Xenopus, the next generation: X. tropicalis genetics and genomics.

PubWeight™: 1.37‹?› | Rank: Top 10%

🔗 View Article (PMID 12454920)

Published in Dev Dyn on December 01, 2002

Authors

Nicolas Hirsch1, Lyle B Zimmerman, Robert M Grainger

Author Affiliations

1: Department of Biology, University of Virginia, Charlottesville, Virginia 22904-4328, USA.

Articles citing this

Xenopus tropicalis egg extracts provide insight into scaling of the mitotic spindle. J Cell Biol (2007) 1.63

Accelerated gene evolution and subfunctionalization in the pseudotetraploid frog Xenopus laevis. BMC Biol (2007) 1.59

Xenopus research: metamorphosed by genetics and genomics. Trends Genet (2011) 1.58

Deficient induction response in a Xenopus nucleocytoplasmic hybrid. PLoS Biol (2011) 1.50

Genetic screens for mutations affecting development of Xenopus tropicalis. PLoS Genet (2006) 1.33

Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling. Genome Res (2006) 1.31

Evolution of thermal response properties in a cold-activated TRP channel. PLoS One (2009) 1.22

A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus. Nucleic Acids Res (2006) 1.17

Rapid gynogenetic mapping of Xenopus tropicalis mutations to chromosomes. Dev Dyn (2009) 1.08

Have we achieved a unified model of photoreceptor cell fate specification in vertebrates? Brain Res (2007) 1.00

The use of antisense oligonucleotides in Xenopus oocytes. Methods (2010) 0.99

Xenopus tropicalis as a model organism for genetics and genomics: past, present, and future. Methods Mol Biol (2012) 0.98

Research proceedings on amphibian model organisms. Dongwuxue Yanjiu (2016) 0.97

Evolution of vertebrate transient receptor potential vanilloid 3 channels: opposite temperature sensitivity between mammals and western clawed frogs. PLoS Genet (2011) 0.97

Roles of mutation and selection in speciation: from Hugo de Vries to the modern genomic era. Genome Biol Evol (2011) 0.95

Inner ear formation during the early larval development of Xenopus laevis. Dev Dyn (2005) 0.92

Functional assessment of human coding mutations affecting skin pigmentation using zebrafish. PLoS One (2012) 0.91

Transgenesis in Xenopus using the Sleeping Beauty transposon system. Dev Dyn (2009) 0.91

Coexistence of Y, W, and Z sex chromosomes in Xenopus tropicalis. Proc Natl Acad Sci U S A (2015) 0.90

A method for generating transgenic frog embryos. Methods Mol Biol (2008) 0.86

Structural and functional characteristics of xenavidin, the first frog avidin from Xenopus tropicalis. BMC Struct Biol (2009) 0.83

Cilia in cell signaling and human disorders. Protein Cell (2010) 0.83

Mycobacterium liflandii infection in European colony of Silurana tropicalis. Emerg Infect Dis (2007) 0.81

Cryptochrome genes are highly expressed in the ovary of the African clawed frog, Xenopus tropicalis. PLoS One (2010) 0.80

Remobilization of Sleeping Beauty transposons in the germline of Xenopus tropicalis. Mob DNA (2011) 0.78

Evolution of Heat Sensors Drove Shifts in Thermosensation between Xenopus Species Adapted to Different Thermal Niches. J Biol Chem (2016) 0.76

Breeding based remobilization of Tol2 transposon in Xenopus tropicalis. PLoS One (2013) 0.75

Defining progressive stages in the commitment process leading to embryonic lens formation. Genesis (2012) 0.75

Induction of diploid gynogenesis in an evolutionary model organism, the three-spined stickleback (Gasterosteus aculeatus). BMC Dev Biol (2011) 0.75

Articles by these authors

The genome of the Western clawed frog Xenopus tropicalis. Science (2010) 4.70

Simple and efficient CRISPR/Cas9-mediated targeted mutagenesis in Xenopus tropicalis. Genesis (2013) 1.84

Expression profiling the temperature-dependent amphibian response to infection by Batrachochytrium dendrobatidis. PLoS One (2009) 1.64

Xenopus research: metamorphosed by genetics and genomics. Trends Genet (2011) 1.58

A gynogenetic screen to isolate naturally occurring recessive mutations in Xenopus tropicalis. Mech Dev (2005) 1.36

Highly efficient transgenesis in Xenopus tropicalis using I-SceI meganuclease. Mech Dev (2006) 1.33

Genetic screens for mutations affecting development of Xenopus tropicalis. PLoS Genet (2006) 1.33

Convergence of a head-field selector Otx2 and Notch signaling: a mechanism for lens specification. Development (2007) 1.33

High-throughput transgenesis in Xenopus using I-SceI meganuclease. Nat Protoc (2006) 1.32

Absence of heartbeat in the Xenopus tropicalis mutation muzak is caused by a nonsense mutation in cardiac myosin myh6. Dev Biol (2009) 1.20

Xenopus tropicalis transgenic lines and their use in the study of embryonic induction. Dev Dyn (2002) 1.20

Rapid gynogenetic mapping of Xenopus tropicalis mutations to chromosomes. Dev Dyn (2009) 1.08

Paralysis and delayed Z-disc formation in the Xenopus tropicalis unc45b mutant dicky ticker. BMC Dev Biol (2010) 1.00

