PubRank

Toshimasa Ishida

Author PubWeight™ 42.45‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Crystal structures of 7-methylguanosine 5'-triphosphate (m(7)GTP)- and P(1)-7-methylguanosine-P(3)-adenosine-5',5'-triphosphate (m(7)GpppA)-bound human full-length eukaryotic initiation factor 4E: biological importance of the C-terminal flexible region. Biochem J 2002 1.47
2 Structural features of human initiation factor 4E, studied by X-ray crystal analyses and molecular dynamics simulations. J Mol Biol 2003 1.37
3 Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods. Biochim Biophys Acta 2005 1.09
4 Crystal structure and molecular dynamics simulation of ubiquitin-like domain of murine parkin. Biochim Biophys Acta 2008 1.05
5 Alchivemycin A, a bioactive polycyclic polyketide with an unprecedented skeleton from Streptomyces sp. Org Lett 2010 1.03
6 Aromaticity of planar boron clusters confirmed. J Am Chem Soc 2005 1.02
7 A conserved motif within the flexible C-terminus of the translational regulator 4E-BP is required for tight binding to the mRNA cap-binding protein eIF4E. Biochem J 2012 0.97
8 The rare crystallographic structure of d(CGCGCG)(2): the natural spermidine molecule bound to the minor groove of left-handed Z-DNA d(CGCGCG)(2) at 10 degrees C. Biochem Biophys Res Commun 2007 0.95
9 Aggregation analysis of the microtubule binding domain in tau protein by spectroscopic methods. J Biochem 2003 0.94
10 Brasilicardin A. A Novel Tricyclic Metabolite with Potent Immunosuppressive Activity from Actinomycete Nocardiabrasiliensis. J Org Chem 1998 0.90
11 Effect of N-terminal region of eIF4E and Ser65-phosphorylation of 4E-BP1 on interaction between eIF4E and 4E-BP1 fragment peptide. J Biochem 2006 0.89
12 Structural scaffold for eIF4E binding selectivity of 4E-BP isoforms: crystal structure of eIF4E binding region of 4E-BP2 and its comparison with that of 4E-BP1. J Pept Sci 2011 0.86
13 Identification and function of the second eIF4E-binding region in N-terminal domain of eIF4G: comparison with eIF4E-binding protein. Biochem Biophys Res Commun 2011 0.85
14 Importance of C-terminal flexible region of 4E-binding protein in binding with eukaryotic initiation factor 4E. FEBS Lett 2008 0.85
15 Different associational and conformational behaviors between the second and third repeat fragments in the tau microtubule-binding domain. Eur J Biochem 2004 0.84
16 Binding preference of eIF4E for 4E-binding protein isoform and function of eIF4E N-terminal flexible region for interaction, studied by SPR analysis. Biochem Biophys Res Commun 2007 0.84
17 Biosynthetic origin of alchivemycin A, a new polyketide from Streptomyces and absolute configuration of alchivemycin B. Org Lett 2013 0.84
18 Unusually high aromaticity and diatropicity of bond-alternate benzene. J Phys Chem A 2010 0.83
19 Three-/four-repeat-dependent aggregation profile of tau microtubule-binding domain clarified by dynamic light scattering analysis. Biochem Biophys Res Commun 2009 0.83
20 Possible role of each repeat structure of the microtubule-binding domain of the tau protein in in vitro aggregation. J Biochem 2005 0.83
21 Rigid backbone moiety of KNI-272, a highly selective HIV protease inhibitor: methanol, acetone and dimethylsulfoxide solvated forms of 3-[3-benzyl-2-hydroxy-9-(isoquinolin-5-yloxy)-6-methylsulfanylmethyl-5,8-dioxo-4,7-diazanonanoyl]-N-tert-butyl-1,3-thiazolidine-4-carboxamide. Acta Crystallogr B 2004 0.83
22 Polyamines stabilize left-handed Z-DNA: using X-ray crystallographic analysis, we have found a new type of polyamine (PA) that stabilizes left-handed Z-DNA. Biochem Biophys Res Commun 2007 0.82
23 Structural basis for development of cathepsin B-specific noncovalent-type inhibitor: crystal structure of cathepsin B-E64c complex. Biochim Biophys Acta 2002 0.82
24 Crystallization and preliminary X-ray crystallographic analysis of BxlE, a xylobiose transporter from Streptomyces thermoviolaceus OPC-520. Acta Crystallogr Sect F Struct Biol Cryst Commun 2007 0.82
25 Quantitative evaluation of each catalytic subsite of cathepsin B for inhibitory activity based on inhibitory activity-binding mode relationship of epoxysuccinyl inhibitors by X-ray crystal structure analyses of complexes. J Mol Biol 2006 0.82
