Small subunit ribosomal RNA+ of Hexamita inflata and the quest for the first branch in the eukaryotic tree.

PubWeight™: 1.71‹?› | Rank: Top 3%

🔗 View Article (PMID 8515782)

Published in Mol Biochem Parasitol on May 01, 1993

Authors

D D Leipe1, J H Gunderson, T A Nerad, M L Sogin

Author Affiliations

1: Center for Molecular Evolution, Marine Biological Laboratory, Woods Mole, MA 02543.

Articles citing this

Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. Proc Natl Acad Sci U S A (1996) 7.17

Biology of Giardia lamblia. Clin Microbiol Rev (2001) 5.35

Kingdom protozoa and its 18 phyla. Microbiol Rev (1993) 3.74

Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins. Proc Natl Acad Sci U S A (1999) 2.72

Seven newly discovered intron positions in the triose-phosphate isomerase gene: evidence for the introns-late theory. Proc Natl Acad Sci U S A (1995) 1.83

Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions. Proc Biol Sci (2000) 1.69

A mitochondrial-like chaperonin 60 gene in Giardia lamblia: evidence that diplomonads once harbored an endosymbiont related to the progenitor of mitochondria. Proc Natl Acad Sci U S A (1998) 1.68

A common evolutionary origin for mitochondria and hydrogenosomes. Proc Natl Acad Sci U S A (1996) 1.64

Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes. J Mol Evol (2004) 1.60

Molecular techniques for detection, species differentiation, and phylogenetic analysis of microsporidia. Clin Microbiol Rev (1999) 1.50

Presence of a mitochondrial-type 70-kDa heat shock protein in Trichomonas vaginalis suggests a very early mitochondrial endosymbiosis in eukaryotes. Proc Natl Acad Sci U S A (1996) 1.49

Targeting and translocation of proteins into the hydrogenosome of the protist Trichomonas: similarities with mitochondrial protein import. EMBO J (1997) 1.45

Mitochondrial-type assembly of FeS centers in the hydrogenosomes of the amitochondriate eukaryote Trichomonas vaginalis. Proc Natl Acad Sci U S A (2004) 1.43

Hsp60 is targeted to a cryptic mitochondrion-derived organelle ("crypton") in the microaerophilic protozoan parasite Entamoeba histolytica. Mol Cell Biol (1999) 1.39

Broadly sampled multigene trees of eukaryotes. BMC Evol Biol (2008) 1.32

Transient and selectable transformation of the parasitic protist Trichomonas vaginalis. Proc Natl Acad Sci U S A (1997) 1.29

Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin. Proc Natl Acad Sci U S A (1997) 1.22

Multiple secondary origins of the anaerobic lifestyle in eukaryotes. Philos Trans R Soc Lond B Biol Sci (2006) 1.17

Chitinase secretion by encysting Entamoeba invadens and transfected Entamoeba histolytica trophozoites: localization of secretory vesicles, endoplasmic reticulum, and Golgi apparatus. Infect Immun (1999) 1.17

Protein trafficking in kinetoplastid protozoa. Microbiol Rev (1995) 1.14

Stage-specific expression and targeting of cyst wall protein-green fluorescent protein chimeras in Giardia. Mol Biol Cell (2000) 1.13

Electron microscopic identification of the intestinal protozoan flagellates of the xylophagous cockroach Parasphaeria boleiriana from Brazil. Parasitol Res (2003) 1.06

Similarity between a ubiquitous promoter element in an ancient eukaryote and mammalian initiator elements. Proc Natl Acad Sci U S A (1994) 1.05

Morphological and molecular biological characterization of Pleistophora aegyptiaca sp. nov. infecting the Red Sea fish Saurida tumbil. Parasitol Res (2011) 0.99

A non-canonical genetic code in an early diverging eukaryotic lineage. EMBO J (1996) 0.95

The region encompassing the procyclic acidic repetitive protein (PARP) gene promoter plays a role in plasmid DNA replication in Trypanosoma brucei. Nucleic Acids Res (1994) 0.90

Calcium entry in Trypanosoma brucei is regulated by phospholipase A2 and arachidonic acid. Biochem J (1998) 0.87

Phylogenetic position of the mitochondrion-lacking protozoan Trichomonas tenax, based on amino acid sequences of elongation factors 1alpha and 2. J Mol Evol (1997) 0.82

Artificial linear mini-chromosomes for Trypanosoma brucei. Nucleic Acids Res (1996) 0.82

