Published in J Biomol Struct Dyn on April 01, 1993
UV spectroscopic identification and thermodynamic analysis of protonated third strand deoxycytidine residues at neutrality in the triplex d(C(+)-T)6:[d(A-G)6.d(C-T)6]; evidence for a proton switch. Nucleic Acids Res (1995) 0.98
Complete disproportionation of duplex poly(dT)*poly(dA) into triplex poly(dT)*poly(dA)*poly(dT) and poly(dA) by coralyne. Nucleic Acids Res (2002) 0.94
The fragile X chromosome (GCC) repeat folds into a DNA tetraplex at neutral pH. Nucleic Acids Res (2001) 0.89
The binding affinity of Ff gene 5 protein depends on the nearest-neighbor composition of the ssDNA substrate. Biophys J (1999) 0.83
Conformational properties of DNA dodecamers containing four tandem repeats of the CNG triplets. Nucleic Acids Res (1998) 0.82
The high binding affinity of phosphorothioate-modified oligomers for Ff gene 5 protein is moderated by the addition of C-5 propyne or 2'-O-methyl modifications. Nucleic Acids Res (2002) 0.81
Ultrafast excited-state dynamics of RNA and DNA C tracts. Chem Phys (2008) 0.79
A soft-modeling approach to interpret thermodynamic and conformational transitions of polynucleotides. Biophys J (1997) 0.78
A circular dichroism study of poly dG, poly dC, and poly dG:dC. Biopolymers (1974) 2.10
Circular dichroism spectra of poly[d(AC):d(GT)], poly[r(AC):r(GU)], and hybrids poly[d(AC):r(GU)] and poly[r(AC):d(GT)] in the presence of ethanol. Biopolymers (1975) 1.66
The ultraviolet circular dichroism of some natural DNAs and an analysis of the spectra for sequence information. Biopolymers (1972) 1.47
Evidence from CD spectra that d(purine).r(pyrimidine) and r(purine).d(pyrimidine) hybrids are in different structural classes. Nucleic Acids Res (1994) 1.20
Circular dichroism spectra show that repeating dinucleotide DNAs may form helices in which every other base is looped out. Nucleic Acids Res (1980) 1.15
Dehydrated circular DNA: electron microscopy of ethanol-condensed molecules. J Mol Biol (1976) 1.15
A comparison of the circular dichroism spectra of synthetic DNA sequences of the homopurine . homopyrimidine and mixed purine- pyrimidine types. Nucleic Acids Res (1978) 1.13
At physiological pH, d(CCG)15 forms a hairpin containing protonated cytosines and a distorted helix. Biochemistry (1997) 1.11
Circular dichroism evidence for G-U and G-T base pairing in poly[r(G-U)] and poly[d(G-T)]. Biopolymers (1977) 1.08
The analysis of circular dichroism spectra of natural DNAs using spectral components from synthetic DNAs. Biopolymers (1978) 1.07
Neutron scattering data on reconstituted complexes of fd deoxyribonucleic acid and gene 5 protein show that the deoxyribonucleic acid is near the center. Biochemistry (1982) 1.04
The binding of fd gene 5 protein to polydeoxynucleotides: evidence from CD measurements for two binding modes. J Biomol Struct Dyn (1986) 1.04
Circular dichroism measurements show that C.C+ base pairs can coexist with A.T base pairs between antiparallel strands of an oligodeoxynucleotide double-helix. Nucleic Acids Res (1984) 1.01
CD, absorption and thermodynamic analysis of repeating dinucleotide DNA, RNA and hybrid duplexes [d/r(AC)]12.[d/r(GT/U)]12 and the influence of phosphorothioate substitution. Nucleic Acids Res (1997) 1.01
Dehydrated circular DNA: circular dichroism of molecules in ethanolic solutions. Biopolymers (1978) 1.01
A.T and C.C+ base pairs can form simultaneously in a novel multistranded DNA complex. Biochemistry (1990) 1.00
Ultraviolet dichroic ratio of DNA from T2 and T5 bacteriophages. Biopolymers (1968) 1.00
