Published in J Mol Biol on November 01, 2002
Protein interaction mapping: a Drosophila case study. Genome Res (2005) 4.15
Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network. Genome Biol (2003) 3.80
A first-draft human protein-interaction map. Genome Biol (2004) 3.64
Predicting protein-protein interactions based only on sequences information. Proc Natl Acad Sci U S A (2007) 3.06
A proteome-wide protein interaction map for Campylobacter jejuni. Genome Biol (2007) 2.13
Role for erbin in bacterial activation of Nod2. Infect Immun (2006) 1.63
Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae. Nucleic Acids Res (2004) 1.31
The nuclear interactor PYL8/RCAR3 of Fagus sylvatica FsPP2C1 is a positive regulator of abscisic acid signaling in seeds and stress. Plant Physiol (2009) 1.11
PRICKLE1 interaction with SYNAPSIN I reveals a role in autism spectrum disorders. PLoS One (2013) 0.97
Identification of global ferredoxin interaction networks in Chlamydomonas reinhardtii. J Biol Chem (2013) 0.94
Protein-protein interaction based on pairwise similarity. BMC Bioinformatics (2009) 0.89
An E3 ubiquitin ligase, Really Interesting New Gene (RING) Finger 41, is a candidate gene for anxiety-like behavior and beta-carboline-induced seizures. Biol Psychiatry (2008) 0.88
Respiratory syncytial virus assembles into structured filamentous virion particles independently of host cytoskeleton and related proteins. PLoS One (2012) 0.87
Bio::Homology::InterologWalk--a Perl module to build putative protein-protein interaction networks through interolog mapping. BMC Bioinformatics (2011) 0.86
Microtubule severing by the katanin complex is activated by PPFR-1-dependent MEI-1 dephosphorylation. J Cell Biol (2013) 0.79
Identification of New Potential Interaction Partners for Human Cytoplasmic Copper Chaperone Atox1: Roles in Gene Regulation? Int J Mol Sci (2015) 0.78
Contribution of structural genomics to understanding the biology of Escherichia coli. J Bacteriol (2003) 0.77
Prediction of interacting proteins from homology-modeled complex structures using sequence and structure scores. Biophysics (Nagoya-shi) (2007) 0.76
The Enhancer of split transcription factor Her8a is a novel dimerisation partner for Her3 that controls anterior hindbrain neurogenesis in zebrafish. BMC Dev Biol (2011) 0.76
TRIP13-deficient tubular epithelial cells are susceptible to apoptosis following acute kidney injury. Sci Rep (2017) 0.75
Interactions between mitoNEET and NAF-1 in cells. PLoS One (2017) 0.75
Rhomboid family member 2 regulates cytoskeletal stress-associated Keratin 16. Nat Commun (2017) 0.75
The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data. Nat Biotechnol (2004) 16.08
Nod2 is a general sensor of peptidoglycan through muramyl dipeptide (MDP) detection. J Biol Chem (2003) 10.79
The minimum information required for reporting a molecular interaction experiment (MIMIx). Nat Biotechnol (2007) 8.24
Nod1 detects a unique muropeptide from gram-negative bacterial peptidoglycan. Science (2003) 7.49
Nod1 responds to peptidoglycan delivered by the Helicobacter pylori cag pathogenicity island. Nat Immunol (2004) 7.22
Nod1 and Nod2 direct autophagy by recruiting ATG16L1 to the plasma membrane at the site of bacterial entry. Nat Immunol (2009) 5.83
Protein interaction mapping: a Drosophila case study. Genome Res (2005) 4.15
Peptidoglycan molecular requirements allowing detection by Nod1 and Nod2. J Biol Chem (2003) 3.83
Myosin VIIa, harmonin and cadherin 23, three Usher I gene products that cooperate to shape the sensory hair cell bundle. EMBO J (2002) 3.53
Ly6C hi monocytes in the inflamed colon give rise to proinflammatory effector cells and migratory antigen-presenting cells. Immunity (2012) 3.18
Functional proteomics mapping of a human signaling pathway. Genome Res (2004) 3.04
