Published in Genes Cells on August 01, 2002
Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli. Science (2008) 2.66
Transcription termination by nuclear RNA polymerases. Genes Dev (2009) 2.65
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription. Mol Cell (2012) 2.57
Applied force reveals mechanistic and energetic details of transcription termination. Cell (2008) 2.45
Single-molecule studies of RNA polymerase: motoring along. Annu Rev Biochem (2008) 1.80
RNA polymerase elongation factors. Annu Rev Microbiol (2008) 1.73
Thermodynamic and kinetic modeling of transcriptional pausing. Proc Natl Acad Sci U S A (2006) 1.61
Binding and translocation of termination factor rho studied at the single-molecule level. J Mol Biol (2012) 1.58
The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest. Mol Syst Biol (2008) 1.56
Role of DNA bubble rewinding in enzymatic transcription termination. Proc Natl Acad Sci U S A (2006) 1.52
Rho-dependent transcription termination: more questions than answers. J Microbiol (2006) 1.50
Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination. Proc Natl Acad Sci U S A (2008) 1.41
Molecular dissection of mammalian RNA polymerase II transcriptional termination. Mol Cell (2008) 1.36
A transcription antiterminator constructs a NusA-dependent shield to the emerging transcript. Mol Cell (2007) 1.29
In vivo effect of NusB and NusG on rRNA transcription antitermination. J Bacteriol (2004) 1.26
Mechanisms and evolution of control logic in prokaryotic transcriptional regulation. Microbiol Mol Biol Rev (2009) 1.25
Gene expression patterns associated with the biosynthesis of the sunscreen scytonemin in Nostoc punctiforme ATCC 29133 in response to UVA radiation. J Bacteriol (2009) 1.25
G-quadruplex structures in RNA stimulate mitochondrial transcription termination and primer formation. Proc Natl Acad Sci U S A (2010) 1.21
Archaeal intrinsic transcription termination in vivo. J Bacteriol (2009) 1.15
What happens when replication and transcription complexes collide? Cell Cycle (2010) 1.14
Anthrose biosynthetic operon of Bacillus anthracis. J Bacteriol (2008) 1.14
Polarity in archaeal operon transcription in Thermococcus kodakaraensis. J Bacteriol (2008) 1.11
Torpedo nuclease Rat1 is insufficient to terminate RNA polymerase II in vitro. J Biol Chem (2009) 1.05
A role for Rho-dependent polarity in gene regulation by a noncoding small RNA. Genes Dev (2012) 1.05
Transcription start site associated RNAs in bacteria. Mol Syst Biol (2012) 1.04
Phase-locked mutants of Mycoplasma agalactiae: defining the molecular switch of high-frequency Vpma antigenic variation. Mol Microbiol (2008) 1.03
Highly divergent RfaH orthologs from pathogenic proteobacteria can substitute for Escherichia coli RfaH both in vivo and in vitro. J Bacteriol (2004) 1.02
Characterization of a heme-regulated non-coding RNA encoded by the prrF locus of Pseudomonas aeruginosa. PLoS One (2010) 0.99
NusA interaction with the α subunit of E. coli RNA polymerase is via the UP element site and releases autoinhibition. Structure (2011) 0.99
RNA-binding specificity of E. coli NusA. Nucleic Acids Res (2009) 0.97
Post-transcriptional processing of the LEE4 operon in enterohaemorrhagic Escherichia coli. Mol Microbiol (2008) 0.96
Expression of the bmpB gene of Borrelia burgdorferi is modulated by two distinct transcription termination events. J Bacteriol (2005) 0.96
Structural basis for the interaction of Escherichia coli NusA with protein N of phage lambda. Proc Natl Acad Sci U S A (2004) 0.94
Crystallization of the archaeal transcription termination factor NusA: a significant decrease in twinning under microgravity conditions. Acta Crystallogr Sect F Struct Biol Cryst Commun (2007) 0.93
Transcription of the pst operon of Clostridium acetobutylicum is dependent on phosphate concentration and pH. J Bacteriol (2006) 0.92
The role of E. coli Nus-factors in transcription regulation and transcription:translation coupling: From structure to mechanism. Transcription (2011) 0.91
Single-molecule studies of transcription: from one RNA polymerase at a time to the gene expression profile of a cell. J Mol Biol (2011) 0.91
Modulation of Rho-dependent transcription termination in Escherichia coli by the H-NS family of proteins. J Bacteriol (2011) 0.90
The E. coli NusA carboxy-terminal domains are structurally similar and show specific RNAP- and lambdaN interaction. Protein Sci (2005) 0.90
Engineering modular 'ON' RNA switches using biological components. Nucleic Acids Res (2013) 0.89
Regulation of transcription elongation and termination. Biomolecules (2015) 0.89
The presence of an RNA:DNA hybrid that is prone to slippage promotes termination by T7 RNA polymerase. J Mol Biol (2014) 0.87
Little lambda, who made thee? Microbiol Mol Biol Rev (2004) 0.86
