Slow transitions and hysteretic behavior in enzymes.

PubWeight™: 2.02‹?› | Rank: Top 2%

🔗 View Article (PMID 382990)

Published in Annu Rev Biochem on January 01, 1979

Authors

C Frieden

Articles citing this

Multiple native states reveal persistent ruggedness of an RNA folding landscape. Nature (2010) 1.69

Von Willebrand factor-binding protein is a hysteretic conformational activator of prothrombin. Proc Natl Acad Sci U S A (2009) 1.28

Motor step size and ATP coupling efficiency of the dsDNA translocase EcoR124I. EMBO J (2008) 1.28

The kinetics of substrate-induced inactivation. Biochem J (1991) 1.09

Lactate dehydrogenase undergoes a substantial structural change to bind its substrate. Biophys J (2007) 1.07

Purification and properties of a stable beta-glucosidase from an extremely thermophilic anaerobic bacterium. Biochem J (1987) 1.06

The single polypeptide restriction-modification enzyme LlaGI is a self-contained molecular motor that translocates DNA loops. Nucleic Acids Res (2009) 1.02

Autolysis parallels activation of mu-calpain. Biochem J (1996) 1.01

A structural and energetic model for the slow-onset inhibition of the Mycobacterium tuberculosis enoyl-ACP reductase InhA. ACS Chem Biol (2014) 1.00

Hidden complexity in the isomerization dynamics of Holliday junctions. Nat Chem (2012) 0.99

Involvement of hysteretic effects in the inhibition of carnitine palmitoyltransferase by malonyl-CoA. Biochem J (1984) 0.98

Cooperativity in monomeric enzymes with single ligand-binding sites. Bioorg Chem (2011) 0.95

Cooperativity and specificity in enzyme kinetics: a single-molecule time-based perspective. Biophys J (2008) 0.94

The Goldbeter-Koshland switch in the first-order region and its response to dynamic disorder. PLoS One (2008) 0.90

Excess-substrate inhibition in enzymology and high-dose inhibition in pharmacology: a reinterpretation [corrected]. Biochem J (1994) 0.89

Intertissue differences in the hysteretic behaviour of carnitine palmitoyltransferase in the presence of malonyl-CoA. Biochem J (1986) 0.89

Robust optimal design of experiments for model discrimination using an interactive software tool. PLoS One (2013) 0.87

Hysteresis of plant cell-wall beta-glucosidase. Biochem J (1990) 0.87

Thioredoxin glutathione reductase: its role in redox biology and potential as a target for drugs against neglected diseases. Biochim Biophys Acta (2011) 0.87

Invariance and optimality in the regulation of an enzyme. Biol Direct (2013) 0.85

Role of Mg2+ in the structure and activity of maize (Zea mays L.) isocitrate lyase: indications for hysteretic behaviour. Biochem J (1997) 0.85

Evidence for hysteretic substrate channeling in the proline dehydrogenase and Δ1-pyrroline-5-carboxylate dehydrogenase coupled reaction of proline utilization A (PutA). J Biol Chem (2013) 0.84

The slow kinetic transients of arylsulphatase A. Biochem J (1982) 0.84

Activation of PDE2 and PDE5 by specific GAF ligands: delayed activation of PDE5. Br J Pharmacol (2010) 0.84

Unstable reaction intermediates and hysteresis during the catalytic cycle of 5-aminolevulinate synthase: implications from using pseudo and alternate substrates and a promiscuous enzyme variant. J Biol Chem (2014) 0.83

pH-induced bistable dynamic behaviour in the reaction catalysed by glucose-6-phosphate dehydrogenase and conformational hysteresis of the enzyme. Biochem J (1989) 0.82

Stochastic ensembles, conformationally adaptive teamwork, and enzymatic detoxification. Biochemistry (2011) 0.81

Post-tetanic hyperpolarization evoked by depolarizing pulses in crayfish stretch receptor neurones in tetrodotoxin. J Physiol (1984) 0.81

Dual allosteric activation mechanisms in monomeric human glucokinase. Proc Natl Acad Sci U S A (2015) 0.81