The Shigella flexneri effector OspG interferes with innate immune responses by targeting ubiquitin-conjugating enzymes. Proc Natl Acad Sci U S A (2005) 2.88
Toll-like receptor 2-dependent bacterial sensing does not occur via peptidoglycan recognition. EMBO Rep (2004) 2.64
Downregulation of the Drosophila immune response by peptidoglycan-recognition proteins SC1 and SC2. PLoS Pathog (2006) 2.27
The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nat Biotechnol (2012) 2.14
Myosin XVa and whirlin, two deafness gene products required for hair bundle growth, are located at the stereocilia tips and interact directly. Hum Mol Genet (2004) 2.04
Function of the drosophila pattern-recognition receptor PGRP-SD in the detection of Gram-positive bacteria. Nat Immunol (2004) 1.93
Peptidoglycan molecular requirements allowing detection by the Drosophila immune deficiency pathway. J Immunol (2004) 1.62
Proteomics, human proteome project, and chromosomes. J Proteome Res (2010) 1.54
Comprehensive proteomic analysis of breast cancer cell membranes reveals unique proteins with potential roles in clinical cancer. J Biol Chem (2002) 1.53
Helicobacter pylori versus the host: remodeling of the bacterial outer membrane is required for survival in the gastric mucosa. PLoS Pathog (2011) 1.40
Building protein-protein networks by two-hybrid mating strategy. Methods Enzymol (2002) 1.37
Role of AmiA in the morphological transition of Helicobacter pylori and in immune escape. PLoS Pathog (2006) 1.34
The Shq1p.Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis. J Biol Chem (2002) 1.30
Nod1 participates in the innate immune response to Pseudomonas aeruginosa. J Biol Chem (2005) 1.29
The frameshift mutation in Nod2 results in unresponsiveness not only to Nod2- but also Nod1-activating peptidoglycan agonists. J Biol Chem (2005) 1.28
A M23B family metallopeptidase of Helicobacter pylori required for cell shape, pole formation and virulence. Mol Microbiol (2010) 1.26
Correlation between alterations of the penicillin-binding protein 2 and modifications of the peptidoglycan structure in Neisseria meningitidis with reduced susceptibility to penicillin G. J Biol Chem (2003) 1.25
Peptidoglycan N-acetylglucosamine deacetylases from Bacillus cereus, highly conserved proteins in Bacillus anthracis. J Biol Chem (2005) 1.22
Standard guidelines for the chromosome-centric human proteome project. J Proteome Res (2012) 1.20
Biochemical characterization of protein complexes from the Helicobacter pylori protein interaction map: strategies for complex formation and evidence for novel interactions within type IV secretion systems. Mol Cell Proteomics (2004) 1.20
Detailed structural analysis of the peptidoglycan of the human pathogen Neisseria meningitidis. J Biol Chem (2003) 1.15
Super-resolution microscopy reveals cell wall dynamics and peptidoglycan architecture in ovococcal bacteria. Mol Microbiol (2011) 1.15
InteroPORC: automated inference of highly conserved protein interaction networks. Bioinformatics (2008) 1.13
Peptidoglycan detection by mammals and flies. Microbes Infect (2007) 1.08
ARHGAP10 is necessary for alpha-catenin recruitment at adherens junctions and for Listeria invasion. Nat Cell Biol (2005) 1.06
Cadmium triggers an integrated reprogramming of the metabolism of Synechocystis PCC6803, under the control of the Slr1738 regulator. BMC Genomics (2007) 1.05
The innate immune molecule, NOD1, regulates direct killing of Helicobacter pylori by antimicrobial peptides. Cell Microbiol (2009) 1.05
Shroom2, a myosin-VIIa- and actin-binding protein, directly interacts with ZO-1 at tight junctions. J Cell Sci (2007) 1.05
Characterization of Helicobacter pylori lytic transglycosylases Slt and MltD. J Bacteriol (2006) 1.05
