Published in Mol Cell Biol on May 01, 2003
Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis. Genes Dev (2005) 4.50
Cell and plastid division are coordinated through the prereplication factor AtCDT1. Proc Natl Acad Sci U S A (2005) 1.11
The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I. EMBO J (2008) 0.95
Phage-type RNA polymerase RPOTmp transcribes the rrn operon from the PC promoter at early developmental stages in Arabidopsis. Plant Physiol (2007) 0.95
Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system. Nucleic Acids Res (2005) 0.91
TFIIB-related factors in RNA polymerase I transcription. Biochim Biophys Acta (2012) 0.89
The Agrobacterium VirE3 effector protein: a potential plant transcriptional activator. Nucleic Acids Res (2006) 0.85
Dual localized mitochondrial and nuclear proteins as gene expression regulators in plants? Front Plant Sci (2012) 0.84
A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control. PLoS One (2011) 0.84
Emergence and expansion of TFIIB-like factors in the plant kingdom. Gene (2013) 0.79
Emerging knowledge of the organelle outer membranes - research snapshots and an updated list of the chloroplast outer envelope proteins. Front Plant Sci (2015) 0.76
The Arabidopsis transcription factor IIB-related protein BRP4 is involved in the regulation of mitotic cell-cycle progression during male gametogenesis. J Exp Bot (2014) 0.76
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature (2000) 70.33
GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J (1987) 57.37
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol (2000) 22.77
Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells. Science (2002) 18.89
ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci (1999) 9.82
PEST sequences and regulation by proteolysis. Trends Biochem Sci (1996) 8.90
In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. Methods Mol Biol (1998) 8.67
Regulated intramembrane proteolysis: a control mechanism conserved from bacteria to humans. Cell (2000) 8.29
Targeted destabilization of HY5 during light-regulated development of Arabidopsis. Nature (2000) 7.43
The general transcription factors of RNA polymerase II. Genes Dev (1996) 7.15
SREBP-1, a membrane-bound transcription factor released by sterol-regulated proteolysis. Cell (1994) 7.10
The role of general initiation factors in transcription by RNA polymerase II. Trends Biochem Sci (1996) 7.00
Improved detection of helix-turn-helix DNA-binding motifs in protein sequences. Nucleic Acids Res (1990) 6.99
Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell (2000) 6.16
Signal transduction by the TGF-beta superfamily. Science (2002) 5.61
TBP, a universal eukaryotic transcription factor? Genes Dev (1993) 5.61
Cytokine signaling in 2002: new surprises in the Jak/Stat pathway. Cell (2002) 5.44
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature (1999) 5.03
Crystal structure of a TFIIB-TBP-TATA-element ternary complex. Nature (1995) 4.93
Isolation and properties of the envelope of spinach chloroplasts. J Biol Chem (1973) 4.35
Interactions of the COP9 signalosome with the E3 ubiquitin ligase SCFTIRI in mediating auxin response. Science (2001) 3.87
DNA topology and a minimal set of basal factors for transcription by RNA polymerase II. Cell (1993) 3.77
Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID, and IIB during formation of a transcription-competent complex. Mol Cell Biol (1990) 3.72
Cloning of a human gene encoding the general transcription initiation factor IIB. Nature (1991) 3.67
Common themes in assembly and function of eukaryotic transcription complexes. Annu Rev Biochem (1995) 3.60
G-protein signaling through tubby proteins. Science (2001) 3.59
Gene transfer from organelles to the nucleus: how much, what happens, and Why? Plant Physiol (1998) 3.51
New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB. Genes Dev (1998) 3.45
Arabidopsis COP8, COP10, and COP11 genes are involved in repression of photomorphogenic development in darkness. Plant Cell (1994) 2.89
Exchange of protein molecules through connections between higher plant plastids. Science (1997) 2.85
Protein import and routing systems of chloroplasts. Plant Cell (1999) 2.84
Proteasome-dependent degradation of the human estrogen receptor. Proc Natl Acad Sci U S A (1999) 2.81
Regulation of interferon-gamma-activated STAT1 by the ubiquitin-proteasome pathway. Science (1996) 2.66
Plant development: regulation by protein degradation. Science (2002) 2.64