Thermal stability of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea. Biochim Biophys Acta (2012) 0.81

Enzymatic detoxication, conformational selection, and the role of molten globule active sites. J Biol Chem (2013) 0.81

Metabolism of trans-Aconitic Acid in Maize : II. Regulatory Properties of Two Compartmented Forms of Citrate Dehydrase. Plant Physiol (1982) 0.81

Molecular basis of vancomycin dependence in VanA-type Staphylococcus aureus VRSA-9. J Bacteriol (2010) 0.80

Functional roles of slow enzyme conformational changes in network dynamics. Biophys J (2012) 0.80

A functionally inactive, cold-stabilized form of the Escherichia coli F1Fo ATP synthase. Biochim Biophys Acta (2006) 0.80

pH-dependent hysteretic behaviour of human myeloblastin (leucocyte proteinase 3). Biochem J (1996) 0.79

Analysis of the co-operative interaction between the allosterically regulated proteins GK and GKRP using tryptophan fluorescence. Biochem J (2014) 0.79

Some uses of extrapolation in kinetics. Biochem J (1989) 0.79

Differentiation of the slow-binding mechanism for magnesium ion activation and zinc ion inhibition of human placental alkaline phosphatase. Protein Sci (2001) 0.79

Effect of zymogen domains and active site occupation on activation of prothrombin by von Willebrand factor-binding protein. J Biol Chem (2012) 0.77

The uncoupled ATPase activity of the ABC transporter BtuC2D2 leads to a hysteretic conformational change, conformational memory, and improved activity. Sci Rep (2016) 0.77

Kinetic pathways of formation and dissociation of the glycerol-3-phosphate dehydrogenase-fructose-1,6-bisphosphate aldolase complex. Biochem J (1985) 0.77

Hysteretic behavior of proprotein convertase 1/3 (PC1/3). PLoS One (2011) 0.76

Acyl-ACP substrate recognition in Burkholderia mallei BmaI1 acyl-homoserine lactone synthase. Biochemistry (2014) 0.76

Directly measuring single-molecule heterogeneity using force spectroscopy. Proc Natl Acad Sci U S A (2016) 0.76

A kinetic study of rat recombinant DNA polymerase beta: detection of a slow (hysteretic) transition in polymerase activity and inhibition by butylphenyl-deoxyguanosine triphosphate. Nucleic Acids Res (1989) 0.75

The average enzyme principle. FEBS Lett (2013) 0.75

Articles by these authors

(truncated to the top 100)

Kinetic aspects of regulation of metabolic processes. The hysteretic enzyme concept. J Biol Chem (1970) 4.61

Analysis of numerical methods for computer simulation of kinetic processes: development of KINSIM--a flexible, portable system. Anal Biochem (1983) 4.09

Actin polymerization. The mechanism of action of cytochalasin D. J Biol Chem (1986) 2.93

Microinjection of gelsolin into living cells. J Cell Biol (1987) 2.06

Actin and tubulin polymerization: the use of kinetic methods to determine mechanism. Annu Rev Biophys Biophys Chem (1985) 2.04

PapD-like chaperones provide the missing information for folding of pilin proteins. Proc Natl Acad Sci U S A (2000) 1.98

The structure of nonvertebrate actin: implications for the ATP hydrolytic mechanism. Proc Natl Acad Sci U S A (2003) 1.92

Analysis of progress curves by simulations generated by numerical integration. Biochem J (1989) 1.87

Polymerization of actin: mechanism of the Mg2+-induced process at pH 8 and 20 degrees C. Proc Natl Acad Sci U S A (1983) 1.85

Protein-protein interaction and enzymatic activity. Annu Rev Biochem (1971) 1.84

Polymerization of actin and actin-like systems: evaluation of the time course of polymerization in relation to the mechanism. Biochemistry (1983) 1.82

Climate change and the integrity of science. Science (2010) 1.80

Cytochalasin D and platelet gelsolin accelerate actin polymer formation. A model for regulation of the extent of actin polymer formation in vivo. Biochemistry (1982) 1.79