Genomic analysis of the role of RNase R in the turnover of Pseudomonas putida mRNAs. J Bacteriol (2008) 0.86
Cutoff Suppresses RNA Polymerase II Termination to Ensure Expression of piRNA Precursors. Mol Cell (2016) 0.86
Rethinking transcription coupled DNA repair. Curr Opin Microbiol (2015) 0.86
Imprecise transcription termination within Escherichia coli greA leader gives rise to an array of short transcripts, GraL. Nucleic Acids Res (2009) 0.85
Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins. J Bacteriol (2011) 0.84
Compensating the Fitness Costs of Synonymous Mutations. Mol Biol Evol (2016) 0.83
sRNA-Mediated Control of Transcription Termination in E. coli. Cell (2016) 0.83
Clamping the clamp of RNA polymerase. EMBO J (2011) 0.82
Characterization of the detachable Rho-dependent transcription terminator of the fimE gene in Escherichia coli K-12. J Bacteriol (2005) 0.82
Structural energetics of the adenine tract from an intrinsic transcription terminator. J Mol Biol (2010) 0.81
Premature termination of transcription by RNAP II: the beginning of the end. Transcription (2013) 0.81
Deletion of switch 3 results in an archaeal RNA polymerase that is defective in transcript elongation. J Biol Chem (2010) 0.80
In vivo evolution of a catalytic RNA couples trans-splicing to translation. PLoS One (2014) 0.80
Requirements for translation re-initiation in Escherichia coli: roles of initiator tRNA and initiation factors IF2 and IF3. Mol Microbiol (2008) 0.79
Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus. Extremophiles (2010) 0.79
Bacteriophage HK022 Nun protein arrests transcription by blocking lateral mobility of RNA polymerase during transcription elongation. Bacteriophage (2014) 0.78
N protein from lambdoid phages transforms NusA into an antiterminator by modulating NusA-RNA polymerase flap domain interactions. Nucleic Acids Res (2015) 0.78
Analysis of convergent gene transcripts in the obligate intracellular bacterium Rickettsia prowazekii. PLoS One (2011) 0.77
Identification of a conserved branched RNA structure that functions as a factor-independent terminator. Proc Natl Acad Sci U S A (2014) 0.77
Insights into the Mechanisms of Basal Coordination of Transcription Using a Genome-Reduced Bacterium. Cell Syst (2016) 0.77
Suppression of factor-dependent transcription termination by antiterminator RNA. J Bacteriol (2003) 0.77
rRNA antitermination functions with heat shock promoters. J Bacteriol (2003) 0.76
Mg2+-dependent translational speed bump acts to regulate gene transcription. Proc Natl Acad Sci U S A (2016) 0.75
Opposite consequences of two transcription pauses caused by an intrinsic terminator oligo(U): antitermination versus termination by bacteriophage T7 RNA polymerase. J Biol Chem (2011) 0.75
Codon Clarity or Conundrum? Cell Syst (2017) 0.75
Effects of cooperation between translating ribosome and RNA polymerase on termination efficiency of the Rho-independent terminator. Nucleic Acids Res (2015) 0.75
Structural basis for λN-dependent processive transcription antitermination. Nat Microbiol (2017) 0.75
Evidence that the promoter can influence assembly of antitermination complexes at downstream RNA sites. J Bacteriol (2006) 0.75
HK022 Nun Requires Arginine-Rich Motif Residues Distinct from λ N. J Bacteriol (2015) 0.75
Control of transcriptional pausing by biased thermal fluctuations on repetitive genomic sequences. Proc Natl Acad Sci U S A (2016) 0.75
Natural RNA Polymerase Aptamers Regulate Transcription in E. coli. Mol Cell (2017) 0.75
cry1Aa lacks stability elements at its 5'-UTR but integrity of its transcription terminator is critical to prevent decay of its transcript. Curr Microbiol (2006) 0.75
A NusE:NusG complex links transcription and translation. Science (2010) 3.03
Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli. Science (2008) 2.66
DNA damage, homology-directed repair, and DNA methylation. PLoS Genet (2007) 2.29
Linking RNA polymerase backtracking to genome instability in E. coli. Cell (2011) 2.20
Checkpoint signaling from a single DNA interstrand crosslink. Mol Cell (2009) 1.92
Pathways of vitamin A delivery to the embryo: insights from a new tunable model of embryonic vitamin A deficiency. Endocrinology (2005) 1.41
Structural and functional analysis of the E. coli NusB-S10 transcription antitermination complex. Mol Cell (2008) 1.37
Understanding the physiological role of retinol-binding protein in vitamin A metabolism using transgenic and knockout mouse models. Mol Aspects Med (2003) 1.37
Mitochondrial AKAP121 binds and targets protein tyrosine phosphatase D1, a novel positive regulator of src signaling. Mol Cell Biol (2004) 1.33
cAMP-PKA signaling to the mitochondria: protein scaffolds, mRNA and phosphatases. Cell Signal (2005) 1.31
Transcription termination maintains chromosome integrity. Proc Natl Acad Sci U S A (2010) 1.31
