Published in J Am Med Inform Assoc on February 05, 2004
BioTagger-GM: a gene/protein name recognition system. J Am Med Inform Assoc (2008) 1.81
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks. BMC Bioinformatics (2007) 1.30
SemCat: semantically categorized entities for genomics. AMIA Annu Symp Proc (2006) 1.03
A novel biological function for CD44 in axon growth of retinal ganglion cells identified by a bioinformatics approach. J Neurochem (2007) 0.87
Tagging gene and protein names in biomedical text. Bioinformatics (2002) 10.03
A simple algorithm for identifying abbreviation definitions in biomedical text. Pac Symp Biocomput (2003) 9.78
Toward information extraction: identifying protein names from biological papers. Pac Symp Biocomput (1998) 8.17
A biological named entity recognizer. Pac Symp Biocomput (2003) 4.08
Detecting Gene Symbols and Names in Biological Texts: A First Step toward Pertinent Information Extraction. Genome Inform Ser Workshop Genome Inform (1998) 3.35
Creating an online dictionary of abbreviations from MEDLINE. J Am Med Inform Assoc (2002) 3.32
Protein names and how to find them. Int J Med Inform (2002) 3.29
Using BLAST for identifying gene and protein names in journal articles. Gene (2000) 2.13
A probabilistic model for identifying protein names and their name boundaries. Proc IEEE Comput Soc Bioinform Conf (2003) 1.15
Pathway studio--the analysis and navigation of molecular networks. Bioinformatics (2003) 4.27
Extracting human protein interactions from MEDLINE using a full-sentence parser. Bioinformatics (2004) 4.14
MedScan, a natural language processing engine for MEDLINE abstracts. Bioinformatics (2003) 2.22
Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature (2007) 2.12
Binding properties and evolution of homodimers in protein-protein interaction networks. Nucleic Acids Res (2005) 2.10
Automatic pathway building in biological association networks. BMC Bioinformatics (2006) 1.42
Draft genome sequence of the rubber tree Hevea brasiliensis. BMC Genomics (2013) 1.35
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks. BMC Bioinformatics (2007) 1.30
Pathway analysis software as a tool for drug target selection, prioritization and validation of drug mechanism. Expert Opin Ther Targets (2007) 1.12
Exploring molecular pathways of triple-negative breast cancer. Genes Cancer (2011) 1.10
Molecular networks in microarray analysis. J Bioinform Comput Biol (2007) 1.04
Novel approach to meta-analysis of microarray datasets reveals muscle remodeling-related drug targets and biomarkers in Duchenne muscular dystrophy. PLoS Comput Biol (2012) 1.02
Computational approaches for drug repositioning and combination therapy design. J Bioinform Comput Biol (2010) 1.00
Custom CGH array profiling of copy number variations (CNVs) on chromosome 6p21.32 (HLA locus) in patients with venous malformations associated with multiple sclerosis. BMC Med Genet (2010) 0.92
Pathway analysis for design of promiscuous drugs and selective drug mixtures. Curr Drug Discov Technol (2006) 0.91
Molecular signature and pathway analysis of human primary squamous and adenocarcinoma lung cancers. Am J Cancer Res (2011) 0.91
Atlas of signaling for interpretation of microarray experiments. PLoS One (2010) 0.87
Facial pain with localized and widespread manifestations: separate pathways of vulnerability. Pain (2013) 0.86
Ariadne's ChemEffect and Pathway Studio knowledge base. Expert Opin Drug Discov (2009) 0.85
Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium. Stand Genomic Sci (2012) 0.85
Experimental validation of data mined single nucleotide polymorphisms from several databases and consecutive dbSNP builds. Pharmacogenet Genomics (2006) 0.83
Analysis and construction of pathogenicity island regulatory pathways in Salmonella enterica serovar Typhi. J Integr Bioinform (2010) 0.78
Prediction of protein-protein interactions on the basis of evolutionary conservation of protein functions. Evol Bioinform Online (2007) 0.78
A systems medicine clinical platform for understanding and managing non- communicable diseases. Curr Pharm Des (2014) 0.77
Auto-validation of fluorescent primer extension genotyping assay using signal clustering and neural networks. BMC Bioinformatics (2004) 0.76
Targeting transcription factors in cell regulation. Expert Opin Ther Targets (2006) 0.75
Developing a statistical model for primer design. Methods Mol Biol (2007) 0.75