Dynamic NMR spectral analysis and protein folding: identification of a highly populated folding intermediate of rat intestinal fatty acid-binding protein by 19F NMR. Proc Natl Acad Sci U S A (1992) 1.55

On the role of amino groups in the structure and function of glutamate dehydrogenase. I. Effect of acetylation on catalytic and regulatory properties. J Biol Chem (1966) 1.47

Kinetic studies on the effect of yeast cofilin on yeast actin polymerization. Biochemistry (1998) 1.46

Treatment of enzyme kinetic data. II. The multisite case: comparison of allosteric models and a possible new mechanism. J Biol Chem (1967) 1.45

Polymerization and gelation of actin studied by fluorescence photobleaching recovery. Biochemistry (1982) 1.44

Actin polymerization induces a shape change in actin-containing vesicles. Proc Natl Acad Sci U S A (1989) 1.42

On the role of amino groups in the structure and function of glutamate dehydrogenase. II. Effect of acetylation on molecular properties. J Biol Chem (1966) 1.41

Folding of a predominantly beta-structure protein: rat intestinal fatty acid binding protein. Biochemistry (1990) 1.37

Interaction of AMP-aminohydrolase with myosin and its subfragments. J Biol Chem (1977) 1.34

Microheterogeneity of actin gels formed under controlled linear shear. J Cell Biol (1988) 1.33

A fluorescent probe for conformational changes in skeletal muscle G-actin. J Biol Chem (1980) 1.32

Kinetic studies on pig heart cytoplasmic malate dehydrogenase. J Biol Chem (1975) 1.32

Intestinal fatty acid binding protein: the folding mechanism as determined by NMR studies. Biochemistry (2001) 1.28

Actin polymerization. The effect of brevin on filament size and rate of polymerization. J Biol Chem (1984) 1.27

Fatty acid interactions with a helix-less variant of intestinal fatty acid-binding protein. Biochemistry (1996) 1.24

Yeast actin: polymerization kinetic studies of wild type and a poorly polymerizing mutant. Proc Natl Acad Sci U S A (1996) 1.24

Kinetic analysis of the mechanism of Escherichia coli dihydrofolate reductase. J Biol Chem (1987) 1.24

The Mg2+-induced conformational change in rabbit skeletal muscle G-actin. J Biol Chem (1982) 1.20

Stopped-flow NMR spectroscopy: real-time unfolding studies of 6-19F-tryptophan-labeled Escherichia coli dihydrofolate reductase. Proc Natl Acad Sci U S A (1995) 1.14

Polymerization-induced changes in the fluorescence of actin labeled with iodoacetamidotetramethylrhodamine. Arch Biochem Biophys (1982) 1.14

Divalent cation binding to the high- and low-affinity sites on G-actin. Biochemistry (1987) 1.13

New PC versions of the kinetic-simulation and fitting programs, KINSIM and FITSIM. Trends Biochem Sci (1997) 1.13

Effect of pH on the mechanism of actin polymerization. Biochemistry (1988) 1.12

Differences in G-actin containing bound ATP or ADP: the Mg2+-induced conformational change requires ATP. Biochemistry (1985) 1.11

Formation of actin dimers as studied by small angle neutron scattering. J Biol Chem (1986) 1.10

Identification of the sites of modification of bovine liver glutamate dehydrogenase reacted with trinitrobenzenesulfonate. Biochemistry (1971) 1.10

Intestinal fatty acid-binding protein: the structure and stability of a helix-less variant. Biochemistry (1996) 1.08

Treatment of enzyme kinetic data. 3. The use of the full time course of a reaction, as examined by computer simulation, in defining enzyme mechanisms. J Biol Chem (1973) 1.08

The binding of cytochalasin D to monomeric actin. Biochem Biophys Res Commun (1985) 1.07

Glutamate dehydrogenase concentration as a determinant in the effect of purine nucleotides on enzymatic activity. J Biol Chem (1967) 1.07

Adenosine deaminase and adenylate deaminase: comparative kinetic studies with transition state and ground state analogue inhibitors. Biochemistry (1980) 1.07

