Published in Methods Mol Biol on January 01, 2002
Lessons in stability from thermophilic proteins. Protein Sci (2006) 1.88
Release factors 2 from Escherichia coli and Thermus thermophilus: structural, spectroscopic and microcalorimetric studies. Nucleic Acids Res (2007) 1.09
Changes in thermodynamic stability of von Willebrand factor differentially affect the force-dependent binding to platelet GPIbalpha. Biophys J (2009) 1.07
Protein Homeostasis Imposes a Barrier on Functional Integration of Horizontally Transferred Genes in Bacteria. PLoS Genet (2015) 0.83
Exploring the Balance between DNA Pressure and Capsid Stability in Herpesviruses and Phages. J Virol (2015) 0.82
Thermodynamics of Membrane Insertion and Refolding of the Diphtheria Toxin T-Domain. J Membr Biol (2014) 0.81
Thermal stabilization of dihydrofolate reductase using monte carlo unfolding simulations and its functional consequences. PLoS Comput Biol (2015) 0.81
Noncharged amino acid residues at the solvent-exposed positions in the middle and at the C terminus of the alpha-helix have the same helical propensity. Protein Sci (2003) 0.78
NMR investigations on residue level unfolding thermodynamics in DLC8 dimer by temperature dependent native state hydrogen exchange. J Biomol NMR (2009) 0.76
Evidence for the principle of minimal frustration in the evolution of protein folding landscapes. Proc Natl Acad Sci U S A (2017) 0.75
Protein stability and surface electrostatics: a charged relationship. Biochemistry (2006) 1.70
Dissecting the energetics of protein alpha-helix C-cap termination through chemical protein synthesis. Nat Chem Biol (2006) 1.68
The enthalpy of the alanine peptide helix measured by isothermal titration calorimetry using metal-binding to induce helix formation. Proc Natl Acad Sci U S A (2002) 1.47
Rational stabilization of enzymes by computational redesign of surface charge-charge interactions. Proc Natl Acad Sci U S A (2009) 1.27
Unfolding thermodynamics of Trp-cage, a 20 residue miniprotein, studied by differential scanning calorimetry and circular dichroism spectroscopy. Biochemistry (2007) 1.24
Enthalpy of helix-coil transition: missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues. Proc Natl Acad Sci U S A (2005) 1.11
Temperature dependence of the thermodynamics of helix-coil transition. J Mol Biol (2004) 1.10
Mechanism of fibril formation by a 39-residue peptide (PAPf39) from human prostatic acidic phosphatase. Biochemistry (2009) 1.09
Thermodynamic consequences of burial of polar and non-polar amino acid residues in the protein interior. J Mol Biol (2002) 1.08
Removal of surface charge-charge interactions from ubiquitin leaves the protein folded and very stable. Protein Sci (2002) 1.06
Role of the charge-charge interactions in defining stability and halophilicity of the CspB proteins. J Mol Biol (2006) 1.02
Computational design of the Fyn SH3 domain with increased stability through optimization of surface charge charge interactions. Protein Sci (2007) 1.01
Total chemical synthesis and X-ray crystal structure of a protein diastereomer: [D-Gln 35]ubiquitin. Angew Chem Int Ed Engl (2005) 0.99
Thermodynamics of the Trp-cage miniprotein unfolding in urea. Proteins (2010) 0.96
Structural basis for putrescine activation of human S-adenosylmethionine decarboxylase. Biochemistry (2008) 0.95
Protein stabilization by the rational design of surface charge-charge interactions. Methods Mol Biol (2009) 0.94
Molecular mechanism for the preferential exclusion of TMAO from protein surfaces. J Phys Chem B (2012) 0.93
Core sequence of PAPf39 amyloid fibrils and mechanism of pH-dependent fibril formation: the role of monomer conformation. Biochemistry (2012) 0.92
Cooperativity of complex salt bridges. Protein Sci (2008) 0.91
How to improve nature: study of the electrostatic properties of the surface of alpha-lactalbumin. Protein Eng Des Sel (2005) 0.90
Conformational and thermodynamic properties of peptide binding to the human S100P protein. Protein Sci (2002) 0.89
Conformational dynamics and structural plasticity play critical roles in the ubiquitin recognition of a UIM domain. J Mol Biol (2010) 0.89
Effects of charge-to-alanine substitutions on the stability of ribosomal protein L30e from Thermococcus celer. Biochemistry (2005) 0.88
Calorimetric evidence for a two-state unfolding of the beta-hairpin peptide trpzip4. J Am Chem Soc (2006) 0.88
Statistical analysis of protein structures suggests that buried ionizable residues in proteins are hydrogen bonded or form salt bridges. Proteins (2011) 0.87
