Published in Plant Mol Biol on September 01, 2003
Biochemistry and evolution of anaerobic energy metabolism in eukaryotes. Microbiol Mol Biol Rev (2012) 2.65
Diversity and Evolutionary Analysis of Iron-Containing (Type-III) Alcohol Dehydrogenases in Eukaryotes. PLoS One (2016) 1.40
Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes. BMC Evol Biol (2006) 1.17
Energy metabolism among eukaryotic anaerobes in light of Proterozoic ocean chemistry. Philos Trans R Soc Lond B Biol Sci (2008) 1.11
Integrating horizontal gene transfer and common descent to depict evolution and contrast it with "common design". J Eukaryot Microbiol (2009) 1.05
The chloroplast proteome: a survey from the Chlamydomonas reinhardtii perspective with a focus on distinctive features. Curr Genet (2011) 1.05
A mutant in the ADH1 gene of Chlamydomonas reinhardtii elicits metabolic restructuring during anaerobiosis. Plant Physiol (2012) 0.90
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New insights into the unique structure of the F0F1-ATP synthase from the chlamydomonad algae Polytomella sp. and Chlamydomonas reinhardtii. Plant Physiol (2007) 0.83
Enzymes of the heme biosynthetic pathway in the nonphotosynthetic alga Polytomella sp. Eukaryot Cell (2005) 0.78
Identification of the Elusive Pyruvate Reductase of Chlamydomonas reinhardtii Chloroplasts. Plant Cell Physiol (2015) 0.77
Concerted Up-regulation of Aldehyde/Alcohol Dehydrogenase (ADHE) and Starch in Chlamydomonas reinhardtii Increases Survival under Dark Anoxia. J Biol Chem (2016) 0.75
Redox Balance in Lactobacillus reuteri DSM20016: Roles of Iron-Dependent Alcohol Dehydrogenases in Glucose/ Glycerol Metabolism. PLoS One (2016) 0.75
The oxidative fermentation of ethanol in Gluconacetobacter diazotrophicus is a two-step pathway catalyzed by a single enzyme: alcohol-aldehyde Dehydrogenase (ADHa). Int J Mol Sci (2015) 0.75
Both adhE and a separate NADPH-dependent alcohol dehydrogenase (adhA) are necessary for high ethanol production in Thermoanaerobacterium saccharolyticum. J Bacteriol (2016) 0.75
Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision. Trends Genet (2004) 17.22
The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science (2007) 11.15
Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. PLoS Biol (2004) 7.95
Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes. Nat Rev Genet (2004) 5.51
Eukaryotic evolution, changes and challenges. Nature (2006) 5.10
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science (2007) 4.89
The energetics of genome complexity. Nature (2010) 4.58
Genetics and geography of wild cereal domestication in the near east. Nat Rev Genet (2002) 3.30
Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution. Proc Natl Acad Sci U S A (2008) 2.97
Molecular poltergeists: mitochondrial DNA copies (numts) in sequenced nuclear genomes. PLoS Genet (2010) 2.70
Biochemistry and evolution of anaerobic energy metabolism in eukaryotes. Microbiol Mol Biol Rev (2012) 2.65
Activation of natural regulatory T cells by IgG Fc-derived peptide "Tregitopes". Blood (2008) 2.50
The evolutionary root of flowering plants. Syst Biol (2012) 2.46
A genome phylogeny for mitochondria among alpha-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes. Mol Biol Evol (2004) 2.32
The tree of one percent. Genome Biol (2006) 2.23
Prokaryotic evolution and the tree of life are two different things. Biol Direct (2009) 2.17
On the origin of genomes and cells within inorganic compartments. Trends Genet (2005) 2.04
Ancestral genome sizes specify the minimum rate of lateral gene transfer during prokaryote evolution. Proc Natl Acad Sci U S A (2007) 1.96
The rocky roots of the acetyl-CoA pathway. Trends Biochem Sci (2004) 1.92
A green algal apicoplast ancestor. Science (2002) 1.85
Optimizing esthetics for implant restorations in the anterior maxilla: anatomic and surgical considerations. Int J Oral Maxillofac Implants (2004) 1.84
Acceleration of genomic evolution caused by enhanced mutation rate in endocellular symbionts. Proc Natl Acad Sci U S A (2002) 1.79
Phylogenomic analysis of the Giardia intestinalis transcarboxylase reveals multiple instances of domain fusion and fission in the evolution of biotin-dependent enzymes. J Mol Microbiol Biotechnol (2003) 1.76