Requirement of tissue-selective TBP-associated factor TAFII105 in ovarian development. Science (2001) 2.59
Participation of nuclear genes in chloroplast gene expression. Biochimie (2000) 2.50
The origin of the eukaryotic cell. Trends Biochem Sci (1996) 2.40
The 5'-proximal region of the wheat Cab-1 gene contains a 268-bp enhancer-like sequence for phytochrome response. EMBO J (1987) 2.31
The chloroplast chromosomes in land plants. Annu Rev Cell Biol (1989) 2.27
Incorporation of non-local interactions in protein secondary structure prediction from the amino acid sequence. Protein Eng (1996) 2.24
A FUSCA gene of Arabidopsis encodes a novel protein essential for plant development. Plant Cell (1994) 2.20
A yeast TFIIB-related factor involved in RNA polymerase III transcription. Genes Dev (1992) 2.17
Origin and evolution of organelle genomes. Curr Opin Genet Dev (1993) 2.13
A suppressor of TBP mutations encodes an RNA polymerase III transcription factor with homology to TFIIB. Cell (1992) 2.12
Spermiogenesis deficiency in mice lacking the Trf2 gene. Science (2001) 1.99
PCF4 encodes an RNA polymerase III transcription factor with homology to TFIIB. Cell (1992) 1.97
Human TAFII 105 is a cell type-specific TFIID subunit related to hTAFII130. Cell (1996) 1.96
Late arrest of spermiogenesis and germ cell apoptosis in mice lacking the TBP-like TLF/TRF2 gene. Mol Cell (2001) 1.94
Arabidopsis thaliana contains two genes for TFIID. Nature (1990) 1.92
Developmental regulation of transcription by a tissue-specific TAF homolog. Genes Dev (2001) 1.92
COP9 signalosome revisited: a novel mediator of protein degradation. Trends Cell Biol (2001) 1.80
Localization of polypeptides to the cytosolic side of the outer envelope membrane of spinach chloroplasts. J Biol Chem (1983) 1.76
Solution structure of the C-terminal core domain of human TFIIB: similarity to cyclin A and interaction with TATA-binding protein. Cell (1995) 1.75
Heat shock response and protein degradation: regulation of HSF2 by the ubiquitin-proteasome pathway. Mol Cell Biol (1998) 1.74
The plant translational apparatus. Plant Mol Biol (1996) 1.72
Membrane-bound transcription factors: regulated release by RIP or RUP. Curr Opin Cell Biol (2001) 1.61
Different human TFIIIB activities direct RNA polymerase III transcription from TATA-containing and TATA-less promoters. Genes Dev (2000) 1.61
A TRF1:BRF complex directs Drosophila RNA polymerase III transcription. Cell (2000) 1.59
Pathways of plastid-to-nucleus signaling. Trends Plant Sci (2001) 1.54
Signal transduction between the chloroplast and the nucleus. Plant Cell (2002) 1.53
Evidence for FUS6 as a component of the nuclear-localized COP9 complex in Arabidopsis. Plant Cell (1996) 1.43
The TBP-like factor: an alternative transcription factor in metazoa? Trends Biochem Sci (1999) 1.33
Preparation and characterization of envelope membranes from nongreen plastids. Plant Physiol (1988) 1.30
A stable complex of a novel transcription factor IIB- related factor, human TFIIIB50, and associated proteins mediate selective transcription by RNA polymerase III of genes with upstream promoter elements. Proc Natl Acad Sci U S A (2000) 1.26
Identification of a general transcription factor TFIIAalpha/beta homolog selectively expressed in testis. J Biol Chem (1999) 1.23
Two small subunits in Arabidopsis RNA polymerase II are related to yeast RPB4 and RPB7 and interact with one another. J Biol Chem (1998) 1.22
Preparation of physiologically active chloroplasts from Arabidopsis. Methods Mol Biol (1998) 1.20
Characterization of Arabidopsis plastid sigma-like transcription factors SIG1, SIG2 and SIG3. Plant Mol Biol (2003) 1.18
Characterization of a protein binding sequence in the promoter region of the 16S rRNA gene of the spinach chloroplast genome. Nucleic Acids Res (1991) 1.14
Transcription in Archaea. Cold Spring Harb Symp Quant Biol (1998) 1.13
TBP-like factors come into focus. Cell (2000) 1.13
Arabidopsis thaliana RNA polymerase II subunits related to yeast and human RPB5. Gene (1999) 1.02
A minimal RNA polymerase III transcription system. EMBO J (1999) 0.99
A testis-specific transcription factor IIA (TFIIAtau) stimulates TATA-binding protein-DNA binding and transcription activation. J Biol Chem (2000) 0.97
The nuclear RPL4 gene encodes a chloroplast protein that co-purifies with the T7-like transcription complex as well as plastid ribosomes. J Biol Chem (1998) 0.93