26 Structural function of C-terminal amidation of endomorphin. Conformational comparison of mu-selective endomorphin-2 with its C-terminal free acid, studied by 1H-NMR spectroscopy, molecular calculation, and X-ray crystallography. FEBS J 2005 0.82
27 Inclusion effect and structural basis of cyclodextrins for increased extraction of medicinal alkaloids from natural medicines. Chem Pharm Bull (Tokyo) 2007 0.81
28 Different inhibitory response of cyanidin and methylene blue for filament formation of tau microtubule-binding domain. Biochem Biophys Res Commun 2008 0.81
29 Conformational transition state is responsible for assembly of microtubule-binding domain of tau protein. Biochem Biophys Res Commun 2004 0.81
30 Enantioselective synthesis of a phenylalanine library containing alkyl groups on the aromatic moiety: confirmation of stereostructure by X-ray analysis. Chem Pharm Bull (Tokyo) 2006 0.81
31 Importance of Tyr310 residue in the third repeat of microtubule binding domain for filament formation of tau protein. J Biochem 2009 0.81
32 Structural studies on C-amidated amino acids and peptides: function of amide group in molecular association in crystal structures of Val-Gly-NH2, Ser-Phe-NH2, Gly-Tyr-NH2 and Pro-Tyr-NH2 hydrochloride salts. Chem Pharm Bull (Tokyo) 2002 0.80
33 Effects of different anti-tau antibodies on tau fibrillogenesis: RTA-1 and RTA-2 counteract tau aggregation. FEBS Lett 2005 0.80
34 C-H ... π interplay between Ile308 and Tyr310 residues in the third repeat of microtubule binding domain is indispensable for self-assembly of three- and four-repeat tau. J Biochem 2012 0.80
35 Amphipathic helical behavior of the third repeat fragment in the tau microtubule-binding domain, studied by (1)H NMR spectroscopy. Biochem Biophys Res Commun 2002 0.80
36 Linkage-dependent contribution of repeat peptides to self-aggregation of three- or four-repeat microtubule-binding domains in tau protein. FEBS J 2008 0.79
37 Magnetic resonance energies of heterocyclic conjugated molecules. J Phys Chem A 2007 0.79
38 Importance of local structures of second and third repeat fragments of microtubule-binding domain for tau filament formation. FEBS Lett 2005 0.78
39 Turnip mosaic virus genome-linked protein VPg binds C-terminal region of cap-bound initiation factor 4E orthologue without exhibiting host cellular specificity. J Biochem 2009 0.78
40 Domain-dependent interaction of eukaryotic initiation factor eIF4A for binding to middle and C-terminal domains of eIF4G. J Biochem 2009 0.78
41 Structural evaluation of conformational transition state responsible for self-assembly of tau microtubule-binding domain. Biochem Biophys Res Commun 2005 0.77
42 Crystal and molecular structure of an (S)-(+)-enantiomer of modafinil, a novel wake-promoting agent. Chem Pharm Bull (Tokyo) 2004 0.77
43 Fluorescence-coupled CD conformational monitoring of filament formation of tau microtubule-binding repeat domain. Biochem Biophys Res Commun 2006 0.77
44 Collision energy dependence of the O(1D) + HCl --> OH + Cl(2P) reaction studied by crossed beam scattering and quasiclassical trajectory calculations on ab initio potential energy surfaces. J Phys Chem A 2008 0.77
45 Effect of DNA on filament formation of tau microtubule-binding domain: structural dependence of DNA. Chem Pharm Bull (Tokyo) 2007 0.77
46 Marked difference between self-aggregations of first and fourth repeat peptides on tau microtubule-binding domain in acidic solution. J Biochem 2007 0.77
47 Ab initio nonadiabatic quantum dynamics of cyclohexadiene/hexatriene ultrafast photoisomerization. J Chem Phys 2006 0.77
48 Crystallization and preliminary X-ray crystallographic analysis of BxlA, an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520. Acta Crystallogr Sect F Struct Biol Cryst Commun 2010 0.77
49 The X-ray crystallographic study of the conformation of Z-DNA which bound to polyamine for the minor groove at room temperature and low temperature. Nucleic Acids Symp Ser (Oxf) 2004 0.76
50 Interplay between I308 and Y310 residues in the third repeat of microtubule-binding domain is essential for tau filament formation. FEBS Lett 2010 0.76
51 Crystallization and preliminary X-ray crystallographic analysis of Ca2+-free primary Ca2+-sensor of Na+/Ca2+ exchanger. Acta Crystallogr Sect F Struct Biol Cryst Commun 2008 0.75
52 CH-π interaction in VQIVYK sequence elucidated by NMR spectroscopy is essential for PHF formation of tau. Biopolymers 2014 0.75
