Chromosome landing: a paradigm for map-based gene cloning in plants with large genomes.

PubWeight™: 2.27‹?› | Rank: Top 2%

🔗 View Article (PMID 7716809)

Published in Trends Genet on February 01, 1995

Authors

S D Tanksley1, M W Ganal, G B Martin

Author Affiliations

1: Department of Plant Breeding and Biometry, Cornell University, Ithaca, NY 14853.

Articles citing this

Diversity Arrays Technology (DArT) for whole-genome profiling of barley. Proc Natl Acad Sci U S A (2004) 4.70

Comparative DNA sequence analysis of wheat and rice genomes. Genome Res (2003) 3.63

A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits. BMC Genomics (2006) 3.18

Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics (2000) 3.05

Construction of a 10,000-marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genomewide physical map. Genetics (2006) 2.89

Mapping QTLs regulating morpho-physiological traits and yield: case studies, shortcomings and perspectives in drought-stressed maize. Ann Bot (2002) 2.71

Stable transfer of intact high molecular weight DNA into plant chromosomes. Proc Natl Acad Sci U S A (1996) 2.35

Map-based cloning of chloronerva, a gene involved in iron uptake of higher plants encoding nicotianamine synthase. Proc Natl Acad Sci U S A (1999) 1.70

Resistance of cultivated tomato to cell content-feeding herbivores is regulated by the octadecanoid-signaling pathway. Plant Physiol (2002) 1.69

Interval-specific congenic strains (ISCS): an experimental design for mapping a QTL into a 1-centimorgan interval. Mamm Genome (1997) 1.59

Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids. Genetics (1995) 1.57

Toward a marker-dense meiotic map of the potato genome: lessons from linkage group I. Genetics (2003) 1.50

Dense genetic linkage maps of three Populus species (Populus deltoides, P. nigra and P. trichocarpa) based on AFLP and microsatellite markers. Genetics (2001) 1.49

Physical mapping and microsynteny of Brassica rapa ssp. pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5. Mol Genet Genomics (2005) 1.48

High-density linkage mapping revealed suppression of recombination at the sex determination locus in papaya. Genetics (2004) 1.31

Enzyme activity profiles during fruit development in tomato cultivars and Solanum pennellii. Plant Physiol (2010) 1.10

Identification of enzyme activity quantitative trait loci in a Solanum lycopersicum x Solanum pennellii introgression line population. Plant Physiol (2011) 1.09

An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce. G3 (Bethesda) (2013) 1.09

Construction of a BAC library and mapping BAC clones to the linkage map of Barramundi, Lates calcarifer. BMC Genomics (2008) 1.02

Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison. Funct Integr Genomics (2004) 0.99

LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes. BMC Bioinformatics (2010) 0.95

Antifreeze protein in Antarctic marine diatom, Chaetoceros neogracile. Mar Biotechnol (NY) (2009) 0.93

Complexities of chromosome landing in a highly duplicated genome: toward map-based cloning of a gene controlling blackleg resistance in Brassica napus. Genetics (2005) 0.92

Screening for overlapping bacterial artificial chromosome clones by PCR analysis with an arbitrary primer. Proc Natl Acad Sci U S A (1998) 0.90

High-resolution mapping of the S-locus in Turnera leads to the discovery of three genes tightly associated with the S-alleles. Mol Genet Genomics (2009) 0.90

Comparative mapping in the Fagaceae and beyond with EST-SSRs. BMC Plant Biol (2012) 0.85

Fine mapping and syntenic integration of the semi-dwarfing gene sdw3 of barley. Funct Integr Genomics (2010) 0.84

A simple formula useful for positional cloning. Genetics (2002) 0.84

Phenotypic and fine genetic characterization of the D locus controlling fruit acidity in peach. BMC Plant Biol (2009) 0.83

An optimal DNA pooling strategy for progressive fine mapping. Genetica (2008) 0.82

Positional cloning without a genome map: using 'Targeted RFLP Subtraction' to isolate dense markers tightly linked to the regA locus of Volvox carteri. Nucleic Acids Res (1998) 0.82

QTL analysis of leaf architecture. J Plant Res (2009) 0.81

Hemi-nested touchdown PCR combined with primer-template mismatch PCR for rapid isolation and sequencing of low molecular weight glutenin subunit gene family from a hexaploid wheat BAC library. BMC Genet (2007) 0.81

Randomly Amplified DNA Fingerprinting: A Culmination of DNA Marker Technologies Based on Arbitrarily-Primed PCR Amplification. J Biomed Biotechnol (2002) 0.81

