Published in J Mol Graph on October 01, 1995
The ribosomal database project. Nucleic Acids Res (1993) 17.20
A phylogenetic definition of the major eubacterial taxa. Syst Appl Microbiol (1985) 11.82
Reduced surface: an efficient way to compute molecular surfaces. Biopolymers (1996) 10.62
Automated docking of flexible ligands: applications of AutoDock. J Mol Recognit (1996) 6.51
The Ribosomal Database Project. Nucleic Acids Res (1992) 5.21
Distributed automated docking of flexible ligands to proteins: parallel applications of AutoDock 2.4. J Comput Aided Mol Des (1996) 5.09
Automated docking of substrates to proteins by simulated annealing. Proteins (1990) 4.49
Structural symmetry and protein function. Annu Rev Biophys Biomol Struct (2000) 4.11
The reactivity of anti-peptide antibodies is a function of the atomic mobility of sites in a protein. Nature (1984) 4.05
Tomato bushy stunt virus at 2.9 A resolution. Nature (1978) 2.87
Structure, function and properties of antibody binding sites. J Mol Biol (1991) 2.84
Morphology of protein-protein interfaces. Structure (1998) 1.67
Structure of tomato busy stunt virus IV. The virus particle at 2.9 A resolution. J Mol Biol (1983) 1.64
Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III. J Biol Chem (2000) 1.54
The atomic mobility component of protein antigenicity. Annu Rev Immunol (1985) 1.40
Shape analysis of molecular surfaces. Biopolymers (1993) 1.27
Soluble proteins: size, shape and function. Trends Biochem Sci (1993) 1.22
The structure of calcyclin reveals a novel homodimeric fold for S100 Ca(2+)-binding proteins. Nat Struct Biol (1995) 1.19
Viral evolution in response to the broad-based retroviral protease inhibitor TL-3. J Virol (2001) 1.03
Approximation and characterization of molecular surfaces. Biopolymers (1993) 1.03
Modelling of factor Xa-inhibitor complexes: a computational flexible docking approach. Proteins (1999) 1.01
Recognition and interactions controlling the assemblies of beta barrel domains. Biophys J (1986) 0.99
Electrostatic orientation of the electron-transfer complex between plastocyanin and cytochrome c. J Biol Chem (1991) 0.98
Analysis of a data set of paired uncomplexed protein structures: new metrics for side-chain flexibility and model evaluation. Proteins (2001) 0.95
Alteration of substrate and inhibitor specificity of feline immunodeficiency virus protease. J Virol (2000) 0.94
Molecular analysis of the feline immunodeficiency virus protease: generation of a novel form of the protease by autoproteolysis and construction of cleavage-resistant proteases. J Virol (1997) 0.94
Residue-residue mean-force potentials for protein structure recognition. Protein Eng (1997) 0.93
Automated docking in crystallography: analysis of the substrates of aconitase. Proteins (1993) 0.92
Revisiting catalysis by chymotrypsin family serine proteases using peptide substrates and inhibitors with unnatural main chains. J Biol Chem (1999) 0.92
The coherence of synthetic telomeres. Nucleic Acids Res (1991) 0.92
Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease. Proteins (2000) 0.90
Constructing lattice models of protein chains with side groups. J Comput Biol (1995) 0.90
Integrating computation and visualization for biomolecular analysis: an example using python and AVS. Pac Symp Biocomput (1999) 0.89
Recognition of protein structure on coarse lattices with residue-residue energy functions. Protein Eng (1997) 0.84
Recognition templates for predicting adenylate-binding sites in proteins. J Mol Biol (2001) 0.84
Ionization state and molecular docking studies for the macrophage migration inhibitory factor: the role of lysine 32 in the catalytic mechanism. J Mol Recognit (2000) 0.83
Building self-avoiding lattice models of proteins using a self-consistent field optimization. Proteins (1996) 0.83
Coevolution and subsite decomposition for the design of resistance-evading HIV-1 protease inhibitors. J Mol Biol (1999) 0.81
Visualizing biological molecules. Sci Am (1992) 0.81
Molecular illustration in black and white. J Mol Graph (1992) 0.80
Docking of 4-oxalocrotonate tautomerase substrates: implications for the catalytic mechanism. Biopolymers (1999) 0.79
Connexin 26 expression and extensive gap junctional coupling in cultures of GT1-7 cells secreting gonadotropin-releasing hormone. Neuroendocrinology (1999) 0.79
Configurational transitions in Fourier series-represented DNA supercoils. Biophys J (1997) 0.78
Computational coevolution of antiviral drug resistance. Artif Life (1998) 0.77
Coevolutionary analysis of resistance-evading peptidomimetic inhibitors of HIV-1 protease. Proc Natl Acad Sci U S A (1999) 0.77
Texture mapping parametric molecular surfaces. J Mol Graph (1995) 0.77
Approximation and visualization of large-scale motion of protein surfaces. J Mol Graph (1995) 0.77
Interactive modeling of supramolecular assemblies. J Mol Graph Model (1998) 0.77
Transmembrane alpha-helices in the gap junction membrane channel: systematic search of packing models based on the pair potential function. Microsc Res Tech (2001) 0.76
Conditioned media from the injured lower vertebrate CNS promote neurite outgrowth from mammalian brain neurons in vitro. Brain Res (1987) 0.76
Inhibition of phosphorylcholine binding to antibodies using synthetic peptides. Nature (1987) 0.76
Serials standards work: the next frontier. Libr Resour Tech Serv (1990) 0.75
Probes for double helical DNA sequence information: molecular mechanics study of a proposed model. J Biomol Struct Dyn (1987) 0.75
Accurate mean-force pairwise-residue potentials for discrimination of protein folds. Pac Symp Biocomput (1997) 0.75
Adjusting potential energy functions for lattice models of chain molecules. Proteins (1996) 0.75
Real time surface reconstruction for moving molecular fragments. Pac Symp Biocomput (1997) 0.75