Molecular phylogenetic analyses of the mitochondrial ADP-ATP carriers: the Plantae/Fungi/Metazoa trichotomy revisited. Proc Natl Acad Sci U S A (2001) 0.81

Carbohydrate and Amino Acid Fermentation in the Free-Living Primitive Protozoon Hexamita sp. Appl Environ Microbiol (1998) 0.78

Assessing whether alpha-tubulin sequences are suitable for phylogenetic reconstruction of Ciliophora with insights into its evolution in euplotids. PLoS One (2012) 0.77

Comparative analysis of the ribosomal components of the hydrogenosome-containing protist, Trichomonas vaginalis. J Mol Evol (2004) 0.76

Prokaryotic and eukaryotic features observed on the secondary structures of Giardia SSU rRNAs and its phylogenetic implications. Parasitol Res (2007) 0.75

Articles by these authors

Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Natl Acad Sci U S A (1985) 37.69

The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene (1988) 18.61

Phylogenetic meaning of the kingdom concept: an unusual ribosomal RNA from Giardia lamblia. Science (1989) 5.51

Ribosomal RNA sequence shows Pneumocystis carinii to be a member of the fungi. Nature (1988) 5.21

Evolutionary diversity of eukaryotic small-subunit rRNA genes. Proc Natl Acad Sci U S A (1986) 4.27

Monophyletic origins of the metazoa: an evolutionary link with fungi. Science (1993) 4.18

Structurally distinct, stage-specific ribosomes occur in Plasmodium. Science (1987) 4.08

The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata. Mol Biol Evol (1985) 3.95

Nucleotide sequence of 5 S ribosomal RNA precursor from Bacillus subtilis. J Biol Chem (1976) 3.20

Evolutionary relationships among pathogenic Candida species and relatives. J Bacteriol (1991) 2.95

Sequence studies on 16S ribosomal RNA from a blue-green alga. J Mol Evol (1975) 2.70

Primary sequences of two small subunit ribosomal RNA genes from Plasmodium falciparum. Mol Biochem Parasitol (1988) 2.48

Structural diversity of eukaryotic small subunit ribosomal RNAs. Evolutionary implications. Ann N Y Acad Sci (1987) 2.36

Phylogenetic measurement in procaryotes by primary structural characterization. J Mol Evol (1971) 2.29

Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA. Proc Natl Acad Sci U S A (2001) 2.20

Diversity and population structure of sewage-derived microorganisms in wastewater treatment plant influent. Environ Microbiol (2009) 2.20

Primary structure of the Paramecium tetraurelia small-subunit rRNA coding region: phylogenetic relationships within the Ciliophora. J Mol Evol (1986) 2.06

Phylogenetic relationships between chlorophytes, chrysophytes, and oomycetes. Proc Natl Acad Sci U S A (1987) 1.93

The unusually long small subunit ribosomal RNA of Phreatamoeba balamuthi. Nucleic Acids Res (1994) 1.89

A mitochondrial-like chaperonin 60 gene in Giardia lamblia: evidence that diplomonads once harbored an endosymbiont related to the progenitor of mitochondria. Proc Natl Acad Sci U S A (1998) 1.68

Length variation in eukaryotic rRNAs: small subunit rRNAs from the protists Acanthamoeba castellanii and Euglena gracilis. Gene (1986) 1.65

Phylogenetic diversity and position of the genus Campylobacter. Syst Appl Microbiol (1987) 1.60

Serial analysis of the gut and respiratory microbiome in cystic fibrosis in infancy: interaction between intestinal and respiratory tracts and impact of nutritional exposures. MBio (2012) 1.58

Sequence of the small subunit ribosomal RNA gene expressed in the bloodstream stages of Plasmodium berghei: evolutionary implications. J Protozool (1986) 1.58

The Giardia genome project database. FEMS Microbiol Lett (2000) 1.57

Characterization of an axenic strain of Hartmannella vermiformis obtained from an investigation of nosocomial legionellosis. J Protozool (1991) 1.56

Secondary structure of the Dictyostelium discoideum small subunit ribosomal RNA. Nucleic Acids Res (1983) 1.56

Phylogenetic evidence for the acquisition of ribosomal RNA introns subsequent to the divergence of some of the major Tetrahymena groups. EMBO J (1986) 1.53

Prevalence of streptococci and increased polymicrobial diversity associated with cystic fibrosis patient stability. J Bacteriol (2012) 1.52