High-resolution genetic and physical mapping of the cauliflower high-beta-carotene gene Or ( Orange). Mol Genet Genomics (2003) 0.79

Bacterial artificial chromosome libraries of pulse crops: characteristics and applications. J Biomed Biotechnol (2011) 0.76

Predicting the size of the progeny mapping population required to positionally clone a gene. Genetics (2007) 0.76

Combining DNA pooling with selective recombinant genotyping for increased efficiency in fine mapping. Theor Appl Genet (2009) 0.75

Articles by these authors

High density molecular linkage maps of the tomato and potato genomes. Genetics (1992) 11.83

Map-based cloning of a protein kinase gene conferring disease resistance in tomato. Science (1993) 9.00

A microsatellite map of wheat. Genetics (1998) 5.21

Use of isogenic lines and simultaneous probing to identify DNA markers tightly linked to the tm-2a gene in tomato. Genetics (1988) 3.90

The tomato gene Pti1 encodes a serine/threonine kinase that is phosphorylated by Pto and is involved in the hypersensitive response. Cell (1995) 3.60

The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes. EMBO J (1997) 3.19

Coronary perfusion pressure and the return of spontaneous circulation in human cardiopulmonary resuscitation. JAMA (1990) 3.11

Isolation of molecular markers from specific chromosomal intervals using DNA pools from existing mapping populations. Nucleic Acids Res (1991) 2.70

Construction of a yeast artificial chromosome library of tomato and identification of cloned segments linked to two disease resistance loci. Mol Gen Genet (1992) 2.26

Pti4 is induced by ethylene and salicylic acid, and its product is phosphorylated by the Pto kinase. Plant Cell (2000) 1.81

Overexpression of Pto activates defense responses and confers broad resistance. Plant Cell (1999) 1.81

Abundance, variability and chromosomal location of microsatellites in wheat. Mol Gen Genet (1995) 1.80

The effect of standard- and high-dose epinephrine on coronary perfusion pressure during prolonged cardiopulmonary resuscitation. JAMA (1991) 1.74

Characterization of the level, target sites and inheritance of cytosine methylation in tomato nuclear DNA. Plant Mol Biol (1991) 1.73

Map-based cloning of chloronerva, a gene involved in iron uptake of higher plants encoding nicotianamine synthase. Proc Natl Acad Sci U S A (1999) 1.70

Simultaneous aortic, jugular bulb, and right atrial pressures during cardiopulmonary resuscitation in humans. Insights into mechanisms. Circulation (1989) 1.69

Isolation and mapping of microsatellite markers specific for the D genome of bread wheat. Genome (2000) 1.56

Continuous central venous oximetry and shock index in the emergency department: use in the evaluation of clinical shock. Am J Emerg Med (1992) 1.52

RFLP maps of potato and their alignment with the homoeologous tomato genome. Theor Appl Genet (1991) 1.49

Recognition specificity for the bacterial avirulence protein AvrPto is determined by Thr-204 in the activation loop of the tomato Pto kinase. Mol Cell (1998) 1.48

Detection of genetic diversity in closely related bread wheat using microsatellite markers. Theor Appl Genet (1995) 1.41

Thr38 and Ser198 are Pto autophosphorylation sites required for the AvrPto-Pto-mediated hypersensitive response. EMBO J (2000) 1.40

Alleles of Pto and Fen occur in bacterial speck-susceptible and fenthion-insensitive tomato cultivars and encode active protein kinases. Plant Cell (1997) 1.38

The pseudomonas AvrPto protein is differentially recognized by tomato and tobacco and is localized to the plant plasma membrane. Plant Cell (2000) 1.35

Advanced backcross QTL analysis in progenies derived from a cross between a German elite winter wheat variety and a synthetic wheat (Triticum aestivum L.). Theor Appl Genet (2004) 1.32

Innate immunity in plants. Curr Opin Immunol (2001) 1.31

AvrPto-dependent Pto-interacting proteins and AvrPto-interacting proteins in tomato. Proc Natl Acad Sci U S A (2000) 1.31

The Pto bacterial resistance gene and the Fen insecticide sensitivity gene encode functional protein kinases with serine/threonine specificity. Plant Physiol (1995) 1.29

Advanced backcross QTL analysis for the identification of quantitative trait loci alleles from wild relatives of wheat ( Triticum aestivum L.). Theor Appl Genet (2003) 1.26

Analysis of QTLs for yield, yield components, and malting quality in a BC3-DH population of spring barley. Theor Appl Genet (2004) 1.25

SNP discovery by amplicon sequencing and multiplex SNP genotyping in the allopolyploid species Brassica napus. Genome (2010) 1.21