CD of homopolymer DNA-RNA hybrid duplexes and triplexes containing A-T or A-U base pairs. Nucleic Acids Res (1986) 1.00
Magnetic circular dichroism study on synthetic polynucleotides, bacteriophage structure, and DNA's. Biopolymers (1971) 0.99
CD of six different conformational rearrangements of poly[d(A-G).d(C-T)] induced by low pH. Nucleic Acids Res (1988) 0.99
The circular dichroism of synthetic ribonucleic acids and the influence of uracil on conformation. Biopolymers (1972) 0.98
Interaction of aspartate transcarbamylase with regulatory nucleotides. J Biol Chem (1973) 0.98
Circular dichroism and fluorescence-detected circular dichroism of deoxyribonucleic acid and poly[d(A-C).d(G-T)] in ethanolic solutions: a new method for estimating circular intensity differential scattering. Biochemistry (1980) 0.97
Reductive methylation and 13C NMR studies of the lysyl residues of fd gene 5 protein. Lysines 24, 46, and 69 may be involved in nucleic acid binding. J Biol Chem (1988) 0.97
Photochemical demonstration of stacked C.C+ base pairs in a novel DNA secondary structure. Biochemistry (1985) 0.95
The circular dichroism of poly d(AAT):d(ATT) and poly r(AAU):r(AUU). A test of the first-neighbor hypothesis. Biopolymers (1973) 0.95
13C NMR of methylated lysines of fd gene 5 protein: evidence for a conformational change involving lysine 24 upon binding of a negatively charged lanthanide chelate. Biochemistry (1989) 0.95
Independence of photoproduct formation on DNA conformation. Photochem Photobiol (1976) 0.93
Evidence from CD spectra and melting temperatures for stable Hoogsteen-paired oligomer duplexes derived from DNA and hybrid triplexes. Nucleic Acids Res (1999) 0.92
The circular dichroism and X-ray diffraction of DNA condensed from ethanolic solutions. Nucleic Acids Res (1979) 0.91
Structural properties of Friedreich's ataxia d(GAA) repeats. Biochim Biophys Acta (1999) 0.89
A CD determination of the alpha-helix contents of the coat proteins of four filamentous bacteriophages: fd, IKe, Pf1, and Pf3. Biopolymers (1989) 0.89
The circular dichroism of a Drosophila melanogaster satellite DNA. J Mol Biol (1974) 0.89
Structures of fd gene 5 protein.nucleic acid complexes: a combined solution scattering and electron microscopy study. J Mol Biol (1995) 0.87
Hybrid oligomer duplexes formed with phosphorothioate DNAs: CD spectra and melting temperatures of S-DNA.RNA hybrids are sequence-dependent but consistent with similar heteronomous conformations. Biochemistry (1998) 0.86
Vacuum UV CD spectra of homopolymer duplexes and triplexes containing A.T or A.U base pairs. Nucleic Acids Res (1991) 0.86
A circular dichroism study of the primary structures of three crab satellite DNA's rich in A:T base pairs. Biopolymers (1974) 0.84
A.U and G.C base pairs in synthetic RNAS have characteristic vacuum UV CD bands. Biopolymers (1990) 0.84
SELEX selection of high-affinity oligonucleotides for bacteriophage Ff gene 5 protein. Biochemistry (2001) 0.84
Circular dichroism and electron microscopy of a core Y61F mutant of the F1 gene 5 single-stranded DNA-binding protein and theoretical analysis of CD spectra of four Tyr --> Phe substitutions. Biochemistry (1998) 0.83
Ff gene 5 protein has a high binding affinity for single-stranded phosphorothioate DNA. Biochemistry (2001) 0.83
Analysis of the electrophoretic properties of double-stranded DNA and RNA in agarose gels at a finite voltage gradient. Biopolymers (1984) 0.83
The binding affinity of Ff gene 5 protein depends on the nearest-neighbor composition of the ssDNA substrate. Biophys J (1999) 0.83