Myoadenylate deaminase deficiency. Muscle Nerve (1980) 1.06

Turn scanning by site-directed mutagenesis: application to the protein folding problem using the intestinal fatty acid binding protein. Protein Sci (1998) 1.06

The effect of pyridoxal phosphate modification on the catalytic and regulatory properties of bovine liver glutamate dehydrogenase. J Biol Chem (1972) 1.06

The kinetics of cytochalasin D binding to monomeric actin. J Biol Chem (1986) 1.05

Localization and mobility of gelsolin in cells. J Cell Biol (1988) 1.03

Rabbit muscle phosphofructokinase: the effect of the state of the enzyme and assay procedure on the kinetic properties. Arch Biochem Biophys (1975) 1.03

Studies on the structure of actin gels using time correlation spectroscopy of fluorescent beads. Biophys J (1992) 1.02

Rabbit muscle phosphofructokinase: studies on the polymerization. The behavior of the enzyme at pH 8, pH 6, and intermediate pH values. J Biol Chem (1972) 1.01

Full time course studies on the oxidation of reduced coenzyme by bovine liver glutamate dehydrogenase. Use of computer simulation to obtain rate and dissociation constants. J Biol Chem (1973) 1.00

Construction of a fol mutant strain of Escherichia coli for use in dihydrofolate reductase mutagenesis experiments. J Bacteriol (1988) 1.00

Determination of regions in the dihydrofolate reductase structure that interact with the molecular chaperonin GroEL. Biochemistry (1996) 0.99

Interaction of microtubule-associated proteins with actin filaments. Studies using the fluorescence-photobleaching recovery technique. J Biol Chem (1984) 0.98

Adenosine deaminase: viscosity studies and the mechanism of binding of substrate and of ground- and transition-state analogue inhibitors. Biochemistry (1987) 0.98

Intestinal fatty acid binding protein: a specific residue in one turn appears to stabilize the native structure and be responsible for slow refolding. Protein Sci (1997) 0.98

The helical domain of intestinal fatty acid binding protein is critical for collisional transfer of fatty acids to phospholipid membranes. Proc Natl Acad Sci U S A (1998) 0.98

Intestinal fatty acid binding protein: characterization of mutant proteins containing inserted cysteine residues. Biochemistry (1993) 0.98

19F NMR spectroscopy of [6-19F]tryptophan-labeled Escherichia coli dihydrofolate reductase: equilibrium folding and ligand binding studies. Biochemistry (1994) 0.97

The purification and physical properties of glutamate dehydrogenase from rat liver. J Biol Chem (1970) 0.96

Immunofluorescent and histochemical localization of AMP deaminase in skeletal muscle. J Cell Biol (1979) 0.95

Rabbit muscle phosphofructokinase: studies of the subunit molecular weight and structure. Isolation of carboxymethylated cysteinyl peptides and sedimentation equilibrium studies. J Biol Chem (1973) 0.95

The chaperonin GroEL binds to late-folding non-native conformations present in native Escherichia coli and murine dihydrofolate reductases. J Mol Biol (1999) 0.93

Rabbit muscle phosphofructokinase. Modification of molecular and regulatory kinetic properties with the affinity label 5'-p-(fluorosulfonyl)benzoyl adenosine. J Biol Chem (1978) 0.93

Adenylate deaminase. Kinetic and binding studies on the rabbit muscle enzyme. J Biol Chem (1978) 0.93

A small computer system for the routine analysis of enzyme kinetic mechanisms. Comput Biomed Res (1973) 0.93

Malate dehydrogenases. The lack of evidence for dissociation of the dimeric enzyme in kinetic analyses. J Biol Chem (1978) 0.91

Protein fragments as probes in the study of protein folding mechanisms: differential effects of dihydrofolate reductase fragments on the refolding of the intact protein. Proc Natl Acad Sci U S A (1989) 0.91

Phosphofructokinase. II. Role of ligands in pH-dependent structural changes of the rabbit muscle enzyme. J Biol Chem (1976) 0.91

Real-time refolding studies of 6-19F-tryptophan labeled Escherichia coli dihydrofolate reductase using stopped-flow NMR spectroscopy. Biochemistry (1996) 0.90

