Published in J Virol on April 01, 2004
Distinct viral populations differentiate and evolve independently in a single perennial host plant. J Virol (2006) 1.28
Virus evolution and transmission in an ever more connected world. Proc Biol Sci (2015) 1.03
Diversification of rice yellow mottle virus and related viruses spans the history of agriculture from the neolithic to the present. PLoS Pathog (2008) 1.03
Rice yellow mottle virus, an RNA plant virus, evolves as rapidly as most RNA animal viruses. J Virol (2008) 0.95
Theme and variations in the evolutionary pathways to virulence of an RNA plant virus species. PLoS Pathog (2007) 0.88
An essential fifth coding ORF in the sobemoviruses. Virology (2013) 0.88
Genetic diversity and silencing suppression effects of Rice yellow mottle virus and the P1 protein. Virol J (2008) 0.78
Host ecology determines the dispersal patterns of a plant virus. Virus Evol (2015) 0.75
Internal point mutations of the capsid modify the serotype of Rice yellow mottle virus. J Virol (2005) 0.75
Mutations in Rice yellow mottle virus Polyprotein P2a Involved in RYMV2 Gene Resistance Breakdown. Front Plant Sci (2016) 0.75
Virus-Bacteria Rice Co-Infection in Africa: Field Estimation, Reciprocal Effects, Molecular Mechanisms, and Evolutionary Implications. Front Plant Sci (2017) 0.75
Rice yellow mottle virus stress responsive genes from susceptible and tolerant rice genotypes. BMC Plant Biol (2008) 0.75
Phylogeography and Coevolution of Bamboo Mosaic Virus and Its Associated Satellite RNA. Front Microbiol (2017) 0.75
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res (1994) 392.47
PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci (1997) 45.07
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol (1999) 41.48
The detection of disease clustering and a generalized regression approach. Cancer Res (1967) 39.90
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol (1986) 36.06
Amino acid difference formula to help explain protein evolution. Science (1974) 15.19
DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics (1999) 14.86
Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics (2000) 14.84
Statistical methods for detecting molecular adaptation. Trends Ecol Evol (2000) 10.10
Statistical tests for detecting gene conversion. Mol Biol Evol (1989) 9.86
Mutation rates among RNA viruses. Proc Natl Acad Sci U S A (1999) 6.37
Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants. Proc Natl Acad Sci U S A (1999) 5.82
Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences. Mol Biol Evol (1998) 2.36
Variability and genetic structure of plant virus populations. Annu Rev Phytopathol (2001) 2.18
Mechanisms of plant virus evolution. Annu Rev Phytopathol (1997) 1.83
The rate and character of spontaneous mutation in an RNA virus. Genetics (2002) 1.79
Three distinct mechanisms facilitate genetic isolation of sympatric wheat streak mosaic virus lineages. Virology (2001) 1.45
Sequence analysis of Potato leafroll virus isolates reveals genetic stability, major evolutionary events and differential selection pressure between overlapping reading frame products. J Gen Virol (2002) 1.36
Evolutionary history of Cucumber mosaic virus deduced by phylogenetic analyses. J Virol (2002) 1.26
The phylogeny of Turnip mosaic virus; comparisons of 38 genomic sequences reveal a Eurasian origin and a recent 'emergence' in east Asia. Mol Ecol (2003) 1.13
Expression of the rice yellow mottle virus P1 protein in vitro and in vivo and its involvement in virus spread. Virology (1998) 1.10
Nucleotide sequence comparisons of turnip yellow mosaic virus isolates from Australia and Europe. Arch Virol (1987) 1.08
Synthesis of an infectious full-length cDNA clone of rice yellow mottle virus and mutagenesis of the coat protein. Virology (1995) 1.01
Nucleotide sequence and genome characterization of rice yellow mottle virus RNA. J Gen Virol (1994) 0.99
Sobemoviruses. J Virol (2000) 0.96
Phylogeography of Rice yellow mottle virus in Africa. J Gen Virol (2003) 0.95
Molecular variability of geographically distinct isolates of Rice yellow mottle virus in Africa. Arch Virol (2000) 0.94
Comparison of molecular and immunological typing of isolates of Rice yellow mottle virus. Arch Virol (2002) 0.88
Characterization of rice yellow mottle virus isolates in Sudano-Sahelian areas. Arch Virol (1997) 0.83
Molecular epidemiology of the RNA satellite of Rice yellow mottle virus in Africa. Arch Virol (2003) 0.82
Classification of papillomaviruses. Virology (2004) 14.16
The Cassava Genome: Current Progress, Future Directions. Trop Plant Biol (2012) 1.75
The cassava (Manihot esculenta Crantz) root proteome: protein identification and differential expression. Proteomics (2006) 1.44
The BioCassava plus program: biofortification of cassava for sub-Saharan Africa. Annu Rev Plant Biol (2011) 1.40
A protein key to plant virus transmission at the tip of the insect vector stylet. Proc Natl Acad Sci U S A (2007) 1.29
Molecular and pathotypic characterization of new Xanthomonas oryzae strains from West Africa. Mol Plant Microbe Interact (2007) 1.19
Intracellular distribution of viral gene products regulates a complex mechanism of cauliflower mosaic virus acquisition by its aphid vector. Proc Natl Acad Sci U S A (2002) 1.10
Mutations in the eIF(iso)4G translation initiation factor confer high resistance of rice to Rice yellow mottle virus. Plant J (2006) 1.05
