Published in Appl Environ Microbiol on December 01, 2000
Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microbiol (2006) 6.67
PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample. Appl Environ Microbiol (2005) 5.97
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl Environ Microbiol (2002) 5.90
Biodiversity of vibrios. Microbiol Mol Biol Rev (2004) 4.25
Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities. Appl Environ Microbiol (2002) 4.14
Isolation of novel pelagic bacteria from the German bight and their seasonal contributions to surface picoplankton. Appl Environ Microbiol (2001) 2.76
Combining catalyzed reporter deposition-fluorescence in situ hybridization and microautoradiography to detect substrate utilization by bacteria and Archaea in the deep ocean. Appl Environ Microbiol (2004) 2.64
Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria). Proc Natl Acad Sci U S A (2008) 2.20
Possible quorum sensing in marine snow bacteria: production of acylated homoserine lactones by Roseobacter strains isolated from marine snow. Appl Environ Microbiol (2002) 2.14
An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization. Appl Environ Microbiol (2003) 2.09
Environmental and gut bacteroidetes: the food connection. Front Microbiol (2011) 2.01
Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill. Proc Natl Acad Sci U S A (2011) 2.00
Fingerprinting microbial assemblages from the oxic/anoxic chemocline of the Black Sea. Appl Environ Microbiol (2003) 1.98
Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea. Appl Environ Microbiol (2002) 1.96
Use of 16S ribosomal DNA for delineation of marine bacterioplankton species. Appl Environ Microbiol (2002) 1.79
Members of a readily enriched beta-proteobacterial clade are common in surface waters of a humic lake. Appl Environ Microbiol (2003) 1.74
Identification of DNA-synthesizing bacterial cells in coastal North Sea plankton. Appl Environ Microbiol (2002) 1.48
Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions. Appl Environ Microbiol (2004) 1.47
Comparison of cellular and biomass specific activities of dominant bacterioplankton groups in stratified waters of the Celtic Sea. Appl Environ Microbiol (2001) 1.47
Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing. ISME J (2010) 1.45
Flow sorting of marine bacterioplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2004) 1.45
Automated enumeration of groups of marine picoplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2003) 1.42
Comparison of vertical distributions of prokaryotic assemblages in the anoxic Cariaco Basin and Black Sea by use of fluorescence in situ hybridization. Appl Environ Microbiol (2006) 1.41
Molecular analysis of shower curtain biofilm microbes. Appl Environ Microbiol (2004) 1.41
Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis. Microb Ecol (2007) 1.32
Are readily culturable bacteria in coastal North Sea waters suppressed by selective grazing mortality? Appl Environ Microbiol (2003) 1.31
Identification of unique type II polyketide synthase genes in soil. Appl Environ Microbiol (2005) 1.29
Direct profiling of environmental microbial populations by thermal dissociation analysis of native rRNAs hybridized to oligonucleotide microarrays. Appl Environ Microbiol (2003) 1.29
Diversity and abundance of uncultured cytophaga-like bacteria in the Delaware estuary. Appl Environ Microbiol (2003) 1.24
Sphingomonas alaskensis strain AFO1, an abundant oligotrophic ultramicrobacterium from the North Pacific. Appl Environ Microbiol (2001) 1.23
Fate of heterotrophic microbes in pelagic habitats: focus on populations. Microbiol Mol Biol Rev (2005) 1.18
Photoheterotrophic microbes in the Arctic Ocean in summer and winter. Appl Environ Microbiol (2009) 1.15
Numerical dominance and phylotype diversity of marine Rhodobacter species during early colonization of submerged surfaces in coastal marine waters as determined by 16S ribosomal DNA sequence analysis and fluorescence in situ hybridization. Appl Environ Microbiol (2002) 1.13
Metaproteomic analysis of Chesapeake Bay microbial communities. Saline Systems (2005) 1.13
Phylogenetic diversity of archaea and bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France). Appl Environ Microbiol (2007) 1.12
Novelty and spatio-temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama). Extremophiles (2008) 1.11
Natural communities of novel archaea and bacteria with a string-of-pearls-like morphology: molecular analysis of the bacterial partners. Appl Environ Microbiol (2002) 1.10
Bacterial community structure of biofilms on artificial surfaces in an estuary. Microb Ecol (2006) 1.05
Microbial community composition of the Danshui river estuary of Northern Taiwan and the practicality of the phylogenetic method in microbial barcoding. Microb Ecol (2007) 1.03
Persistence of Streptococcus pyogenes in stationary-phase cultures. J Bacteriol (2005) 1.01
Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California. ISME J (2011) 0.98
Evaluating the flow-cytometric nucleic acid double-staining protocol in realistic situations of planktonic bacterial death. Appl Environ Microbiol (2008) 0.94
Analysis of composition and structure of coastal to mesopelagic bacterioplankton communities in the northern gulf of Mexico. Front Microbiol (2013) 0.92