Binding of regulatory ligands to rabbit muscle phosphofructokinase. A model for nucleotide binding as a function of temperature and pH. J Biol Chem (1979) 0.90

GroEL-mediated folding of structurally homologous dihydrofolate reductases. J Mol Biol (1997) 0.89

Phosphofructokinase. III. Correlation of the regulatory kinetic and molecular properties of the rabbit muscle enzyme. J Biol Chem (1976) 0.89

Effect of filamin and controlled linear shear on the microheterogeneity of F-actin/gelsolin gels. Cell Motil Cytoskeleton (1990) 0.89

Native Escherichia coli and murine dihydrofolate reductases contain late-folding non-native structures. J Mol Biol (1999) 0.89

Rabbit muscle phosphofructokinase. A model for regulatory kinetic behavior. J Biol Chem (1979) 0.88

Purification of GroEL with low fluorescence background. Methods Enzymol (1998) 0.87

Effect of trinitrophenylation of specific lysyl residues on the catalytic, regulatory, and molecular properties of bovine liver glutamate dehydrogenase. Biochemistry (1971) 0.87

Effect of temperature on the mechanism of actin polymerization. Biochemistry (1986) 0.87

The three-dimensional structure of a helix-less variant of intestinal fatty acid-binding protein. Protein Sci (1998) 0.86

Analysis of the cold lability behavior of rabbit muscle phosphofructokinase. Biochem Biophys Res Commun (1975) 0.85

Refolding of [6-19F]tryptophan-labeled Escherichia coli dihydrofolate reductase in the presence of ligand: a stopped-flow NMR spectroscopy study. Biochemistry (1998) 0.85

An NADH-induced conformational change that mediates the sequential 3 beta-hydroxysteroid dehydrogenase/isomerase activities is supported by affinity labeling and the time-dependent activation of isomerase. J Biol Chem (1995) 0.85

Phosphofructokinase. I. Mechanism of the pH-dependent inactivation and reactivation of the rabbit muscle enzyme. J Biol Chem (1976) 0.85

Catalytic strategy of citrate synthase: subunit interactions revealed as a consequence of a single amino acid change in the oxaloacetate binding site. Biochemistry (1995) 0.83

The rate of formation of transition-state analogues in the active site of adenosine deaminase is encounter-controlled: implications for the mechanism. Biochemistry (1992) 0.83

Crystallographic studies of glutamate dehydrogenase. Preliminary crystal data. J Biol Chem (1979) 0.83

Crystallographic studies of glutamate dehydrogenase. II. Preliminary crystal data for the tuna liver enzyme. J Mol Biol (1980) 0.83

Adenylate deaminase: potent inhibition by 2'-deoxycoformycin 5'-phosphate. Biochem Biophys Res Commun (1979) 0.83

pH-induced changes in G-actin conformation and metal affinity. Biochemistry (1988) 0.82

Effects of point mutations in a hinge region on the stability, folding, and enzymatic activity of Escherichia coli dihydrofolate reductase. Biochemistry (1991) 0.82

pH-induced cold lability of rabbit skeletal muscle phosphofructokinase. Biochemistry (1974) 0.82

Chemical modification of actin. Acceleration of polymerization and reduction of network formation by reaction with N-ethylmaleimide, (iodoacetamido)tetramethylrhodamine, or 7-chloro-4-nitro-2,1,3-benzoxadiazole. Biochemistry (1982) 0.81

Substrate-induced hysteresis in the activity of Escherichia coli dihydrofolate reductase. J Biol Chem (1985) 0.81

Adenosine deaminase converts purine riboside into an analogue of a reactive intermediate: a 13C NMR and kinetic study. Biochemistry (1987) 0.81

The tyrosine B10 hydroxyl is crucial for oxygen avidity of Ascaris hemoglobin. J Biol Chem (1994) 0.81

Cooperative interaction between the GTP binding sites of glutamate dehydrogenase. Biochem Biophys Res Commun (1966) 0.80

Protein structural changes accompanying formation of enzymatic transition states: tryptophan environment in ground-state and transition-state analogue complexes of adenosine deaminase. Biochemistry (1985) 0.80