Published in PLoS One on May 03, 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
The Sequence Alignment/Map format and SAMtools. Bioinformatics (2009) 232.39
Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics (2010) 52.01
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics (2008) 29.20
MEGAN analysis of metagenomic data. Genome Res (2007) 25.29
Enterotypes of the human gut microbiome. Nature (2011) 24.36
Integrative analysis of environmental sequences using MEGAN4. Genome Res (2011) 8.60
Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science (2010) 6.73
Kraken: ultrafast metagenomic sequence classification using exact alignments. Genome Biol (2014) 5.40
Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw. Nature (2011) 3.80
RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data. Bioinformatics (2011) 3.50
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes. Nat Biotechnol (2014) 2.85
Taxonomic classification of metagenomic shotgun sequences with CARMA3. Nucleic Acids Res (2011) 1.81
Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. ISME J (2014) 1.60
Benchmarking of methods for genomic taxonomy. J Clin Microbiol (2014) 1.51
Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities. BMC Bioinformatics (2015) 1.09
Bacterial diversity in snow on North Pole ice floes. Extremophiles (2014) 0.84
Genome Sequence of Talaromyces atroroseus, Which Produces Red Colorants for the Food Industry. Genome Announc (2017) 0.75
Protein features as determinants of wild-type glycoside hydrolase thermostability. Proteins (2017) 0.75