Map-based cloning in crop plants: tomato as a model system II. Isolation and characterization of a set of overlapping yeast artificial chromosomes encompassing the jointless locus. Mol Gen Genet (1994) 1.19

Gene profiling of a compatible interaction between Phytophthora infestans and Solanum tuberosum suggests a role for carbonic anhydrase. Mol Plant Microbe Interact (2005) 1.18

Genetic analysis of two tomato mutants affected in the regulation of iron metabolism. Mol Gen Genet (1996) 1.17

The disease-resistance gene Pto and the fenthion-sensitivity gene fen encode closely related functional protein kinases. Proc Natl Acad Sci U S A (1995) 1.16

Construction and analysis of a microsatellite-based database of European wheat varieties. Theor Appl Genet (2002) 1.14

Molecular genetic analysis of the ripening-inhibitor and non-ripening loci of tomato: a first step in genetic map-based cloning of fruit ripening genes. Mol Gen Genet (1995) 1.13

A characterization of hypothalamic-pituitary-adrenal axis function during and after human cardiac arrest. Crit Care Med (1993) 1.12

Differential transcription of the two glutamine synthetase genes of Bradyrhizobium japonicum. J Bacteriol (1987) 1.11

Analysis of QTLs for yield components, agronomic traits, and disease resistance in an advanced backcross population of spring barley. Genome (2006) 1.10

Ancient origin of pathogen recognition specificity conferred by the tomato disease resistance gene Pto. Proc Natl Acad Sci U S A (2001) 1.09

Rapid transcript accumulation of pathogenesis-related genes during an incompatible interaction in bacterial speck disease-resistant tomato plants. Plant Mol Biol (1999) 1.07

Development and genetic mapping of 127 new microsatellite markers in barley. Theor Appl Genet (2003) 1.06

Long tomato microsatellites are predominantly associated with centromeric regions. Genome (1999) 1.03

Biphasic response in the secretion of gonadotrophin-releasing hormone in ovariectomized ewes injected with oestradiol. J Endocrinol (1989) 1.02

Signal recognition and transduction mediated by the tomato Pto kinase: a paradigm of innate immunity in plants. Microbes Infect (2000) 1.02

Pesticide residues in human milk. Food Cosmet Toxicol (1981) 1.01

The myristylation motif of Pto is not required for disease resistance. Mol Plant Microbe Interact (1998) 1.01

Telomeric arrays display high levels of heritable polymorphism among closely related plant varieties. Proc Natl Acad Sci U S A (1992) 1.00

The Pto kinase mediates a signaling pathway leading to the oxidative burst in tomato. Proc Natl Acad Sci U S A (1996) 1.00

Regulation of folliculogenesis and the determination of ovulation rate in ruminants. Reprod Fertil Dev (2011) 0.97

Partial resistance of tomato to Phytophthora infestans is not dependent upon ethylene, jasmonic acid, or salicylic acid signaling pathways. Mol Plant Microbe Interact (2003) 0.95

Changes in pulsatile LH secretion after ovariectomy in Ile-de-France ewes in two seasons. J Reprod Fertil (1985) 0.95

Invited review: New perspectives on the roles of nutrition and metabolic priorities in the subfertility of high-producing dairy cows. J Dairy Sci (2007) 0.95

Biochemical properties of two protein kinases involved in disease resistance signaling in tomato. J Biol Chem (1998) 0.95

High-resolution mapping of the physical location of the tomato Cf-2 gene. Mol Plant Microbe Interact (1995) 0.95

Endocrine and testicular changes in a short-day seasonally breeding bird, the emu (Dromaius novaehollandiae), in southwestern Australia. Anim Reprod Sci (1998) 0.93

Immediate emergency department external cardiac pacing for prehospital bradyasystolic arrest. Ann Emerg Med (1985) 0.93

Venous hyperoxia after cardiac arrest. Characterization of a defect in systemic oxygen utilization. Chest (1992) 0.92

The major site of the pti1 kinase phosphorylated by the pto kinase is located in the activation domain and is required for pto-pti1 physical interaction. Eur J Biochem (2000) 0.92

Level of nutrition affects leptin concentrations in plasma and cerebrospinal fluid in sheep. J Endocrinol (2000) 0.91

Chromosome 2-specific DNA clones from flow-sorted chromosomes of tomato. Mol Gen Genet (1994) 0.90

A nitrilase-like protein interacts with GCC box DNA-binding proteins involved in ethylene and defense responses. Plant Physiol (1998) 0.90

Construction of a high-resolution genetic map and YAC-contigs in the tomato Tm-2a region. Theor Appl Genet (1996) 0.89

