential application in marine mercury reduction. Appl Microbiol Biotechnol (2011) 0.82
Heavy metal resistance strategies of acidophilic bacteria and their acquisition: importance for biomining and bioremediation. Biol Res (2013) 0.80
The rulB gene of plasmid pWW0 is a hotspot for the site-specific insertion of integron-like elements found in the chromosomes of environmental Pseudomonas fluorescens group bacteria. Environ Microbiol (2014) 0.78