Annexin I and annexin II N-terminal peptides binding to S100 protein family members: specificity and thermodynamic characterization. Biochemistry (2009) 0.87
Isothermal titration calorimetry. Methods Mol Biol (2002) 0.87
The role and specificity of the catalytic and regulatory cation-binding sites of the Na+-pumping NADH:quinone oxidoreductase from Vibrio cholerae. J Biol Chem (2011) 0.87
Universal convergence of the specific volume changes of globular proteins upon unfolding. Biochemistry (2009) 0.87
A computational approach for the rational design of stable proteins and enzymes: optimization of surface charge-charge interactions. Methods Enzymol (2009) 0.86
Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction. Proc Natl Acad Sci U S A (2012) 0.86
Kinetic consequences of native state optimization of surface-exposed electrostatic interactions in the Fyn SH3 domain. Proteins (2011) 0.85
Pressure perturbation calorimetry of unfolded proteins. J Phys Chem B (2010) 0.84
Protonation/deprotonation effects on the stability of the Trp-cage miniprotein. Phys Chem Chem Phys (2011) 0.84
Hydrophobic interactions at the Ccap position of the C-capping motif of alpha-helices. J Mol Biol (2002) 0.83
Modulation of quaternary structure of S100 proteins by calcium ions. Biophys Chem (2010) 0.82
Elimination of the C-cap in ubiquitin - structure, dynamics and thermodynamic consequences. Biophys Chem (2006) 0.82
Energetics of charge-charge interactions between residues adjacent in sequence. Proteins (2011) 0.82
Enzyme activity in the crowded milieu. PLoS One (2012) 0.82
Experimental test of the thermodynamic model of protein cooperativity using temperature-induced unfolding of a Ubq-UIM fusion protein. Biochemistry (2010) 0.81
Investigation of protein binding affinity in multimodal chromatographic systems using a homologous protein library. J Chromatogr A (2009) 0.80
NMR structure of the Apo-S100P protein. J Biomol NMR (2004) 0.80
Structural characterization of semen coagulum-derived SEM1(86-107) amyloid fibrils that enhance HIV-1 infection. Biochemistry (2014) 0.79
Investigation of protein binding affinity and preferred orientations in ion exchange systems using a homologous protein library. Biotechnol Bioeng (2009) 0.79
Electrostatic contribution of surface charge residues to the stability of a thermophilic protein: benchmarking experimental and predicted pKa values. PLoS One (2012) 0.79
Bacterial expression and purification of the amyloidogenic peptide PAPf39 for multidimensional NMR spectroscopy. Protein Expr Purif (2013) 0.78
Use of pressure perturbation calorimetry to characterize the volumetric properties of proteins. Methods Enzymol (2009) 0.78
Backtracking due to residual structure in the unfolded state changes the folding of the third fibronectin type III domain from tenascin-C. J Phys Chem B (2013) 0.78
Noncharged amino acid residues at the solvent-exposed positions in the middle and at the C terminus of the alpha-helix have the same helical propensity. Protein Sci (2003) 0.78
The role of cross-chain ionic interactions for the stability of collagen model peptides. Biophys J (2013) 0.77
Thermodynamic and kinetic analysis of peptides derived from CapZ, NDR, p53, HDM2, and HDM4 binding to human S100B. Biochemistry (2012) 0.77
Novel interactions of the TRTK12 peptide with S100 protein family members: specificity and thermodynamic characterization. Biochemistry (2013) 0.77
Equilibrium and kinetic studies of protein cooperativity using urea-induced folding/unfolding of a Ubq-UIM fusion protein. Biophys Chem (2011) 0.77
Molecular determinants of expansivity of native globular proteins: a pressure perturbation calorimetry study. J Phys Chem B (2014) 0.77
Amino acid substitutions affecting protein dynamics in eglin C do not affect heat capacity change upon unfolding. Proteins (2006) 0.77
Structural and thermodynamic characterization of the recognition of the S100-binding peptides TRTK12 and p53 by calmodulin. Protein Sci (2014) 0.75
Both helical propensity and side-chain hydrophobicity at a partially exposed site in alpha-helix contribute to the thermodynamic stability of ubiquitin. Proteins (2005) 0.75
Advances in the analysis of conformational transitions in peptides using differential scanning calorimetry. Methods Mol Biol (2007) 0.75
Molecular Determinants of Temperature Dependence of Protein Volume Change upon Unfolding. J Phys Chem B (2017) 0.75
Alterations of Nonconserved Residues Affect Protein Stability and Folding Dynamics through Charge-Charge Interactions. J Phys Chem B (2015) 0.75