A novel metal transporter mediating manganese export (MntX) regulates the Mn to Fe intracellular ratio and Neisseria meningitidis virulence. PLoS Pathog (2011) 1.04
OatA, a peptidoglycan O-acetyltransferase involved in Listeria monocytogenes immune escape, is critical for virulence. J Infect Dis (2011) 1.03
The thioredoxin reductase-glutaredoxins-ferredoxin crossroad pathway for selenate tolerance in Synechocystis PCC6803. Mol Microbiol (2008) 1.02
Mycolactone diffuses into the peripheral blood of Buruli ulcer patients--implications for diagnosis and disease monitoring. PLoS Negl Trop Dis (2011) 0.99
PHR1, an integral membrane protein of the inner ear sensory cells, directly interacts with myosin 1c and myosin VIIa. J Cell Sci (2005) 0.97
Downregulation of the Na/K-ATPase pump by leptospiral glycolipoprotein activates the NLRP3 inflammasome. J Immunol (2012) 0.95
HobA--a novel protein involved in initiation of chromosomal replication in Helicobacter pylori. Mol Microbiol (2007) 0.94
Almost all human gastric mucin O-glycans harbor blood group A, B or H antigens and are potential binding sites for Helicobacter pylori. Glycobiology (2012) 0.92
Peptidoglycan maturation enzymes affect flagellar functionality in bacteria. Mol Microbiol (2012) 0.91
Characterization of the elongasome core PBP2 : MreC complex of Helicobacter pylori. Mol Microbiol (2011) 0.91
Listeria monocytogenes multidrug resistance transporters and cyclic di-AMP, which contribute to type I interferon induction, play a role in cell wall stress. J Bacteriol (2013) 0.91
Antiviral drug discovery strategy using combinatorial libraries of structurally constrained peptides. J Virol (2004) 0.89
The functional vanGCd cluster of Clostridium difficile does not confer vancomycin resistance. Mol Microbiol (2013) 0.88
The effect of bulgecin A on peptidoglycan metabolism and physiology of Helicobacter pylori. Microb Drug Resist (2012) 0.86
Expression and functional importance of innate immune receptors by intestinal epithelial cells. Cell Mol Life Sci (2011) 0.86
Penicillin resistance compromises Nod1-dependent proinflammatory activity and virulence fitness of neisseria meningitidis. Cell Host Microbe (2013) 0.84
De-O-acetylation of peptidoglycan regulates glycan chain extension and affects in vivo survival of Neisseria meningitidis. Mol Microbiol (2013) 0.84
Inheritance of the lysozyme inhibitor Ivy was an important evolutionary step by Yersinia pestis to avoid the host innate immune response. J Infect Dis (2013) 0.83
Distinct functions of polysaccharide deacetylases in cell shape, neutral polysaccharide synthesis and virulence of Bacillus anthracis. Mol Microbiol (2013) 0.82
N-acetylglucosamine deacetylases modulate the anchoring of the gamma-glutamyl capsule to the cell wall of Bacillus anthracis. Microb Drug Resist (2014) 0.80
N-glycolylated peptidoglycan contributes to the immunogenicity but not pathogenicity of Mycobacterium tuberculosis. J Infect Dis (2013) 0.80
Protein domain networking. Nat Biotechnol (2002) 0.79
Helicobacter pylori has an unprecedented nitric oxide detoxifying system. Antioxid Redox Signal (2012) 0.78
FrxA is an S-nitrosoglutathione reductase enzyme that contributes to Helicobacter pylori pathogenicity. FEBS J (2014) 0.77
Crosstalk between Helicobacter pylori and gastric epithelial cells is impaired by docosahexaenoic acid. PLoS One (2013) 0.77
Identification and characterization of a novel RanGTP-binding protein in the yeast Saccharomyces cerevisiae. J Biol Chem (2003) 0.77
Draft Genome Sequence of Strain X47-2AL, a Feline Helicobacter pylori Isolate. Genome Announc (2013) 0.76
[Life in a test tube? Biologists, keep going!]. Med Sci (Paris) (2010) 0.75
"4D Biology for health and disease" workshop report. N Biotechnol (2010) 0.75