Essential role of A-kinase anchor protein 121 for cAMP signaling to mitochondria. J Biol Chem (2002) 1.31
PKA-dependent binding of mRNA to the mitochondrial AKAP121 protein. J Mol Biol (2003) 1.26
Role of E.coli transcription-repair coupling factor Mfd in Nun-mediated transcription termination. J Mol Biol (2003) 1.22
Altered hepatic lipid metabolism in C57BL/6 mice fed alcohol: a targeted lipidomic and gene expression study. J Lipid Res (2011) 1.21
Activation of DSB processing requires phosphorylation of CtIP by ATR. Mol Cell (2012) 1.16
Cdk1 uncouples CtIP-dependent resection and Rad51 filament formation during M-phase double-strand break repair. J Cell Biol (2011) 1.16
Transplacental delivery of retinoid: the role of retinol-binding protein and lipoprotein retinyl ester. Am J Physiol Endocrinol Metab (2004) 1.10
Retinol-binding protein-deficient mice: biochemical basis for impaired vision. Biochemistry (2002) 1.08
The role of extrahepatic retinol binding protein in the mobilization of retinoid stores. J Lipid Res (2004) 1.02
Muscle expression of human retinol-binding protein (RBP). Suppression of the visual defect of RBP knockout mice. J Biol Chem (2002) 1.01
A-kinase anchor protein 84/121 are targeted to mitochondria and mitotic spindles by overlapping amino-terminal motifs. J Mol Biol (2002) 1.00
Requirement for NusG for transcription antitermination in vivo by the lambda N protein. J Bacteriol (2002) 1.00
Proteolysis of MOB1 by the ubiquitin ligase praja2 attenuates Hippo signalling and supports glioblastoma growth. Nat Commun (2013) 0.99
NusA interaction with the α subunit of E. coli RNA polymerase is via the UP element site and releases autoinhibition. Structure (2011) 0.99
PTPD1 supports receptor stability and mitogenic signaling in bladder cancer cells. J Biol Chem (2010) 0.98
Mitochondrial A-kinase anchoring protein 121 binds type II protein kinase A and enhances steroidogenic acute regulatory protein-mediated steroidogenesis in MA-10 mouse leydig tumor cells. Biol Reprod (2007) 0.98
RNA-binding specificity of E. coli NusA. Nucleic Acids Res (2009) 0.97
Replication-independent repair of DNA interstrand crosslinks. Mol Cell (2012) 0.95
Transcription termination by phage HK022 Nun is facilitated by COOH-terminal lysine residues. J Biol Chem (2004) 0.92
Overexpression of phage HK022 Nun protein is toxic for Escherichia coli. J Mol Biol (2008) 0.91
The rate of the molecular clock and the cost of gratuitous protein synthesis. Genome Biol (2010) 0.89
Single-gene deletion mutants of Escherichia coli with altered sensitivity to bicyclomycin, an inhibitor of transcription termination factor Rho. J Bacteriol (2011) 0.88
The differences between ICL repair during and outside of S phase. Trends Biochem Sci (2013) 0.88
Transcriptional activity of the murine retinol-binding protein gene is regulated by a multiprotein complex containing HMGA1, p54 nrb/NonO, protein-associated splicing factor (PSF) and steroidogenic factor 1 (SF1)/liver receptor homologue 1 (LRH-1). Int J Biochem Cell Biol (2009) 0.87
Nus transcription elongation factors and RNase III modulate small ribosome subunit biogenesis in Escherichia coli. Mol Microbiol (2012) 0.87
Fine tuning of the E. coli NusB:NusE complex affinity to BoxA RNA is required for processive antitermination. Nucleic Acids Res (2009) 0.86
Targeted DNA methylation by homology-directed repair in mammalian cells. Transcription reshapes methylation on the repaired gene. Nucleic Acids Res (2013) 0.86
Effect of vitamin A depletion on nonvisual phototransduction pathways in cryptochromeless mice. J Biol Rhythms (2004) 0.85
Role of E.coli NusA in phage HK022 Nun-mediated transcription termination. J Mol Biol (2006) 0.84
Diethylnitrosamine-induced hepatocarcinogenesis is suppressed in lecithin:retinol acyltransferase-deficient mice primarily through retinoid actions immediately after carcinogen administration. Carcinogenesis (2011) 0.84
The N-terminus is unstructured, but not dynamically disordered, in the complex between HK022 Nun protein and lambda-phage BoxB RNA hairpin. FEBS Lett (2003) 0.83
An autoinhibited state in the structure of Thermotoga maritima NusG. Structure (2013) 0.81
Phage HK022 Nun protein represses translation of phage lambda N (transcription termination/translation repression). Proc Natl Acad Sci U S A (2003) 0.80
The Y39A mutation of HK022 Nun disrupts a boxB interaction but preserves termination activity. Biochemistry (2008) 0.79
Role of an RNase III binding site in transcription termination at lambda nutL by HK022 Nun protein. J Bacteriol (2006) 0.76
Correction: DNA Damage, Homology-Directed Repair, and DNA Methylation. PLoS Genet (2017) 0.75
Bacteriophage HK022 Nun protein: a specific transcription termination factor that excludes bacteriophage lambda. Methods Enzymol (2003) 0.75
Amos Oppenheim (31 October 1934 to 24 September 2006). Mol Microbiol (2008) 0.75