Reducing risk, improving outcomes: bioengineering less immunogenic protein therapeutics. Clin Immunol (2009) 1.73
Genes of cyanobacterial origin in plant nuclear genomes point to a heterocyst-forming plastid ancestor. Mol Biol Evol (2008) 1.62
Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes. Genome Res (2011) 1.58
HIV vaccine development by computer assisted design: the GAIA vaccine. Vaccine (2005) 1.56
Mitochondria as we don't know them. Trends Biochem Sci (2002) 1.49
Haplotype structure at seven barley genes: relevance to gene pool bottlenecks, phylogeny of ear type and site of barley domestication. Mol Genet Genomics (2006) 1.49
Testing hypotheses without considering predictions. Bioessays (2007) 1.48
A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales. Plant Cell (2003) 1.46
Immuno-informatics: Mining genomes for vaccine components. Immunol Cell Biol (2002) 1.46
Utility of the neutrophil to lymphocyte ratio in predicting long-term outcomes in acute decompensated heart failure. Am J Cardiol (2011) 1.44
Networks of gene sharing among 329 proteobacterial genomes reveal differences in lateral gene transfer frequency at different phylogenetic depths. Mol Biol Evol (2010) 1.42
A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds new light on the metabolic plasticity of the organelle and on the nature of the alpha-proteobacterial mitochondrial ancestor. Mol Biol Evol (2009) 1.41
Prognosis of endodontically treated teeth? Point. Quintessence Int (2003) 1.39
Low immunogenicity predicted for emerging avian-origin H7N9: implication for influenza vaccine design. Hum Vaccin Immunother (2013) 1.38
Single eubacterial origin of eukaryotic sulfide:quinone oxidoreductase, a mitochondrial enzyme conserved from the early evolution of eukaryotes during anoxic and sulfidic times. Mol Biol Evol (2003) 1.37
How did LUCA make a living? Chemiosmosis in the origin of life. Bioessays (2010) 1.33
A positive definition of prokaryotes. Nature (2006) 1.29
Specific and differential inhibition of very-long-chain fatty acid elongases from Arabidopsis thaliana by different herbicides. Proc Natl Acad Sci U S A (2004) 1.28
Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes. Plant Physiol (2005) 1.27
The origin of mitochondria in light of a fluid prokaryotic chromosome model. Biol Lett (2007) 1.25
Evolutionary biology: essence of mitochondria. Nature (2003) 1.25
Transcriptomic evidence that longevity of acquired plastids in the photosynthetic slugs Elysia timida and Plakobranchus ocellatus does not entail lateral transfer of algal nuclear genes. Mol Biol Evol (2010) 1.24
Was nitric oxide the first deep electron sink? Trends Biochem Sci (2008) 1.24
Pyruvate formate-lyase and a novel route of eukaryotic ATP synthesis in Chlamydomonas mitochondria. J Biol Chem (2006) 1.22
Mycobacterium tuberculosis glycoproteomics based on ConA-lectin affinity capture of mannosylated proteins. J Proteome Res (2009) 1.20
Networks uncover hidden lexical borrowing in Indo-European language evolution. Proc Biol Sci (2010) 1.18
Getting a better picture of microbial evolution en route to a network of genomes. Philos Trans R Soc Lond B Biol Sci (2009) 1.15
Coupling sensitive in vitro and in silico techniques to assess cross-reactive CD4(+) T cells against the swine-origin H1N1 influenza virus. Vaccine (2011) 1.14
166Ho-DOTMP radiation-absorbed dose estimation for skeletal targeted radiotherapy. J Nucl Med (2006) 1.14
Evolution of the enzymes of the citric acid cycle and the glyoxylate cycle of higher plants. A case study of endosymbiotic gene transfer. Eur J Biochem (2002) 1.12
Acetate formation in the energy metabolism of parasitic helminths and protists. Int J Parasitol (2010) 1.11
Energy metabolism among eukaryotic anaerobes in light of Proterozoic ocean chemistry. Philos Trans R Soc Lond B Biol Sci (2008) 1.11
HelicoVax: epitope-based therapeutic Helicobacter pylori vaccination in a mouse model. Vaccine (2011) 1.09
Bacterial-type oxygen detoxification and iron-sulfur cluster assembly in amoebal relict mitochondria. Cell Microbiol (2009) 1.09
Evolutionary biology: out of thin air. Nature (2007) 1.09
Mapping cross-clade HIV-1 vaccine epitopes using a bioinformatics approach. Vaccine (2003) 1.07