Characterization and functional analysis of Arabidopsis TFIIA reveal that the evolutionarily unconserved region of the large subunit has a transcription activation domain. Plant Mol Biol (1999) 0.89
Isolation and characterization of cDNAs encoding transcription factor IIB from Arabidopsis and soybean. Plant J (1996) 0.87
Expression of the two maize TATA binding protein genes and function of the encoded TBP proteins by complementation in yeast. Plant Cell (1993) 0.82
Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis. Genes Dev (2005) 4.50
In vivo expression and functional characterization of the zinc transporter ZnT8 in glucose-induced insulin secretion. J Cell Sci (2006) 3.82
Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components. Genes Dev (2007) 3.75
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II. Cell (2005) 3.66
Regulation of BRCC, a holoenzyme complex containing BRCA1 and BRCA2, by a signalosome-like subunit and its role in DNA repair. Mol Cell (2003) 2.90
The Near Eastern origin of cat domestication. Science (2007) 2.90
Functional interplay between histone demethylase and deacetylase enzymes. Mol Cell Biol (2006) 2.20
Phytotoxicity and innate immune responses induced by Nep1-like proteins. Plant Cell (2006) 1.88
An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature (2010) 1.82
Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein. Genes Dev (2010) 1.80
RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family. EMBO Rep (2009) 1.75
Quantitative phase tomography of Arabidopsis seeds reveals intercellular void network. Proc Natl Acad Sci U S A (2006) 1.73
Histone-modifying complexes regulate gene expression pertinent to the differentiation of the protozoan parasite Toxoplasma gondii. Mol Cell Biol (2005) 1.72
Two Arabidopsis metacaspases AtMCP1b and AtMCP2b are arginine/lysine-specific cysteine proteases and activate apoptosis-like cell death in yeast. J Biol Chem (2005) 1.62
Central vs. bilateral endoscopic ultrasound-guided celiac plexus block or neurolysis: a comparative study of short-term effectiveness. Am J Gastroenterol (2009) 1.62
Integral membrane proteins of the chloroplast envelope: identification and subcellular localization of new transporters. Proc Natl Acad Sci U S A (2002) 1.58
Arabidopsis Bax inhibitor-1 functions as an attenuator of biotic and abiotic types of cell death. Plant J (2006) 1.49
BAX inhibitor-1 modulates endoplasmic reticulum stress-mediated programmed cell death in Arabidopsis. J Biol Chem (2007) 1.48
PolV(PolIVb) function in RNA-directed DNA methylation requires the conserved active site and an additional plant-specific subunit. Proc Natl Acad Sci U S A (2009) 1.43
The importance of process issues as predictors of time to endoscopy in patients with acute upper-GI bleeding using the RUGBE data. Gastrointest Endosc (2006) 1.41
Generation time: a reliable metric to measure life-history variation among mammalian populations. Am Nat (2005) 1.37
Non-canonical transit peptide for import into the chloroplast. J Biol Chem (2002) 1.36
HMA1, a new Cu-ATPase of the chloroplast envelope, is essential for growth under adverse light conditions. J Biol Chem (2005) 1.36
Identification in pea seed mitochondria of a late-embryogenesis abundant protein able to protect enzymes from drying. Plant Physiol (2004) 1.33
Host cell subversion by Toxoplasma GRA16, an exported dense granule protein that targets the host cell nucleus and alters gene expression. Cell Host Microbe (2013) 1.29
A Toxoplasma dense granule protein, GRA24, modulates the early immune response to infection by promoting a direct and sustained host p38 MAPK activation. J Exp Med (2013) 1.28
A complex small RNA repertoire is generated by a plant/fungal-like machinery and effected by a metazoan-like Argonaute in the single-cell human parasite Toxoplasma gondii. PLoS Pathog (2010) 1.27
Testing for phylogenetic signal in phenotypic traits: new matrices of phylogenetic proximities. Theor Popul Biol (2007) 1.26
The Arabidopsis nuclear DAL gene encodes a chloroplast protein which is required for the maturation of the plastid ribosomal RNAs and is essential for chloroplast differentiation. Plant Mol Biol (2003) 1.20
Arabidopsis metacaspase 2d is a positive mediator of cell death induced during biotic and abiotic stresses. Plant J (2011) 1.20
Histone mediated gene activation in Toxoplasma gondii. Mol Biochem Parasitol (2006) 1.19