Identification of sex in hop (Humulus lupulus) using molecular markers. Genome (1997) 0.89

Cerebral lactate uptake during cardiopulmonary resuscitation in humans. J Cereb Blood Flow Metab (1991) 0.86

The clinical implications of continuous central venous oxygen saturation during human CPR. Ann Emerg Med (1992) 0.86

Hypothalamic pulse generators. Recent Prog Horm Res (1985) 0.86

Aortic pressure during human cardiac arrest. Identification of pseudo-electromechanical dissociation. Chest (1992) 0.85

Effect of nutritional supplementation on quantities of glucose transporters 1 and 4 in sheep granulosa and theca cells. Reproduction (2001) 0.84

Gonadotrophin release in ovariectomized ewes fed different amounts of coumestrol. J Reprod Fertil (1985) 0.84

A technique revisited: hemodynamic comparison of closed- and open-chest cardiac massage during human cardiopulmonary resuscitation. Crit Care Med (1995) 0.84

Lactic acidosis as a predictor of downtime during cardiopulmonary arrest in dogs. Am J Emerg Med (1985) 0.84

Pre-germination genotypic screening using PCR amplification of half-seeds. Theor Appl Genet (1993) 0.84

Involvement of insulin-like growth factors in the interactions between nutrition and reproduction in female mammals. Hum Reprod (1997) 0.83

Diurnal variation in the response of anoestrous ewes to the ram effect. J Reprod Fertil (1985) 0.83

Microsatellite analysis of genetic diversity in wild and farmed Emus (Dromaius novaehollandiae). J Hered (2003) 0.83

The induction of oestrus and ovulation in seasonally anovular ewes by exposure to rams. J Steroid Biochem (1983) 0.83

In situ localization of yeast artificial chromosome sequences on tomato and potato metaphase chromosomes. Chromosome Res (1996) 0.83

Effect of undernutrition on uterine progesterone and oestrogen receptors and on endocrine profiles during the ovine oestrous cycle. Reprod Fertil Dev (2006) 0.82

Vasopressin can increase coronary perfusion pressure during human cardiopulmonary resuscitation. Acad Emerg Med (1997) 0.82

Dopaminergic control of LH secretion by the A15 nucleus in anoestrous ewes. J Reprod Fertil Suppl (1995) 0.82

Roles of progesterone and oestradiol in determining the temporal sequence and quantitative expression of sexual receptivity and the preovulatory LH surge in the ewe. J Endocrinol (1991) 0.82

Follicle development, endocrine profiles and ovulation rate in adult Merino ewes: effects of early nutrition (pre- and post-natal) and supplementation with lupin grain. Reproduction (2013) 0.81

Lactic acidosis during closed-chest CPR in dogs. Ann Emerg Med (1987) 0.81

Role of hypothalamic catecholamines in the regulation of luteinizing hormone and prolactin secretion in the ewe during seasonal anestrus. Neuroendocrinology (1989) 0.81

Barley telomeres are associated with two different types of satellite DNA sequences. Chromosome Res (1995) 0.81

Arabidopsis genome sequence as a tool for functional genomics in tomato. Genome Biol (2001) 0.81

Simultaneous radial, femoral, and aortic arterial pressures during human cardiopulmonary resuscitation. Crit Care Med (1993) 0.81

Role of male-female interaction in regulating reproduction in sheep and goats. J Reprod Fertil Suppl (1999) 0.80

Comparison of central venous and arterial pH and PCO2 during open-chest CPR in the canine model. Ann Emerg Med (1985) 0.80

Embryo losses in sheep during short-term nutritional supplementation. Reprod Fertil Dev (2012) 0.80

Corpora lutea with a short life-span induced by rams in seasonally anovulatory ewes are prevented by progesterone delaying the preovulatory surge of LH. J Reprod Fertil (1985) 0.80

Nutrient digestibility of Mucuna (Mucuna pruriens var. utilis) bean in guinea fowl (Numida meleagris, L): Effects of heat treatment and levels of incorporation in diets. Br Poult Sci (2009) 0.80

The mature male sheep: a model to study the effects of nutrition on the reproductive axis. Reprod Suppl (2002) 0.80

Insulin and glucose levels during CPR in the canine model. Ann Emerg Med (1985) 0.80

Induction of ovulation in seasonally anovular ewes by the introduction of rams: effects of progesterone and active immunization against androstenedione. Aust J Biol Sci (1981) 0.80

Pituitary and testicular endocrine responses to exogenous gonadotrophin-releasing hormone (GnRH) and luteinising hormone in male dogs treated with GnRH agonist implants. Reprod Fertil Dev (2007) 0.80