Ribosomal RNA sequences of Sarcocystis muris, Theileria annulata and Crypthecodinium cohnii reveal evolutionary relationships among apicomplexans, dinoflagellates, and ciliates. Mol Biochem Parasitol (1991) 1.51

Occurrence of infected amoebae in cooling towers compared with natural aquatic environments: implications for emerging pathogens. Environ Sci Technol (2006) 1.51

Phylogeny of the attine ant fungi based on analysis of small subunit ribosomal RNA gene sequences. Science (1994) 1.46

Partial purification and properties of a ribosomal RNA maturation endonuclease from Bacillus subtilis. J Biol Chem (1977) 1.44

Localization of a binding site for ribosomal protein S8 within the 16S ribosomal ribonucleic acid of Escherichia coli. J Bacteriol (1973) 1.36

Human parasite finds taxonomic home. Nature (1996) 1.36

Low variation in ribosomal DNA and internal transcribed spacers of the symbiotic fungi of leaf-cutting ants (Attini: Formicidae). Braz J Med Biol Res (2004) 1.34

Phylogenetic characterization of epibiotic bacteria in the accessory nidamental gland and egg capsules of the squid Loligo pealei (Cephalopoda:Loliginidae). Environ Microbiol (2001) 1.31

A self-splicing group I intron in the nuclear pre-rRNA of the green alga, Ankistrodesmus stipitatus. Nucleic Acids Res (1991) 1.30

Nucleotide sequence of Dictyostelium discoideum 5.8S ribosomal ribonucleic acid: evolutionary and secondary structural implications. Biochemistry (1982) 1.28

Phylogeny of the genera Entamoeba and Endolimax as deduced from small-subunit ribosomal RNA sequences. Mol Biol Evol (1999) 1.27

Primary structure of the Leishmania donovani small subunit ribosomal RNA coding region. Nucleic Acids Res (1988) 1.25

Primary structure of the Chlorella vulgaris small subunit ribosomal RNA coding region. Nucleic Acids Res (1989) 1.23

Phylogenetic relationships within the class Oligohymenophorea, phylum Ciliophora, inferred from the complete small subunit rRNA gene sequences of Colpidium campylum, Glaucoma chattoni, and Opisthonecta henneguyi. J Mol Evol (1991) 1.20

In vitro maturation of precursors of 5S ribosomal RNA from Bacillus subtilis. Nature (1974) 1.17

The connexins and their family tree. Soc Gen Physiol Ser (1994) 1.17

Primary structure of the Neurospora crassa small subunit ribosomal RNA coding region. Nucleic Acids Res (1986) 1.17

Sequence of the small subunit ribosomal RNA gene from the hypotrichous ciliate Euplotes aediculatus. J Protozool (1986) 1.15

Phylogeny of trichomonads inferred from small-subunit rRNA sequences. J Eukaryot Microbiol (1995) 1.10

Molecular evolution in hypotrichous ciliates: sequence of the small subunit ribosomal RNA genes from Onychodromus quadricornutus and Oxytricha granulifera (Oxytrichidae, Hypotrichida, Ciliophora). J Mol Evol (1991) 1.09

Phylogenetic relationships of a large marine Beggiatoa. Syst Appl Microbiol (1999) 1.07

Observations on the post-transcriptionally modified nucleotides in the 16S ribosomal ribonucleic acid. J Bacteriol (1972) 1.06

Phylogenetic position of some Chlorella species within the chlorococcales based upon complete small-subunit ribosomal RNA sequences. J Mol Evol (1990) 1.05

Sequence and phylogenetic position of a class II aldolase gene in the amitochondriate protist, Giardia lamblia. Gene (1998) 1.04

DNA sequence, structure, and phylogenetic relationship of the small subunit rRNA coding region of mitochondrial DNA from Podospora anserina. J Mol Evol (1989) 1.04

A molecular reassessment of the Leptomyxid amoebae. Protist (2000) 1.03

The evolution of the Vahlkampfiidae as deduced from 16S-like ribosomal RNA analysis. J Eukaryot Microbiol (1993) 1.02

Acinetobacter, Aeromonas and Trichococcus populations dominate the microbial community within urban sewer infrastructure. Environ Microbiol (2012) 1.01

The nucleariid amoebae: more protists at the animal-fungal boundary. J Eukaryot Microbiol (2001) 1.00

Evolutionary relationships among "jakobid" flagellates as indicated by alpha- and beta-tubulin phylogenies. Mol Biol Evol (2001) 0.99