53 Theoretical study on carbon-carbon short contact of ∼2.3 Å: intermediate state between nonbonding and σ-covalent bonding. J Phys Chem A 2015 0.75
54 Stabilization of the left-handed Z-DNA with monoamines and polyamines. Nucleic Acids Symp Ser (Oxf) 2005 0.75
55 Cell adhesion inhibitory activity of (d)-corynoline, a hexahydrobenzo[c]phenanthridine-type alkaloid, and its structure-activity relationship, studied by X-ray crystal structure analysis and molecular docking study. Bioorg Med Chem 2005 0.75
56 Absolute configuration of TPU-0043, a pentaene macrolide from Streptomyces sp. J Antibiot (Tokyo) 2005 0.75
57 The X-ray crystallographic study of long chain left handed Z-DNA and polyamine complex and structural chemistry study of effection by polyamine for the Z-DNA. Nucleic Acids Res Suppl 2002 0.75
58 Laser control of reactions of photoswitching functional molecules. J Chem Phys 2006 0.75
59 Analytical study of superaromaticity in cycloarenes and related coronoid hydrocarbons. J Phys Chem A 2013 0.75
60 Electronic and magnetic characteristics of polycyclic aromatic hydrocarbons with factorizable Kekulé structure counts. J Phys Chem A 2011 0.75
61 Nonadiabatic ab initio dynamics of a model protonated Schiff base of 9-cis retinal. J Phys Chem A 2010 0.75
62 Photochemical dynamics of indolylmaleimide derivatives. Phys Chem Chem Phys 2012 0.75
63 Calix[6]arene-based template for X-ray crystallographic analysis of template-assembled synthetic proteins. Chembiochem 2006 0.75
64 Binding mode of novel 1-substituted quinazoline derivatives to poly(ADP-ribose) polymerase-catalytic domain, revealed by X-ray crystal structure analysis of complexes. Biochim Biophys Acta 2006 0.75
65 Possible molecular hydrogen formation mediated by the radical cations of anthracene and pyrene. J Comput Chem 2003 0.75
66 Structural scaffold of 18-crown-6 tetracarboxylic Acid for optical resolution of chiral amino acid: x-ray crystal analyses of complexes of D- and L-isomers of serine and glutamic acid. Chem Pharm Bull (Tokyo) 2006 0.75
67 Tunneling splitting of energy levels and rotational constants in the vinyl radical C2H3. J Phys Chem A 2006 0.75
68 A crystal structure study when crystallized only in d(CG)3 + methylamine and a d(CG)3 + metal ion. Nucleic Acids Symp Ser (Oxf) 2006 0.75
69 Detection of free monomeric silver(I) and gold(I) cyanides, AgCN and AuCN: microwave spectra and molecular structure. J Am Chem Soc 2009 0.75
70 One-pot synthesis of helical aromatics: stereoselectivity, stability against racemization, and assignment of absolute configuration assisted by experimental and theoretical circular dichroism. J Org Chem 2004 0.75
71 Amine free crystal structure: the crystal structure of d(CGCGCG)2 and methylamine complex crystal. Biochem Biophys Res Commun 2006 0.75
72 The development of crystallization and X-ray crystallography method of long stem DNA. Nucleic Acids Symp Ser (Oxf) 2005 0.75
73 Aggregation feature of fluorine-substituted benzene rings and intermolecular C-H.F interaction: crystal structure analyses of mono- and trifluoro-L-phenylalanines. Chem Pharm Bull (Tokyo) 2003 0.75
74 The crystallographic study of left-handed Z-DNA d(CGCGCG)2 and thermine complexes crystallized at various temperatures and at various concentration of cations. Biochem Biophys Res Commun 2008 0.75
75 QM/MM trajectory surface hopping approach to photoisomerization of rhodopsin and isorhodopsin: the origin of faster and more efficient isomerization for rhodopsin. J Phys Chem B 2012 0.75
76 Self-assembled octameric cage constructed by the potassium salt of p-tert-butylcalix[6]arene p-bromophenylalanine derivative in the solid state. Chem Commun (Camb) 2006 0.75
77 Structural scaffold of 18-crown-6 tetracarboxylic acid for optical resolution of chiral amino acid: X-ray crystal analyses and energy calculations of complexes of D- and L-isomers of tyrosine, isoleucine, methionine and phenylglycine. Org Biomol Chem 2004 0.75
78 Concerted interaction between conjugated double bond CHs and multiple OHs in polyene macrolide antibiotic chainin: weak =C-H...O interactions responsible for intrinsic molecular assembly. Chem Commun (Camb) 2003 0.75
79 Function of AGCA tetrads in (CAG)n repeats. Nucleic Acids Symp Ser (Oxf) 2004 0.75
80 Guest-dependent conformation of 18-crown-6 tetracarboxylic acid: relation to chiral separation of racemic amino acids. Chirality 2008 0.75