Chloromethane utilization gene cluster from Hyphomicrobium chloromethanicum strain CM2(T) and development of functional gene probes to detect halomethane-degrading bacteria.

PubWeight™: 1.04‹?› | Rank: Top 15%

🔗 View Article (PMC 92571)

Published in Appl Environ Microbiol on January 01, 2001

Authors

C McAnulla1, C A Woodall, I R McDonald, A Studer, S Vuilleumier, T Leisinger, J C Murrell

Author Affiliations

1: Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, England.

Articles citing this

Chloromethane-induced genes define a third C1 utilization pathway in Methylobacterium chloromethanicum CM4. J Bacteriol (2002) 1.08

Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis. BMC Genomics (2007) 1.06

Consumption of tropospheric levels of methyl bromide by C(1) compound-utilizing bacteria and comparison to saturation kinetics. Appl Environ Microbiol (2001) 0.98

Identification of methyl halide-utilizing genes in the methyl bromide-utilizing bacterial strain IMB-1 suggests a high degree of conservation of methyl halide-specific genes in gram-negative bacteria. Appl Environ Microbiol (2001) 0.90

Biodegradation of chloromethane by Pseudomonas aeruginosa strain NB1 under nitrate-reducing and aerobic conditions. Appl Environ Microbiol (2004) 0.84

Hydrogen and carbon isotope fractionation during degradation of chloromethane by methylotrophic bacteria. Microbiologyopen (2013) 0.80

Chloromethane-dependent expression of the cmu gene cluster of Hyphomicrobium chloromethanicum. Appl Environ Microbiol (2004) 0.79

Fluorescence-based bacterial bioreporter for specific detection of methyl halide emissions in the environment. Appl Environ Microbiol (2013) 0.78

Rapid quantitative estimation of chlorinated methane utilizing bacteria in drinking water and the effect of nanosilver on biodegradation of the trichloromethane in the environment. Jundishapur J Microbiol (2015) 0.75

A metagenomic-based survey of microbial (de)halogenation potential in a German forest soil. Sci Rep (2016) 0.75

Transfer of a Catabolic Pathway for Chloromethane in Methylobacterium Strains Highlights Different Limitations for Growth with Chloromethane or with Dichloromethane. Front Microbiol (2016) 0.75

Articles cited by this

Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (1970) 1528.65

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

Enrichment, isolation and some properties of methane-utilizing bacteria. J Gen Microbiol (1970) 12.48

Zinc coordination, function, and structure of zinc enzymes and other proteins. Biochemistry (1990) 6.41

Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res (1998) 5.70

How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase. Science (1994) 3.93

Purification and characterization of hydrolytic haloalkane dehalogenase from Xanthobacter autotrophicus GJ10. J Bacteriol (1985) 3.37

Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation. Science (1997) 2.63

Detection of methanotrophic bacteria in environmental samples with the PCR. Appl Environ Microbiol (1995) 2.37

Structure-based perspectives on B12-dependent enzymes. Annu Rev Biochem (1997) 2.36

Properties of the methane mono-oxygenase from extracts of Methylosinus trichosporium OB3b and evidence for its similarity to the enzyme from Methylococcus capsulatus (Bath). Eur J Biochem (1979) 2.16

Biodegradation of Halogenated Hydrocarbon Fumigants by Nitrifying Bacteria. Appl Environ Microbiol (1990) 1.79

Bacterial oxidation of methyl bromide in fumigated agricultural soils. Appl Environ Microbiol (1997) 1.53

The nucleotide sequence of the Tn5271 3-chlorobenzoate 3,4-dioxygenase genes (cbaAB) unites the class IA oxygenases in a single lineage. Microbiology (1995) 1.53

Bacterial yields on methanol, methylamine, formaldehyde, and formate. Biotechnol Bioeng (1976) 1.48

Identification of the zinc ligands in cobalamin-independent methionine synthase (MetE) from Escherichia coli. Biochemistry (1999) 1.35

Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12. J Bacteriol (1997) 1.28

A corrinoid-dependent catabolic pathway for growth of a Methylobacterium strain with chloromethane. Proc Natl Acad Sci U S A (1999) 1.26

Clustered genes encoding the methyltransferases of methanogenesis from monomethylamine. J Bacteriol (1998) 1.26

