Published in Biochemistry on May 06, 2003
Surface sites for engineering allosteric control in proteins. Science (2008) 2.82
Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds. Proc Natl Acad Sci U S A (2005) 2.27
Structural basis for PAS domain heterodimerization in the basic helix--loop--helix-PAS transcription factor hypoxia-inducible factor. Proc Natl Acad Sci U S A (2003) 2.09
Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data. Proc Natl Acad Sci U S A (2004) 1.28
Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein. Proc Natl Acad Sci U S A (2006) 1.25
Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy. Biophys J (2004) 1.24
PAS domain allostery and light-induced conformational changes in photoactive yellow protein upon I2 intermediate formation, probed with enhanced hydrogen/deuterium exchange mass spectrometry. J Mol Biol (2006) 1.17
Hydrogen bond dynamics in the active site of photoactive yellow protein. Proc Natl Acad Sci U S A (2009) 1.04
Structural evolution of the chromophore in the primary stages of trans/cis isomerization in photoactive yellow protein. J Am Chem Soc (2005) 1.04
Changes in quaternary structure in the signaling mechanisms of PAS domains. Biochemistry (2008) 1.03
Photoisomerization and photoionization of the photoactive yellow protein chromophore in solution. Biophys J (2004) 1.02
Axis-dependent anisotropy in protein unfolding from integrated nonequilibrium single-molecule experiments, analysis, and simulation. Proc Natl Acad Sci U S A (2007) 0.98
Dynamical transition and proteinquake in photoactive yellow protein. Proc Natl Acad Sci U S A (2004) 0.95
Role of a conserved salt bridge between the PAS core and the N-terminal domain in the activation of the photoreceptor photoactive yellow protein. Biophys J (2007) 0.93
Contrasting the excited-state dynamics of the photoactive yellow protein chromophore: protein versus solvent environments. Biophys J (2004) 0.91
Primary steps of the photoactive yellow protein: isolated chromophore dynamics and protein directed function. Proc Natl Acad Sci U S A (2006) 0.87
Conformational changes of PYP monitored by diffusion coefficient: effect of N-terminal alpha-helices. Biophys J (2006) 0.87
Conformational changes in the N-terminal region of photoactive yellow protein: a time-resolved diffusion study. Biophys J (2007) 0.84
The transient accumulation of the signaling state of photoactive yellow protein is controlled by the external pH. Biophys J (2006) 0.84
Heme ligand binding properties and intradimer interactions in the full-length sensor protein dos from Escherichia coli and its isolated heme domain. J Biol Chem (2009) 0.83
Probing early events in ferrous cytochrome c folding with time-resolved natural and magnetic circular dichroism spectroscopies. Curr Protein Pept Sci (2009) 0.82
Complete genome sequence of Halorhodospira halophila SL1. Stand Genomic Sci (2013) 0.81
Diverse roles of glycine residues conserved in photoactive yellow proteins. Biophys J (2008) 0.80
A conserved helical capping hydrogen bond in PAS domains controls signaling kinetics in the superfamily prototype photoactive yellow protein. J Am Chem Soc (2010) 0.79
Combined probes of X-ray scattering and optical spectroscopy reveal how global conformational change is temporally and spatially linked to local structural perturbation in photoactive yellow protein. Phys Chem Chem Phys (2016) 0.79
Strong ionic hydrogen bonding causes a spectral isotope effect in photoactive yellow protein. Biophys J (2013) 0.78
Purification and reconstitution of PYP-phytochrome with biliverdin and 4-hydroxycinnamic acid. Methods Enzymol (2007) 0.76
On the involvement of single-bond rotation in the primary photochemistry of photoactive yellow protein. Biophys J (2011) 0.75
Identification, cloning and expression of a Cry1Ab cadherin receptor from European corn borer, Ostrinia nubilalis (Hubner) (Lepidoptera: Crambidae). Insect Biochem Mol Biol (2005) 1.13
Photoactive yellow protein, bacteriophytochrome, and sensory rhodopsin in purple phototrophic bacteria. Photochem Photobiol Sci (2004) 0.91
Photoreversal kinetics of the I1 and I2 intermediates in the photocycle of photoactive yellow protein by double flash experiments with variable time delay. Biochemistry (2005) 0.87
Effect of salt and pH on the activation of photoactive yellow protein and gateway mutants Y98Q and Y98F. Biochemistry (2005) 0.86
Photocycle and photoreversal of photoactive yellow protein at alkaline pH: kinetics, intermediates, and equilibria. Biochemistry (2006) 0.85
Time-resolved single tryptophan fluorescence in photoactive yellow protein monitors changes in the chromophore structure during the photocycle via energy transfer. Biochemistry (2005) 0.83
Strong hydrogen bond between glutamic acid 46 and chromophore leads to the intermediate spectral form and excited state proton transfer in the Y42F mutant of the photoreceptor photoactive yellow protein. Biochemistry (2009) 0.81
Regulation of the Ppr histidine kinase by light-induced interactions between its photoactive yellow protein and bacteriophytochrome domains. Biochemistry (2010) 0.79
Thermochromatium tepidum photoactive yellow protein/bacteriophytochrome/diguanylate cyclase: characterization of the PYP domain. Biochemistry (2005) 0.78
Characterization of the interaction of Rhodobacter capsulatus cytochrome c peroxidase with charge reversal mutants of cytochrome c(2). Arch Biochem Biophys (2003) 0.77
Structural role of tyrosine 98 in photoactive yellow protein: effects on fluorescence, gateway, and photocycle recovery. Biochemistry (2007) 0.77
The photoactivated PYP domain of Rhodospirillum centenum Ppr accelerates the recovery of the bacteriophytochrome domain after white light illumination. Biochemistry (2007) 0.77
Photokinetic, biochemical and structural features of chimeric photoactive yellow protein constructs. Photochem Photobiol (2012) 0.76
Tyrosine triad at the interface between the Rieske iron-sulfur protein, cytochrome c1 and cytochrome c2 in the bc1 complex of Rhodobacter capsulatus. Biochim Biophys Acta (2012) 0.75