Diversification of rice yellow mottle virus and related viruses spans the history of agriculture from the neolithic to the present. PLoS Pathog (2008) 1.03
Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice. BMC Plant Biol (2008) 1.02
The Arabidopsis AtNPR1 inversely modulates defense responses against fungal, bacterial, or viral pathogens while conferring hypersensitivity to abiotic stresses in transgenic rice. Mol Plant Microbe Interact (2008) 1.01
Molecular diversity of Rice grassy stunt virus in Vietnam. Virus Genes (2012) 1.00
Where next for genome sequencing? Science (2006) 0.95
Phylogeography of Rice yellow mottle virus in Africa. J Gen Virol (2003) 0.95
Evolution of virulence in emerging epidemics. PLoS Pathog (2013) 0.94
Direct interaction between the Rice yellow mottle virus (RYMV) VPg and the central domain of the rice eIF(iso)4G1 factor correlates with rice susceptibility and RYMV virulence. Mol Plant Microbe Interact (2010) 0.92
High prevalence of Beijing and EAI4-VNM genotypes among M. tuberculosis isolates in northern Vietnam: sampling effect, rural and urban disparities. PLoS One (2012) 0.92
The rice yellow mottle virus P1 protein exhibits dual functions to suppress and activate gene silencing. Plant J (2009) 0.91
The distribution of mutational fitness effects of phage φX174 on different hosts. Evolution (2012) 0.90
Host nutrition alters the variance in parasite transmission potential. Biol Lett (2013) 0.89
Proteome analysis of plant-virus interactome: comprehensive data for virus multiplication inside their hosts. Mol Cell Proteomics (2006) 0.89
Population proteomics: an emerging discipline to study metapopulation ecology. Proteomics (2006) 0.89
Climatic-driven seasonality of emerging dengue fever in Hanoi, Vietnam. BMC Public Health (2014) 0.89
Theme and variations in the evolutionary pathways to virulence of an RNA plant virus species. PLoS Pathog (2007) 0.88
Proteome analysis of cultivar-specific deregulations of Oryza sativa indica and O. sativa japonica cellular suspensions undergoing rice yellow mottle virus infection. Proteomics (2004) 0.88
A single amino acid position in the helper component of cauliflower mosaic virus can change the spectrum of transmitting vector species. J Virol (2005) 0.88
Evolution of African cassava mosaic virus by recombination between bipartite and monopartite begomoviruses. Virol J (2012) 0.86
Historical contingencies modulate the adaptability of Rice yellow mottle virus. PLoS Pathog (2012) 0.86
Identification of a second major resistance gene to Rice yellow mottle virus, RYMV2, in the African cultivated rice species, O. glaberrima. Theor Appl Genet (2010) 0.85
Protein-RNA linkage and post-translational modifications of two sobemovirus VPgs. J Gen Virol (2010) 0.84
Molecular diversity of cotton leaf curl Gezira virus isolates and their satellite DNAs associated with okra leaf curl disease in Burkina Faso. Virol J (2010) 0.84
The adaptation of Rice yellow mottle virus to the eIF(iso)4G-mediated rice resistance. Virology (2010) 0.84
Splicing of Cauliflower mosaic virus 35S RNA serves to downregulate a toxic gene product. J Gen Virol (2004) 0.82
Multigenic families and proteomics: extended protein characterization as a tool for paralog gene identification. Proteomics (2005) 0.82
Cultural diversity, economic development and societal instability. PLoS One (2007) 0.82
Stability of rice yellow mottle virus and cellular compartmentalization during the infection process in Oryza sativa (L.). Virology (2002) 0.81
Sex-specific correlation between heterozygosity and clone size in the trematode Schistosoma mansoni. Mol Ecol (2004) 0.81
Genetic diversity and population structure of Mycobacterium marinum: new insights into host and environmental specificities. J Clin Microbiol (2012) 0.80
Genetic diversity and silencing suppression effects of Rice yellow mottle virus and the P1 protein. Virol J (2008) 0.78
Host resistance, population structure and the long-term persistence of bubonic plague: contributions of a modelling approach in the Malagasy focus. PLoS Comput Biol (2013) 0.78
Biological and molecular characterization of a putative new sobemovirus infecting Imperata cylindrica and maize in Africa. Arch Virol (2008) 0.78
The RYMV-encoded viral suppressor of RNA silencing P1 is a zinc-binding protein with redox-dependent flexibility. J Mol Biol (2013) 0.76
Sites under positive selection modulate the RNA silencing suppressor activity of rice yellow mottle virus movement protein P1. J Gen Virol (2013) 0.76
Internal point mutations of the capsid modify the serotype of Rice yellow mottle virus. J Virol (2005) 0.75
Rice yellow mottle virus stress responsive genes from susceptible and tolerant rice genotypes. BMC Plant Biol (2008) 0.75
The niche reduction approach: an opportunity for optimal control of infectious diseases in low-income countries? BMC Public Health (2014) 0.75
Alternative mutational pathways, outside the VPg, of rice yellow mottle virus to overcome eIF(iso)4G-mediated rice resistance under strong genetic constraints. J Gen Virol (2013) 0.75
Rocking the curve. Trends Microbiol (2004) 0.75
Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity. Emerg Infect Dis (2020) 0.75
clonality V.0.4: a randomization-based program to test for heterozygosity-genet size relationships in clonal organisms. Mol Ecol Resour (2008) 0.75
Molecular and biological characterization of pepper yellow vein Mali virus (PepYVMV) isolates associated with pepper yellow vein disease in Burkina Faso. Arch Virol (2010) 0.75