Inducible control of tissue-specific transgene expression in Xenopus tropicalis transgenic lines. Mech Dev (2002) 0.97

The hitchhiker's guide to Xenopus genetics. Genesis (2012) 0.94

Bio-electrospraying living Xenopus tropicalis embryos: investigating the structural, functional and biological integrity of a model organism. Analyst (2009) 0.92

Determination of the embryonic inner ear. J Neurobiol (2002) 0.92

The secreted integrin ligand nephronectin is necessary for forelimb formation in Xenopus tropicalis. Dev Biol (2010) 0.91

Simple, fast, tissue-specific bacterial artificial chromosome transgenesis in Xenopus. Genesis (2011) 0.89

Microinjection of Xenopus embryos. Cold Spring Harb Protoc (2010) 0.89

Development of Xenopus resource centers: the National Xenopus Resource and the European Xenopus Resource Center. Genesis (2012) 0.89

A re-examination of lens induction in chicken embryos: in vitro studies of early tissue interactions. Int J Dev Biol (2004) 0.87

A large pseudoautosomal region on the sex chromosomes of the frog Silurana tropicalis. Genome Biol Evol (2013) 0.85

Deep ancestry of mammalian X chromosome revealed by comparison with the basal tetrapod Xenopus tropicalis. BMC Genomics (2012) 0.84

Xenopus laevis In Vitro Fertilization and Natural Mating Methods. CSH Protoc (2007) 0.84

Efficient high-throughput sequencing of a laser microdissected chromosome arm. BMC Genomics (2013) 0.83

Dejellying Xenopus laevis Embryos. CSH Protoc (2007) 0.81

Animal Cap Isolation from Xenopus laevis. CSH Protoc (2007) 0.81

Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements. Genome Res (2013) 0.80

Calibration of the injection volume for microinjection of Xenopus oocytes and embryos. Cold Spring Harb Protoc (2010) 0.79

Synthesis and purification of digoxigenin-labeled RNA probes for in situ hybridization. CSH Protoc (2007) 0.79

Xenopus laevis Animal Cap/Vegetal Endoderm Conjugates. CSH Protoc (2007) 0.78

Isolating Xenopus laevis Testes. CSH Protoc (2007) 0.78

Housing and Feeding of Xenopus laevis. CSH Protoc (2007) 0.78

Dissociation and Reaggregation of Xenopus laevis Animal Caps. CSH Protoc (2007) 0.78

Xenopus laevis Egg Collection. CSH Protoc (2007) 0.78

Developmental genetics in Xenopus tropicalis. Methods Mol Biol (2011) 0.78

Removing the Vitelline Membrane from Xenopus laevis Embryos. CSH Protoc (2007) 0.78

Ectodermal (Animal Cap) Layer Separations in Xenopus laevis. CSH Protoc (2007) 0.78

Inducing Ovulation in Xenopus laevis. CSH Protoc (2007) 0.78

Baskets for in situ hybridization and immunohistochemistry. CSH Protoc (2007) 0.78

Microinjection of Xenopus oocytes. Cold Spring Harb Protoc (2010) 0.77

Comparative genomics-based identification and analysis of cis-regulatory elements. Methods Mol Biol (2012) 0.77

Xenopus laevis Animal Cap/Dorsal Mesoderm Conjugates. CSH Protoc (2007) 0.77

Microdissection: Explant and Transplant Assays in Xenopus laevis. CSH Protoc (2007) 0.76

Microinjection of RNA and preparation of secreted proteins from Xenopus oocytes. Cold Spring Harb Protoc (2010) 0.76

Husbandry of Xenopus tropicalis. Methods Mol Biol (2012) 0.76

Roles of ADAM13-regulated Wnt activity in early Xenopus eye development. Dev Biol (2011) 0.76

Genetic analysis of Xenopus tropicalis. Methods Mol Biol (2012) 0.75

Defining progressive stages in the commitment process leading to embryonic lens formation. Genesis (2012) 0.75

Early stages of induction of anterior head ectodermal properties in Xenopus embryos are mediated by transcriptional cofactor ldb1. Dev Dyn (2014) 0.75

Xenopus laevis Keller Explants. CSH Protoc (2007) 0.75

Isolation of Xenopus oocytes. Cold Spring Harb Protoc (2010) 0.75

Xenopus laevis Einstecks. CSH Protoc (2007) 0.75

Dissection of Tightly Adhering Xenopus laevis Tissues by Trypsin Treatment. CSH Protoc (2007) 0.75

Cortical Isolation from Xenopus laevis Oocytes and Eggs. CSH Protoc (2007) 0.75

Isolation of DNA from red blood cells in Xenopus. Cold Spring Harb Protoc (2012) 0.75

Evolutionary importance of translation elongation factor eEF1A variant switching: eEF1A1 down-regulation in muscle is conserved in Xenopus but is controlled at a post-transcriptional level. Biochem Biophys Res Commun (2011) 0.75

Transplantation of Xenopus laevis Lens Ectoderm. CSH Protoc (2007) 0.75

Defolliculation of Xenopus oocytes. Cold Spring Harb Protoc (2010) 0.75

Embryo dissection and micromanipulation tools. CSH Protoc (2007) 0.75

Handling Xenopus laevis Adults. CSH Protoc (2007) 0.75