Molecular phylogeny of parabasalids based on small subunit rRNA sequences, with emphasis on the Trichomonadinae subfamily. J Eukaryot Microbiol (2000) 0.98

Dientamoeba fragilis shares a recent common evolutionary history with the trichomonads. Mol Biochem Parasitol (1997) 0.98

Ribosomal RNA genes of Pneumocystis carinii. J Protozool (1989) 0.97

Procaryote phylogeny. I. Concerning the relatedness of Aerobacter aerogenes to Escherichia coli. J Mol Evol (1974) 0.97

Molecular phylogenetic analysis of actin genic regions from Achlya bisexualis (Oomycota) and Costaria costata (Chromophyta). J Mol Evol (1991) 0.96

A molecular phylogenetic framework for the phylum Ctenophora using 18S rRNA genes. Mol Phylogenet Evol (2001) 0.96

Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthase from the microsporidian Spraguea lophii. Biol Bull (1997) 0.96

Assessment of phylogenetic relationships among ciliated protists using partial ribosomal RNA sequences derived from reverse transcripts. Biosystems (1988) 0.96

Phylogenomic analysis of the alpha proteasome gene family from early-diverging eukaryotes. J Mol Evol (2000) 0.95

Universal tree of life. Nature (1993) 0.94

Reclinomonas americana N. G., N. Sp., a new freshwater heterotrophic flagellate. J Eukaryot Microbiol (1993) 0.93

Phylogenetic relationships of Blepharisma americanum and Colpoda inflata within the phylum ciliophora inferred from complete small subunit rRNA gene sequences. J Protozool (1991) 0.92

Primary structure and phylogenetic relationships of a malate dehydrogenase gene from Giardia lamblia. J Mol Evol (1999) 0.91

Phylogenetic relationships between the Acantharea and the Polycystinea: a molecular perspective on Haeckel's Radiolaria. Proc Natl Acad Sci U S A (1997) 0.91

Cloning and sequencing of an acetyl-CoA synthetase (ADP-forming) gene from the amitochondriate protist, Giardia lamblia. Gene (1999) 0.90

Starch gel electrophoresis: an effective method for separation of pathogenic and nonpathogenic Naegleria strains. J Protozool (1979) 0.90

Molecular cloning of CYP1A from the estuarine fish Fundulus heteroclitus and phylogenetic analysis of CYP1 genes: update with new sequences. Comp Biochem Physiol C Pharmacol Toxicol Endocrinol (1998) 0.90

Core histones of the amitochondriate protist, Giardia lamblia. Mol Biol Evol (2000) 0.88

Ultrastructure of Trimastix pyriformis (Klebs) Bernard et al.: similarities of Trimastix species with retortamonad and jakobid flagellates. Protist (1999) 0.87

New Insights into the Phylogeny of Trichomonads Inferred from Small Subunit rRNA Sequences. Protist (2009) 0.87

Giardia lamblia expresses a proteobacterial-like DnaK homolog. Mol Biol Evol (2001) 0.86

Precursor of 5S ribosomal ribonucleic acid in the blue-green alga Anacystis nidulans. J Bacteriol (1974) 0.86

The evolutionary origins of eukaryotic protein disulfide isomerase domains: new evidence from the Amitochondriate protist Giardia lamblia. Mol Biol Evol (2001) 0.85

Phylogenetic position of the trichomonad parasite of turkeys, Histomonas meleagridis (Smith) Tyzzer, inferred from small subunit rRNA sequence. J Eukaryot Microbiol (2001) 0.83

Chemically defined media for the cultivation of Naegleria: pathogenic and high temperature tolerant species. J Protozool (1983) 0.83

Phylogenetic measurement in procaryotes by primary structural characterization. J Mol Evol (1972) 0.82

Identification of cytochrome P-450 1A (CYP1A) genes from two teleost fish, toadfish (Opsanus tau) and scup (Stenotomus chrysops), and phylogenetic analysis of CYP1A genes. Biochem J (1995) 0.82

Distribution and possible interrelationships of pathogenic and nonpathogenicAcanthamoeba from aquatic environments. Microb Ecol (1982) 0.81

Insights into the evolution of nuclear dualism in the ciliates revealed by phylogenetic analysis of rRNA sequences. J Eukaryot Microbiol (1996) 0.81

Microbiology. Giants among the prokaryotes. Nature (1993) 0.81