Characterization of Arabidopsis plastid sigma-like transcription factors SIG1, SIG2 and SIG3. Plant Mol Biol (2003) 1.18
Critical role of connexin 43 in secondary expansion of traumatic spinal cord injury. J Neurosci (2012) 1.18
The twin spot generator for differential Drosophila lineage analysis. Nat Methods (2009) 1.17
SET8-mediated methylations of histone H4 lysine 20 mark silent heterochromatic domains in apicomplexan genomes. Mol Cell Biol (2007) 1.17
Emergence and prevalence of human vector-borne diseases in sink vector populations. PLoS One (2012) 1.16
Maurocalcine and domain A of the II-III loop of the dihydropyridine receptor Cav 1.1 subunit share common binding sites on the skeletal ryanodine receptor. J Biol Chem (2004) 1.15
Recruitment of MLL by HMG-domain protein iBRAF promotes neural differentiation. Nat Cell Biol (2005) 1.15
Cited2, a coactivator of HNF4alpha, is essential for liver development. EMBO J (2007) 1.14
Linking transcriptional elongation and messenger RNA export to metastatic breast cancers. Cancer Res (2005) 1.09
Specific function of a plastid sigma factor for ndhF gene transcription. Nucleic Acids Res (2005) 1.09
Factors associated with incomplete small bowel capsule endoscopy studies. World J Gastroenterol (2010) 1.09
Antibodies to Aleutian mink disease parvovirus in free-ranging European mink (Mustela lutreola) and other small carnivores from southwestern France. J Wildl Dis (2004) 1.08
Drug inhibition of HDAC3 and epigenetic control of differentiation in Apicomplexa parasites. J Exp Med (2009) 1.08
The RNA-binding proteins CSP41a and CSP41b may regulate transcription and translation of chloroplast-encoded RNAs in Arabidopsis. Plant Mol Biol (2008) 1.07
Putting phylogeny into the analysis of biological traits: a methodological approach. J Theor Biol (2010) 1.07
Nucleus-encoded plastid sigma factor SIG3 transcribes specifically the psbN gene in plastids. Nucleic Acids Res (2006) 1.06
Transduction of the scorpion toxin maurocalcine into cells. Evidence that the toxin crosses the plasma membrane. J Biol Chem (2005) 1.06
The canine distemper epidemic in Serengeti: are lions victims of a new highly virulent canine distemper virus strain, or is pathogen circulation stochasticity to blame? J R Soc Interface (2007) 1.06
Tandem repetitive transgenes and fluorescent chromatin tags alter local interphase chromosome arrangement in Arabidopsis thaliana. J Cell Sci (2005) 1.06
Toc159- and Toc75-independent import of a transit sequence-less precursor into the inner envelope of chloroplasts. J Biol Chem (2007) 1.06
Safety and efficacy of Hemospray® in upper gastrointestinal bleeding. Can J Gastroenterol Hepatol (2014) 1.05
Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions. Mol Cell (2012) 1.04
An ABC transporter and an outer membrane lipoprotein participate in posttranslational activation of type VI secretion in Pseudomonas aeruginosa. Environ Microbiol (2012) 1.04
Recent advance in the study of caspase-like proteases and Bax inhibitor-1 in plants: their possible roles as regulator of programmed cell death. Mol Plant Pathol (2004) 1.02
Unexpected heterozygosity in an island mouflon population founded by a single pair of individuals. Proc Biol Sci (2007) 1.02
Spectral profiling for the simultaneous observation of four distinct fluorescent proteins and detection of protein-protein interaction via fluorescence resonance energy transfer in tobacco leaf nuclei. Plant Physiol (2002) 1.02
TM9SF4 is required for Drosophila cellular immunity via cell adhesion and phagocytosis. J Cell Sci (2008) 1.02
The small ubiquitin-like modifier (SUMO)-conjugating system of Toxoplasma gondii. Int J Parasitol (2008) 1.01
Epigenetic mechanisms regulate stage differentiation in the minimized protozoan Giardia lamblia. Mol Microbiol (2010) 0.99
Cyclin-dependent kinase 5 activity is required for T cell activation and induction of experimental autoimmune encephalomyelitis. J Exp Med (2010) 0.99
Lymphoepithelial cysts of the pancreas: the use of endoscopic ultrasound-guided fine-needle aspiration in diagnosis. Can J Gastroenterol (2010) 0.98
Building up of the plastid transcriptional machinery during germination and early plant development. Plant Physiol (2006) 0.98
Expression of the baculovirus p35 protein in tobacco affects cell death progression and compromises N gene-mediated disease resistance response to Tobacco mosaic virus. Mol Plant Microbe Interact (2003) 0.98
Chromatin modifications: implications in the regulation of gene expression in Toxoplasma gondii. Cell Microbiol (2010) 0.96
Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis. Nucleic Acids Res (2010) 0.96
Calcium-dependent activation and autolysis of Arabidopsis metacaspase 2d. J Biol Chem (2011) 0.96
Bold attitude makes male urban feral domestic cats more vulnerable to Feline Immunodeficiency Virus. Neurosci Biobehav Rev (2004) 0.95
Bax Inhibitor-1, a conserved cell death suppressor, is a key molecular switch downstream from a variety of biotic and abiotic stress signals in plants. Int J Mol Sci (2009) 0.95
IQGAP1 regulates adult neural progenitors in vivo and vascular endothelial growth factor-triggered neural progenitor migration in vitro. J Neurosci (2007) 0.95
Phage-type RNA polymerase RPOTmp transcribes the rrn operon from the PC promoter at early developmental stages in Arabidopsis. Plant Physiol (2007) 0.95
Epithelial protein lost in neoplasm (EPLIN) interacts with α-catenin and actin filaments in endothelial cells and stabilizes vascular capillary network in vitro. J Biol Chem (2011) 0.94
Genome-wide transposon tagging reveals location-dependent effects on transcription and chromatin organization in Arabidopsis. Plant J (2008) 0.94
Chromatin of endoreduplicated pavement cells has greater range of movement than that of diploid guard cells in Arabidopsis thaliana. J Cell Sci (2003) 0.93
Plant lipid-associated fibrillin proteins condition jasmonate production under photosynthetic stress. Plant J (2009) 0.92
A nucleus-encoded maize protein with sigma factor activity accumulates in mitochondria and chloroplasts. Plant J (2002) 0.92
Leu505 of Nox2 is crucial for optimal p67phox-dependent activation of the flavocytochrome b558 during phagocytic NADPH oxidase assembly. J Leukoc Biol (2006) 0.92
The plastid division proteins, FtsZ1 and FtsZ2, differ in their biochemical properties and sub-plastidial localization. Biochem J (2005) 0.92
Hypertriglyceridemia in lecithin-cholesterol acyltransferase-deficient mice is associated with hepatic overproduction of triglycerides, increased lipogenesis, and improved glucose tolerance. J Biol Chem (2003) 0.91
A truncated hepatitis E virus ORF2 protein expressed in tobacco plastids is immunogenic in mice. World J Gastroenterol (2006) 0.91
Endoscopic mucosal resection: early experience in British Columbia. Can J Gastroenterol (2010) 0.90
Impact of myxomatosis in relation to local persistence in wild rabbit populations: the role of waning immunity and the reproductive period. J Theor Biol (2007) 0.90
Biliary brush cytology: factors associated with positive yields on biliary brush cytology. World J Gastroenterol (2008) 0.89
Duckweed rising at Chengdu: summary of the 1st International Conference on Duckweed Application and Research. Plant Mol Biol (2012) 0.89
Regulation of NADPH oxidase activity in phagocytes: relationship between FAD/NADPH binding and oxidase complex assembly. J Biol Chem (2010) 0.89
ANCORP: a high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets. Plant J (2010) 0.89
Fission yeast homologs of human histone H3 lysine 4 demethylase regulate a common set of genes with diverse functions. J Biol Chem (2006) 0.88
Modeling transmission of directly transmitted infectious diseases using colored stochastic Petri nets. Math Biosci (2003) 0.88
Pdro, a protein associated with late endosomes and lysosomes and implicated in cellular cholesterol homeostasis. PLoS One (2010) 0.88
Cavbeta-subunit displacement is a key step to induce the reluctant state of P/Q calcium channels by direct G protein regulation. Proc Natl Acad Sci U S A (2004) 0.88
Disease propagation in connected host populations with density-dependent dynamics: the case of the Feline Leukemia Virus. J Theor Biol (2003) 0.88
DNA hypomethylation reduces homologous pairing of inserted tandem repeat arrays in somatic nuclei of Arabidopsis thaliana. Plant J (2005) 0.87
Cell-specific regulation of nucleic acid sensor cascades: a controlling interest in the antiviral response. J Virol (2012) 0.87
Intraplastidial trafficking of a phage-type RNA polymerase is mediated by a thylakoid RING-H2 protein. Proc Natl Acad Sci U S A (2008) 0.87
Size and number of tandem repeat arrays can determine somatic homologous pairing of transgene loci mediated by epigenetic modifications in Arabidopsis thaliana nuclei. Chromosoma (2008) 0.87
Human prion protein binds Argonaute and promotes accumulation of microRNA effector complexes. Nat Struct Mol Biol (2012) 0.87