Strain IMB-1, a novel bacterium for the removal of methyl bromide in fumigated agricultural soils. Appl Environ Microbiol (1998) 1.24

Chloromethane Metabolism by Methylobacterium sp. Strain CM4 Appl Environ Microbiol (1998) 1.23

Methylcobalamin: coenzyme M methyltransferase isoenzymes MtaA and MtbA from Methanosarcina barkeri. Cloning, sequencing and differential transcription of the encoding genes, and functional overexpression of the mtaA gene in Escherichia coli. Eur J Biochem (1996) 1.21

Nucleotide sequences and regulational analysis of genes involved in conversion of aniline to catechol in Pseudomonas putida UCC22(pTDN1). J Bacteriol (1997) 1.20

Anaerobic dehalogenases. Curr Opin Biotechnol (1997) 1.18

On the mechanism of inhibition of methanol dehydrogenase by cyclopropane-derived inhibitors. Eur J Biochem (1989) 1.16

Natural methyl bromide and methyl chloride emissions from coastal salt marshes. Nature (2000) 1.14

Halomethane:bisulfide/halide ion methyltransferase, an unusual corrinoid enzyme of environmental significance isolated from an aerobic methylotroph using chloromethane as the sole carbon source. Appl Environ Microbiol (1999) 1.09

Methylcobamide:coenzyme M methyltransferase isozymes from Methanosarcina barkeri. Physicochemical characterization, cloning, sequence analysis, and heterologous gene expression. J Biol Chem (1996) 1.08

Bacterial oxidation of dibromomethane and methyl bromide in natural waters and enrichment cultures Appl Environ Microbiol (1998) 1.06

The energy conserving N5-methyltetrahydromethanopterin:coenzyme M methyltransferase complex from Methanobacterium thermoautotrophicum is composed of eight different subunits. Eur J Biochem (1995) 1.05

Purification and properties of N5-methyltetrahydromethanopterin:coenzyme M methyltransferase from Methanobacterium thermoautotrophicum. Eur J Biochem (1993) 1.03

Hyphomicrobium chloromethanicum sp. nov. and Methylobacterium chloromethanicum sp. nov., chloromethane-utilizing bacteria isolated from a polluted environment. Int J Syst Evol Microbiol (2001) 1.02

Properties of the methylcobalamin:H4folate methyltransferase involved in chloromethane utilization by Methylobacterium sp. strain CM4. Eur J Biochem (1999) 1.02

Methylthiol:coenzyme M methyltransferase from Methanosarcina barkeri, an enzyme of methanogenesis from dimethylsulfide and methylmercaptopropionate. J Bacteriol (1997) 1.02

Oxidation of methyl halides by the facultative methylotroph strain IMB-1. Appl Environ Microbiol (1999) 1.00

The energy conserving methyltetrahydromethanopterin:coenzyme M methyltransferase complex from methanogenic archaea: function of the subunit MtrH. FEBS Lett (1999) 0.97

Riboflavin synthesis genes are linked with the lux operon of Photobacterium phosphoreum. J Bacteriol (1994) 0.96

Coenzyme M methylase activity of the 480-kilodalton corrinoid protein from Methanosarcina barkeri. J Bacteriol (1996) 0.96

Description of Pseudaminobacter gen. nov. with two new species, Pseudaminobacter salicylatoxidans sp. nov. and Pseudaminobacter defluvii sp. nov. Int J Syst Bacteriol (1999) 0.91

Better budgets for methyl halides? Nature (2000) 0.88

Molecular characterisation of formamidase from Methylophilus methylotrophus. Eur J Biochem (1996) 0.86

Articles by these authors

Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. FEMS Microbiol Lett (1995) 5.04

Stable-isotope probing as a tool in microbial ecology. Nature (2000) 4.67

The genetic organization of arginine biosynthesis in Pseudomonas aeruginosa. Mol Gen Genet (1977) 4.07

Secondary metabolites of the fluorescent pseudomonads. Microbiol Rev (1979) 3.07

Bacterial growth on 1,2-dichloroethane. Experientia (1983) 2.74

Particulate methane monooxygenase genes in methanotrophs. J Bacteriol (1995) 2.63

Transformation of tetrachloromethane to dichloromethane and carbon dioxide by Acetobacterium woodii. Appl Environ Microbiol (1988) 2.61