Verrucomicrobia are candidates for polysaccharide-degrading bacterioplankton in an arctic fjord of Svalbard. Appl Environ Microbiol (2014) 0.92
Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments. Appl Environ Microbiol (2005) 0.92
Spatial variations in microbial community composition in surface seawater from the ultra-oligotrophic center to rim of the South Pacific Gyre. PLoS One (2013) 0.91
Sequence and expression analyses of Cytophaga-like hydrolases in a Western arctic metagenomic library and the Sargasso Sea. Appl Environ Microbiol (2005) 0.90
Marine bacterioplankton diversity and community composition in an antarctic coastal environment. Microb Ecol (2011) 0.89
Bacterial population structure of the jute-retting environment. Microb Ecol (2007) 0.89
Interactive effects of global climate change and pollution on marine microbes: the way ahead. Ecol Evol (2013) 0.89
Emerging strategies and integrated systems microbiology technologies for biodiscovery of marine bioactive compounds. Mar Drugs (2014) 0.87
Planktonic actinobacterial diversity along a salinity gradient of a river and five lakes on the Tibetan Plateau. Extremophiles (2010) 0.83
The diversity of bacterial communities associated with Atlantic cod Gadus morhua. Microb Ecol (2007) 0.81
Determination of whether quorum quenching is a common activity in marine bacteria by analysis of cultivable bacteria and metagenomic sequences. Appl Environ Microbiol (2012) 0.81
Actinobacterial Diversity in the Sediments of Five Cold Springs on the Qinghai-Tibet Plateau. Front Microbiol (2015) 0.81
Increase in Alphaproteobacteria in association with a polychaete, Capitella sp. I, in the organically enriched sediment. ISME J (2011) 0.80
Uptake of dissolved organic carbon by gammaproteobacterial subgroups in coastal waters of the West Antarctic Peninsula. Appl Environ Microbiol (2014) 0.78
Seasonal dynamics and community structure of bacterioplankton in upper Paraná River floodplain. Microb Ecol (2013) 0.78
Detection of 2,4,6-trinitrotoluene-utilizing anaerobic bacteria by 15N and 13C incorporation. Appl Environ Microbiol (2010) 0.78
The near-quantitative sampling of genomic DNA from various food-borne Eubacteria. BMC Microbiol (2014) 0.77
Novel Trypanosomatid-Bacterium Association: Evolution of Endosymbiosis in Action. MBio (2016) 0.77
Diel fluctuations in the abundance and community diversity of coastal bacterioplankton assemblages over a tidal cycle. Microb Ecol (2011) 0.77
Spatial diversity of bacterioplankton communities in surface water of northern South China Sea. PLoS One (2014) 0.77
Spatial patterns of bacterial and archaeal communities along the Romanche Fracture Zone (tropical Atlantic). FEMS Microbiol Ecol (2013) 0.77
Quantifying the metabolic activities of human-associated microbial communities across multiple ecological scales. FEMS Microbiol Rev (2013) 0.76
Preliminary evidence for the organisation of a bacterial community by zooplanktivores at the top of an estuarine planktonic food web. Microb Ecol (2014) 0.76
Impact of pesticide contamination on aquatic microorganism populations in the littoral zone. Arch Environ Contam Toxicol (2012) 0.76
Frankia populations in soil and root nodules of sympatrically grown Alnus taxa. Microb Ecol (2010) 0.76
Diversity of bacterial dimethylsulfoniopropionate degradation genes in surface seawater of Arctic Kongsfjorden. Sci Rep (2016) 0.75
Large scale distribution of bacterial communities in the upper Paraná River floodplain. Braz J Microbiol (2015) 0.75
Bacterial abundance and diversity in pond water supplied with different feeds. Sci Rep (2016) 0.75
Salivary Periodontopathic Bacteria in Children and Adolescents with Down Syndrome. PLoS One (2016) 0.75
The Effect of Increased Loads of Dissolved Organic Matter on Estuarine Microbial Community Composition and Function. Front Microbiol (2017) 0.75
Development of a toolbox to dissect host-endosymbiont interactions and protein trafficking in the trypanosomatid Angomonas deanei. BMC Evol Biol (2016) 0.75
Spongiivirga citrea gen. nov., sp. nov., a new marine bacterium of the family Flavobacteriaceae isolated from a marine sponge. Curr Microbiol (2014) 0.75
Gramella lutea sp. nov., a Novel Species of the Family Flavobacteriaceae Isolated from Marine Sediment. Curr Microbiol (2015) 0.75
Algivirga pacifica gen. nov., sp. nov., a novel agar-degrading marine bacterium of the family Flammeovirgaceae isolated from Micronesia. Curr Microbiol (2013) 0.75
Effect of restriction endonucleases on assessment of biodiversity of cultivable polar marine planktonic bacteria by amplified ribosomal DNA restriction analysis. Extremophiles (2007) 0.75
Basic local alignment search tool. J Mol Biol (1990) 659.07
Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev (1995) 62.96
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol (1990) 34.40
Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells. Science (1989) 24.75
Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol Rev (1997) 21.46
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol (1996) 20.84
Differential amplification of rRNA genes by polymerase chain reaction. Appl Environ Microbiol (1992) 14.96
Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans. Appl Environ Microbiol (1993) 14.89
Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl Environ Microbiol (1995) 11.09
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. Microbiology (1996) 8.59
Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes. Appl Environ Microbiol (1998) 8.48
Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia river, its estuary, and the adjacent coastal ocean. Appl Environ Microbiol (1999) 6.37
Bacterial diversity among small-subunit rRNA gene clones and cellular isolates from the same seawater sample. Appl Environ Microbiol (1997) 6.20
Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol (2000) 6.13
Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization. Appl Environ Microbiol (1999) 5.99
Tangential flow filtration and preliminary phylogenetic analysis of marine picoplankton. Appl Environ Microbiol (1990) 5.98
Culturability and In situ abundance of pelagic bacteria from the North Sea. Appl Environ Microbiol (2000) 5.67
Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity Appl Environ Microbiol (1998) 5.17
Diversity and depth-specific distribution of SAR11 cluster rRNA genes from marine planktonic bacteria. Appl Environ Microbiol (1997) 4.71
Detection of stratified microbial populations related to Chlorobium and Fibrobacter species in the Atlantic and Pacific oceans. Appl Environ Microbiol (1996) 4.64
Determination of Active Marine Bacterioplankton: a Comparison of Universal 16S rRNA Probes, Autoradiography, and Nucleoid Staining. Appl Environ Microbiol (1997) 4.20
Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria. Syst Appl Microbiol (1998) 4.00
Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization. Appl Environ Microbiol (1996) 3.69
Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization. Appl Environ Microbiol (1999) 3.35
Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor. Appl Environ Microbiol (1998) 2.88
Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation. Appl Environ Microbiol (2000) 2.57
Identification in situ and dynamics of bacteria on limnetic organic aggregates (lake snow). Appl Environ Microbiol (1996) 2.20
Small ribosomal RNA content in marine Proteobacteria during non-steady-state growth. FEMS Microbiol Ecol (1999) 1.88
Molecular Identification and Localization of Filamentous Symbiotic Bacteria Associated with the Hydrothermal Vent Annelid Alvinella pompejana. Appl Environ Microbiol (1997) 1.82
Structure and function of the methanogenic archaeal community in stable cellulose-degrading enrichment cultures at two different temperatures (15 and 30 degrees C). FEMS Microbiol Ecol (1999) 1.61
Molecular characterization of a toluene-degrading methanogenic consortium. Appl Environ Microbiol (1999) 1.27
Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter. Appl Environ Microbiol (2000) 6.13
Production and vertical flux of attached bacteria in the hudson river plume of the new york bight as studied with floating sediment traps. Appl Environ Microbiol (1982) 2.01
Chitinases from uncultured marine microorganisms. Appl Environ Microbiol (1999) 1.67
Estimating bacterial production in marine waters from the simultaneous incorporation of thymidine and leucine. Appl Environ Microbiol (1988) 1.59
Attachment stimulates exopolysaccharide synthesis by a bacterium. Appl Environ Microbiol (1993) 1.58
Depth distribution of bacterial production in a stratified lake with an anoxic hypolimnion. Appl Environ Microbiol (1986) 1.50
Selected chitinase genes in cultured and uncultured marine bacteria in the alpha- and gamma-subclasses of the proteobacteria. Appl Environ Microbiol (2000) 1.41
Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana. Appl Environ Microbiol (1999) 1.35
A chitin-binding domain in a marine bacterial chitinase and other microbial chitinases: implications for the ecology and evolution of 1,4-beta-glycanases. Microbiology (1998) 1.33
Role of Chitin-Binding Proteins in the Specific Attachment of the Marine Bacterium Vibrio harveyi to Chitin. Appl Environ Microbiol (1993) 1.31
Chitin Degradation Proteins Produced by the Marine Bacterium Vibrio harveyi Growing on Different Forms of Chitin. Appl Environ Microbiol (1997) 1.25
Induction of Chitin-Binding Proteins during the Specific Attachment of the Marine Bacterium Vibrio harveyi to Chitin. Appl Environ Microbiol (1994) 1.21
Bacterioplankton cell growth and macromolecular synthesis in seawater cultures during the North Atlantic Spring Phytoplankton Bloom, May, 1989. Microb Ecol (1992) 1.04
Bacterial hydrolysis of protein and methylated protein and its implications for studies of protein degradation in aquatic systems. Appl Environ Microbiol (1992) 1.02
Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study. Environ Microbiol (2013) 1.00
Degradation of adsorbed protein by attached bacteria in relationship to surface hydrophobicity. Appl Environ Microbiol (1990) 1.00
Enhanced dissolution of silicate minerals by bacteria at near-neutral pH. Microb Ecol (1994) 0.99
Abundance and single-cell activity of heterotrophic bacterial groups in the western Arctic Ocean in summer and winter. Appl Environ Microbiol (2012) 0.93
Ribulose Bisphosphate Carboxylase from Three Chlorophyll c-Containing Algae : Physical and Immunological Characterizations. Plant Physiol (1986) 0.92
Bacteria in biofilms are living an unnatural life. Nature (2001) 0.75