Utility of FDG-PET/CT in follow-up of children treated for Hodgkin and non-Hodgkin lymphoma. J Pediatr Hematol Oncol (2006) 1.07
Purification, characterization and kinetic properties of the multifunctional thioredoxin-glutathione reductase from Taenia crassiceps metacestode (cysticerci). Mol Biochem Parasitol (2004) 1.06
Epitope-based vaccination against pneumonic tularemia. Vaccine (2009) 1.05
Difficulties in testing for covarion-like properties of sequences under the confounding influence of changing proportions of variable sites. Mol Biol Evol (2008) 1.04
The difference between organelles and endosymbionts. Curr Biol (2006) 1.03
The typically mitochondrial DNA-encoded ATP6 subunit of the F1F0-ATPase is encoded by a nuclear gene in Chlamydomonas reinhardtii. J Biol Chem (2001) 1.03
Carvedilol alone or in combination with digoxin for the management of atrial fibrillation in patients with heart failure? J Am Coll Cardiol (2003) 1.02
Genome networks root the tree of life between prokaryotic domains. Genome Biol Evol (2010) 1.02
Epitope-driven TB vaccine development: a streamlined approach using immuno-informatics, ELISpot assays, and HLA transgenic mice. Curr Mol Med (2007) 1.02
Identification of novel mitochondrial protein components of Chlamydomonas reinhardtii. A proteomic approach. Plant Physiol (2003) 1.01
Sulfide : quinone oxidoreductase (SQR) from the lugworm Arenicola marina shows cyanide- and thioredoxin-dependent activity. FEBS J (2008) 1.00
Making vaccines "on demand": a potential solution for emerging pathogens and biodefense? Hum Vaccin Immunother (2013) 1.00
Engineering immunogenic consensus T helper epitopes for a cross-clade HIV vaccine. Methods (2004) 1.00
Fe-hydrogenase maturases in the hydrogenosomes of Trichomonas vaginalis. Eukaryot Cell (2006) 1.00
The ineluctable requirement for the trans-iron elements molybdenum and/or tungsten in the origin of life. Sci Rep (2012) 0.99
Novel function of complement C3d as an autologous helper T-cell target. Immunol Cell Biol (2008) 0.99
Anaerobic energy metabolism in unicellular photosynthetic eukaryotes. Biochim Biophys Acta (2012) 0.99
Mitochondrial trans-2-enoyl-CoA reductase of wax ester fermentation from Euglena gracilis defines a new family of enzymes involved in lipid synthesis. J Biol Chem (2004) 0.98
Acetate:succinate CoA-transferase in the hydrogenosomes of Trichomonas vaginalis: identification and characterization. J Biol Chem (2007) 0.98
Interspecific evolution: microbial symbiosis, endosymbiosis and gene transfer. Environ Microbiol (2003) 0.97
ERAD components in organisms with complex red plastids suggest recruitment of a preexisting protein transport pathway for the periplastid membrane. Genome Biol Evol (2010) 0.97
Euglena gracilis rhodoquinone:ubiquinone ratio and mitochondrial proteome differ under aerobic and anaerobic conditions. J Biol Chem (2004) 0.96
Identification of immunogenic HLA-B7 "Achilles' heel" epitopes within highly conserved regions of HIV. Vaccine (2007) 0.96
Ascorbate blocks endothelium-derived hyperpolarizing factor (EDHF)-mediated vasodilatation in the bovine ciliary vascular bed and rat mesentery. Br J Pharmacol (2002) 0.96
Fructose-1,6-bisphosphate aldolases in amitochondriate protists constitute a single protein subfamily with eubacterial relationships. Gene (2002) 0.93
Rubrerythrin and peroxiredoxin: two novel putative peroxidases in the hydrogenosomes of the microaerophilic protozoon Trichomonas vaginalis. Mol Biochem Parasitol (2005) 0.93
The mitochondrial ATP synthase of chlorophycean algae contains eight subunits of unknown origin involved in the formation of an atypical stator-stalk and in the dimerization of the complex. J Bioenerg Biomembr (2006) 0.93
The evolution of eukaryotes. Science (2007) 0.93
VennVax, a DNA-prime, peptide-boost multi-T-cell epitope poxvirus vaccine, induces protective immunity against vaccinia infection by T cell response alone. Vaccine (2010) 0.92
Dietary protein intake impacts human skeletal muscle protein fractional synthetic rates after endurance exercise. Am J Physiol Endocrinol Metab (2005) 0.92
Genomic and proteomic analyses of Mycobacterium bovis BCG Mexico 1931 reveal a diverse immunogenic repertoire against tuberculosis infection. BMC Genomics (2011) 0.92