Genetic and molecular characterization of the Pseudomonas plasmid pVS1. Plasmid (1984) 2.44

Detection of methanotrophic bacteria in environmental samples with the PCR. Appl Environ Microbiol (1995) 2.37

Bacterial degradation of dichloromethane. Appl Environ Microbiol (1980) 2.36

Sequence analysis and expression of the bacterial dichloromethane dehalogenase structural gene, a member of the glutathione S-transferase supergene family. J Bacteriol (1990) 2.34

Characterization of methanotrophic bacterial populations in soils showing atmospheric methane uptake. Appl Environ Microbiol (1999) 2.30

Properties of purified Orange II azoreductase, the enzyme initiating azo dye degradation by Pseudomonas KF46. Eur J Biochem (1982) 2.18

A plasmid in the archaebacterium Methanobacterium thermoautotrophicum. Mol Gen Genet (1983) 2.15

Dichloromethane dehalogenase of Hyphomicrobium sp. strain DM2. J Bacteriol (1985) 2.00

Detection of novel marine methanotrophs using phylogenetic and functional gene probes after methane enrichment. Microbiology (1995) 1.98

Molecular analysis of the methane monooxygenase (MMO) gene cluster of Methylosinus trichosporium OB3b. Mol Microbiol (1991) 1.94

Characterization of a two-component alkanesulfonate monooxygenase from Escherichia coli. J Biol Chem (1999) 1.92

The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Appl Environ Microbiol (1997) 1.88

Characterization of alpha-ketoglutarate-dependent taurine dioxygenase from Escherichia coli. J Biol Chem (1997) 1.88

The methane monooxygenase gene cluster of Methylococcus capsulatus (Bath). Gene (1990) 1.81

Acute and chronic effects of the angiotensin-converting enzyme inhibitor captopril in severe hypertension. Am J Cardiol (1982) 1.77

Microbial desulfonation of substituted naphthalenesulfonic acids and benzenesulfonic acids. Appl Environ Microbiol (1987) 1.75

The particulate methane monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs. FEMS Microbiol Lett (1997) 1.74

Microorganisms and xenobiotic compounds. Experientia (1983) 1.74

Carotid dissection with and without ischemic events: local symptoms and cerebral artery findings. Neurology (2001) 1.71

The gene-enzyme relationships of proline biosynthesis in Escherichia coli. J Gen Microbiol (1980) 1.68

Characterization of 1-chlorohexane halidohydrolase, a dehalogenase of wide substrate range from an Arthrobacter sp. J Bacteriol (1987) 1.65

Towards a comprehensive simulation model of malaria epidemiology and control. Parasitology (2008) 1.65

4-Sulphobenzoate 3,4-dioxygenase. Purification and properties of a desulphonative two-component enzyme system from Comamonas testosteroni T-2. Biochem J (1991) 1.64

An electron microscopic study of platelet thrombus formation in the rabbit with particular regard to 5-hydroxytryptamine release. Thromb Diath Haemorrh (1967) 1.61

Dual role for N-2-acetylornithine 5-aminotransferase from Pseudomonas aeruginosa in arginine biosynthesis and arginine catabolism. J Bacteriol (1975) 1.60

Identification of sulfate starvation-regulated genes in Escherichia coli: a gene cluster involved in the utilization of taurine as a sulfur source. J Bacteriol (1996) 1.59

Molecular analysis of Methanobacterium phage psiM2. Mol Microbiol (1998) 1.54

Comparison of pmoA PCR primer sets as tools for investigating methanotroph diversity in three Danish soils. Appl Environ Microbiol (2001) 1.53

Regulation of expression of methane monooxygenases by copper ions. Trends Microbiol (2000) 1.52

N-acetylglutamate synthase of Escherichia coli: purification, characterization, and molecular properties. J Biol Chem (1977) 1.52

Bacillus subtilis genes for the utilization of sulfur from aliphatic sulfonates. Microbiology (1998) 1.50

Copper-dependent reciprocal transcriptional regulation of methane monooxygenase genes in Methylococcus capsulatus and Methylosinus trichosporium. Mol Microbiol (1997) 1.49

