PubRank

William P Hanage

Author PubWeight™ 123.71‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Pandemic potential of a strain of influenza A (H1N1): early findings. Science 2009 26.24
2 eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. J Bacteriol 2004 17.92
3 Rapid pneumococcal evolution in response to clinical interventions. Science 2011 9.09
4 Emergence of 19A as virulent and multidrug resistant Pneumococcus in Massachusetts following universal immunization of infants with pneumococcal conjugate vaccine. Pediatr Infect Dis J 2007 3.99
5 Recombination and the nature of bacterial speciation. Science 2007 3.98
6 Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. Proc Natl Acad Sci U S A 2012 3.42
7 Continued impact of pneumococcal conjugate vaccine on carriage in young children. Pediatrics 2009 3.32
8 Variation in HIV-1 set-point viral load: epidemiological analysis and an evolutionary hypothesis. Proc Natl Acad Sci U S A 2007 3.29
9 The bacterial species challenge: making sense of genetic and ecological diversity. Science 2009 2.88
10 Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat Genet 2013 2.63
11 Displaying the relatedness among isolates of bacterial species -- the eBURST approach. FEMS Microbiol Lett 2004 2.56
12 Assigning strains to bacterial species via the internet. BMC Biol 2009 2.49
13 Neutral microepidemic evolution of bacterial pathogens. Proc Natl Acad Sci U S A 2005 2.42
14 Detection of recombination events in bacterial genomes from large population samples. Nucleic Acids Res 2011 2.41
15 Assessing the reliability of eBURST using simulated populations with known ancestry. BMC Microbiol 2007 2.36
16 Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti. MBio 2013 2.24
17 Horizontal gene transfer and the evolution of bacterial and archaeal population structure. Trends Genet 2013 1.95
18 Restricted gene flow among hospital subpopulations of Enterococcus faecium. MBio 2012 1.92
19 Identifying currents in the gene pool for bacterial populations using an integrative approach. PLoS Comput Biol 2009 1.89
20 Modelling infectious disease - time to think outside the box? Nat Rev Microbiol 2006 1.82
21 HIV-1 transmitting couples have similar viral load set-points in Rakai, Uganda. PLoS Pathog 2010 1.69
22 Population biology of Gram-positive pathogens: high-risk clones for dissemination of antibiotic resistance. FEMS Microbiol Rev 2011 1.66
23 Streptococcus pneumoniae contains 3 rlrA pilus variants that are clonally related. J Infect Dis 2008 1.49
24 Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus. Genome Biol 2012 1.45
25 Pneumococcal carriage and antibiotic resistance in young children before 13-valent conjugate vaccine. Pediatr Infect Dis J 2012 1.41
26 Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease. Vaccine 2010 1.37
27 No coexistence for free: neutral null models for multistrain pathogens. Epidemics 2008 1.37
28 Bayesian modeling of recombination events in bacterial populations. BMC Bioinformatics 2008 1.27
29 Navigating the future of bacterial molecular epidemiology. Curr Opin Microbiol 2010 1.22
30 Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen. MBio 2013 1.19
31 Re-emergence of the type 1 pilus among Streptococcus pneumoniae isolates in Massachusetts, USA. Vaccine 2010 1.12
32 Epidemiology and risk factors for Staphylococcus aureus colonization in children in the post-PCV7 era. BMC Infect Dis 2009 1.11
33 Bacterial genomes in epidemiology--present and future. Philos Trans R Soc Lond B Biol Sci 2013 1.11
34 Population structure in the Neisseria, and the biological significance of fuzzy species. J R Soc Interface 2011 1.07
35 Low effective dispersal of asexual genotypes in heterogeneous landscapes by the endemic pathogen Penicillium marneffei. PLoS Pathog 2005 1.05
36 Variable recombination dynamics during the emergence, transmission and 'disarming' of a multidrug-resistant pneumococcal clone. BMC Biol 2014 1.03
37 The important role of nontypable Streptococcus pneumoniae international clones in acute conjunctivitis. J Infect Dis 2006 0.98
38 Cryptic ecology among host generalist Campylobacter jejuni in domestic animals. Mol Ecol 2014 0.97
39 Nontypeable pneumococcal isolates among navajo and white mountain apache communities: are these really a cause of invasive disease? J Infect Dis 2012 0.95
40 Distribution of pneumococcal surface protein A families 1 and 2 among Streptococcus pneumoniae isolates from children in finland who had acute otitis media or were nasopharyngeal carriers. Clin Vaccine Immunol 2008 0.91
41 Historical zoonoses and other changes in host tropism of Staphylococcus aureus, identified by phylogenetic analysis of a population dataset. PLoS One 2013 0.90
42 A pluralistic account of homology: adapting the models to the data. Mol Biol Evol 2013 0.89
43 Pneumococcal sequence type replacement among American Indian children: a comparison of pre- and routine-PCV7 eras. Vaccine 2011 0.85
44 Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany. Proc Natl Acad Sci U S A 2012 0.78
45 Inference on population histories by approximating infinite alleles diffusion. Mol Biol Evol 2012 0.75
46 Penicillin Resistance of Nonvaccine Type Pneumococcus before and after PCV13 Introduction, United States. Emerg Infect Dis 2017 0.75