CD measurements show that fd and IKe gene 5 proteins undergo minimal conformational changes upon binding to poly(rA). Biochemistry (1989) 0.82
Decisions and justifications by community mental health providers about hypothetical ethical dilemmas. Psychiatr Serv (1998) 0.82
Specificity of the binding of fd gene 5 protein to polydeoxyribonucleotides. J Biomol Struct Dyn (1989) 0.82
A circular dichroism study of the structure of Penicillium chrysogenum mycovirus. Nucleic Acids Res (1983) 0.81
A thin quartz cell suitable for vacuum ultraviolet absorption and circular dichroism measurements. Anal Biochem (1984) 0.81
Complex of fd gene 5 protein and double-stranded RNA. J Mol Biol (1984) 0.80
Flow linear dichroism spectra of four filamentous bacteriophages: DNA and coat protein contributions. Biopolymers (1992) 0.80
Circular dichroism of two conformations of poly[d(G-C)] induced by low pH. Nucleic Acids Res (1986) 0.80
Tyrosine mutant helps define overlapping CD bands from fd gene 5 protein.nucleic acid complexes. Biopolymers (1997) 0.79
Analysis of an RNA pseudoknot structure by CD spectroscopy. J Biomol Struct Dyn (1992) 0.79
Circular dichroism spectroscopy of three tyrosine-to-phenylalanine substitutions of fd gene 5 protein. Biochemistry (1995) 0.79
Structure of the fd DNA--gene 5 protein complex in solution. A neutron small-angle scattering study. J Mol Biol (1981) 0.79
On the first-neighbor analysis of nucleic acid CD spectra: the definitive T matrix and considerations of various methods. Biopolymers (1984) 0.79
Preparation and properties of the repeating sequence polymers d(A-I-C)n-d(I-C-T)n and d(A-G-C)n-d(G-C-T)n. Biochemistry (1976) 0.79
Characterization of the Pf3 single-strand DNA binding protein by circular dichroism spectroscopy. Biochemistry (1993) 0.78
The resolution of nucleic acid-ligand binding sites by CD first-neighbor analysis. Biopolymers (1984) 0.78
Circular dichroism of double-stranded RNA in the presence of salt and ethanol. Biopolymers (1986) 0.77
Circular dichroism spectra of DNA oligomers show that short interior stretches of C.C+ base pairs do not form in duplexes with A.T base pairs. Biochemistry (1988) 0.77
fd gene 5 protein binds to double-stranded polydeoxyribonucleotides poly(dA.dT) and poly[d(A-T).d(A-T)]. Biochemistry (1987) 0.76
CD evidence that the alternating purine-pyrimidine sequence poly[d(A-C).d(G-T)], but not poly[d(A-T).d(A-T)], undergoes an acid-induced transition to a modified secondary conformation. Nucleic Acids Res (1990) 0.75
Sequence-dependence of the CD of synthetic double-stranded RNAs containing inosinate instead of guanylate subunits. Biopolymers (1986) 0.75
Study of the circular dichroism of bacteriophage phi 6 and phi 6 nucleocapsid. Biopolymers (1986) 0.75
A method for estimating the nearest neighbor base-pair content of RNAs using CD and absorption spectroscopy. Biopolymers (1991) 0.75
Evidence for sequence heterogeneity among the double-stranded RNA segments of Penicillium chrysogenum mycovirus. J Gen Virol (1984) 0.75
The circular dichroism of three Drosophila virilis satellite DNAs. J Mol Biol (1974) 0.75
The trouble with managed care. Conn Med (1995) 0.75
Buoyant densities of natural and synthetic DNA's in CsCl and Cs2SO4 considered as sequence-dependent properties. Biopolymers (1974) 0.75
Evidence for a salt-induced conformational transition in UV-irradiated superhelical PM2 DNA. Biochim Biophys Acta (1993) 0.75
An estimate of the nearest neighbor base-pair content of 5S RNA using CD and absorption spectroscopy. Biopolymers (1991) 0.75
Role of Tyr-22 in the binding of Pf3 ssDNA binding protein to nucleic acids. Biochemistry (1995) 0.75