Isoleucyl-tRNA synthetase of Methanobacterium thermoautotrophicum Marburg. Cloning of the gene, nucleotide sequence, and localization of a base change conferring resistance to pseudomonic acid. J Biol Chem (1991) 1.48

Molecular biology and regulation of methane monooxygenase. Arch Microbiol (2000) 1.44

Methylosulfonomonas methylovora gen. nov., sp. nov., and Marinosulfonomonas methylotropha gen. nov., sp. nov.: novel methylotrophs able to grow on methanesulfonic acid. Arch Microbiol (1997) 1.43

The Escherichia coli ssuEADCB gene cluster is required for the utilization of sulfur from aliphatic sulfonates and is regulated by the transcriptional activator Cbl. J Biol Chem (1999) 1.41

Purification and use of Methanobacterium wolfei pseudomurein endopeptidase for lysis of Methanobacterium thermoautotrophicum. J Bacteriol (1987) 1.40

N-acetylglutamate synthetase of Pseudomonas aeruginosa. An assay in vitro and feedback inhibition by arginine. Eur J Biochem (1972) 1.38

Sagittal rotational malunions of the distal radius: the role of pure derotational osteotomy. J Hand Surg Eur Vol (2009) 1.38

Role of 4-aminobutyrate aminotransferase in the arginine metabolism of Pseudomonas aeruginosa. J Bacteriol (1976) 1.38

Analysis of 16S rRNA and methane monooxygenase gene sequences reveals a novel group of thermotolerant and thermophilic methanotrophs, Methylocaldum gen. nov. Arch Microbiol (1997) 1.37

Dichloromethane dehalogenase with improved catalytic activity isolated from a fast-growing dichloromethane-utilizing bacterium. J Bacteriol (1988) 1.36

N-Acetylglutamate synthase of Escherichia coli regulation of synthesis and activity by arginine. J Biol Chem (1975) 1.34

Identification of a transcript and its promoter region on the archaebacterial plasmid pME2001. J Bacteriol (1988) 1.34

Involvement of CysB and Cbl regulatory proteins in expression of the tauABCD operon and other sulfate starvation-inducible genes in Escherichia coli. J Bacteriol (1997) 1.33

Degradation of p-toluenesulphonic acid via sidechain oxidation, desulphonation and meta ring cleavage in Pseudomonas (Comamonas) testosteroni T-2. J Gen Microbiol (1989) 1.33

Isolation of an Hfr donor of Pseudomonas aeruginosa PAO by insertion of the plasmid RP1 into the tryptophan synthase gene. Mol Gen Genet (1981) 1.32

Expression of biosynthetic genes from Pseudomonas aeruginosa and Escherichia coli in the heterologous host. Mol Gen Genet (1986) 1.32

Comparison of two bacterial azoreductases acquired during adaptation to growth on azo dyes. Arch Microbiol (1984) 1.31

Sulfonate-sulfur metabolism and its regulation in Escherichia coli. Arch Microbiol (2001) 1.30

A comparison of the pH, urea, and temperature-denatured states of barnase by heteronuclear NMR: implications for the initiation of protein folding. J Mol Biol (1995) 1.30

Importance of two buried salt bridges in the stability and folding pathway of barnase. Biochemistry (1996) 1.28

A corrinoid-dependent catabolic pathway for growth of a Methylobacterium strain with chloromethane. Proc Natl Acad Sci U S A (1999) 1.26

Tryptophan gene cluster of Methanobacterium thermoautotrophicum Marburg: molecular cloning and nucleotide sequence of a putative trpEGCFBAD operon. J Bacteriol (1991) 1.25

Molecular analysis of the pmo (particulate methane monooxygenase) operons from two type II methanotrophs. Appl Environ Microbiol (2000) 1.25

Mechanism of ischemic infarct in spontaneous carotid dissection. Stroke (2004) 1.25

Highly efficient methane biocatalysis revealed in a methanotrophic bacterium. Nat Commun (2013) 1.23

Long-term experience with captopril in severe hypertension. Br J Clin Pharmacol (1982) 1.23

Purification and characterization of the arylsulfatase synthesized by Pseudomonas aeruginosa PAO during growth in sulfate-free medium and cloning of the arylsulfatase gene (atsA). Eur J Biochem (1995) 1.22

Molecular analysis of the sulfate reducing and archaeal community in a meromictic soda lake (Mono Lake, California) by targeting 16S rRNA, mcrA, apsA, and dsrAB genes. Microb Ecol (2005) 1.20

[Effects of vascular catheterization in normo- and hypercholesteremic rabbits]. Pathol Microbiol (Basel) (1966) 1.20

Thermodynamic study of the acid denaturation of barnase and its dependence on ionic strength: evidence for residual electrostatic interactions in the acid/thermally denatured state. Biochemistry (1994) 1.20

Isolation of an anaerobic bacterium which reductively dechlorinates tetrachloroethene and trichloroethene. Biodegradation (1997) 1.19

4-Toluene sulfonate methyl-monooxygenase from Comamonas testosteroni T-2: purification and some properties of the oxygenase component. J Bacteriol (1991) 1.18

The soluble methane monooxygenase gene cluster of the trichloroethylene-degrading methanotroph Methylocystis sp. strain M. Appl Environ Microbiol (1997) 1.18

N-Succinylated intermediates in an arginine catabolic pathway of Pseudomonas aeruginosa. Proc Natl Acad Sci U S A (1986) 1.18

Proteins induced by sulfate limitation in Escherichia coli, Pseudomonas putida, or Staphylococcus aureus. J Bacteriol (1993) 1.17

Transduction in the archaebacterium Methanobacterium thermoautotrophicum Marburg. J Bacteriol (1990) 1.16

Significance of fixation procedure for preservation of arteries. Experientia (1972) 1.16

3-Sulphocatechol 2,3-dioxygenase and other dioxygenases (EC 1.13.11.2 and EC 1.14.12.-) in the degradative pathways of 2-aminobenzenesulphonic, benzenesulphonic and 4-toluenesulphonic acids in Alcaligenes sp. strain O-1. Microbiology (1994) 1.16

Molecular analysis of methane monooxygenase from Methylococcus capsulatus (Bath). Arch Microbiol (1989) 1.16

Anabolic ornithine carbamoyltransferase of Pseudomonas aeruginosa: nucleotide sequence and transcriptional control of the argF structural gene. J Bacteriol (1988) 1.16

Plasmid analysis and cloning of the dichloromethane-utilization genes of Methylobacterium sp. DM4. J Gen Microbiol (1988) 1.15

Regulation of the sulfate starvation response in Pseudomonas aeruginosa: role of cysteine biosynthetic intermediates. Microbiology (1998) 1.13

Oxygenation and spontaneous deamination of 2-aminobenzenesulphonic acid in Alcaligenes sp. strain O-1 with subsequent meta ring cleavage and spontaneous desulphonation to 2-hydroxymuconic acid. Biochem J (1994) 1.13

Isolation and characterization of the Methylophilus sp. strain DM11 gene encoding dichloromethane dehalogenase/glutathione S-transferase. J Bacteriol (1994) 1.13

The methane monooxygenase gene cluster of Methylosinus trichosporium: cloning and sequencing of the mmoC gene. Arch Microbiol (1991) 1.12

Isolation and characterization of methanesulfonic Acid-degrading bacteria from the marine environment. Appl Environ Microbiol (1995) 1.12

Recanalisation of cerebral venous thrombosis. J Neurol Neurosurg Psychiatry (2003) 1.11

The genome of archaeal prophage PsiM100 encodes the lytic enzyme responsible for autolysis of Methanothermobacter wolfeii. J Bacteriol (2001) 1.11

Physical map of the Methanobacterium thermoautotrophicum Marburg chromosome. J Bacteriol (1992) 1.11

Bacterial oxidation of propane. FEMS Microbiol Lett (1994) 1.10

Expression of the Bacillus subtilis sulphonate-sulphur utilization genes is regulated at the levels of transcription initiation and termination. Mol Microbiol (2001) 1.10

Vascularised corticoperiosteal grafts from the medial femoral condyle for difficult non-unions of the upper limb. J Hand Surg Eur Vol (2007) 1.10

A review of bacterial methyl halide degradation: biochemistry, genetics and molecular ecology. Environ Microbiol (2002) 1.10

A family of flavoproteins in the domains Archaea and Bacteria. Eur J Biochem (1998) 1.09

Acetogenesis from dichloromethane by a two-component mixed culture comprising a novel bacterium. Appl Environ Microbiol (1995) 1.08