Published in Curr Opin Microbiol on October 01, 2004
Bioinformatics for whole-genome shotgun sequencing of microbial communities. PLoS Comput Biol (2005) 3.39
Dirichlet multinomial mixtures: generative models for microbial metagenomics. PLoS One (2012) 2.16
Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. PLoS One (2010) 1.85
Isolation and characterization of a novel lipase from a metagenomic library of tidal flat sediments: evidence for a new family of bacterial lipases. Appl Environ Microbiol (2006) 1.46
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Biotechnological uses of enzymes from psychrophiles. Microb Biotechnol (2011) 1.14
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Picoeukaryotic sequences in the Sargasso sea metagenome. Genome Biol (2008) 0.99
Diversity of culturable bacteria including Pantoea in wild mosquito Aedes albopictus. BMC Microbiol (2013) 0.99
Finding the needles in the metagenome haystack. Microb Ecol (2007) 0.98
Bioinformatics for the Human Microbiome Project. PLoS Comput Biol (2012) 0.97
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New extremophilic lipases and esterases from metagenomics. Curr Protein Pept Sci (2014) 0.96
Identification of a new gene encoding EPSPs with high glyphosate resistance from the metagenomic library. Curr Microbiol (2007) 0.92
Biochemical and kinetic characterization of GH43 β-D-xylosidase/α-L-arabinofuranosidase and GH30 α-L-arabinofuranosidase/β-D -xylosidase from rumen metagenome. J Ind Microbiol Biotechnol (2011) 0.89
Molecular approaches: advantages and artifacts in assessing bacterial diversity. J Ind Microbiol Biotechnol (2007) 0.88
Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes. Appl Environ Microbiol (2015) 0.86
Metagenome-scale analysis yields insights into the structure and function of microbial communities in a copper bioleaching heap. BMC Genet (2016) 0.83
Antibiotic resistance determinants in the interplay between food and gut microbiota. Genes Nutr (2011) 0.83
Adaptation of cells to new environments. Wiley Interdiscip Rev Syst Biol Med (2010) 0.82
A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences. BMC Genomics (2012) 0.82
Phylogenetic screening of a bacterial, metagenomic library using homing endonuclease restriction and marker insertion. Nucleic Acids Res (2009) 0.82
Metagenomics: Future of microbial gene mining. Indian J Microbiol (2008) 0.81
Metagenome survey of a multispecies and alga-associated biofilm revealed key elements of bacterial-algal interactions in photobioreactors. Appl Environ Microbiol (2013) 0.80
Marine Metagenome as A Resource for Novel Enzymes. Genomics Proteomics Bioinformatics (2015) 0.79
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Identification and characterization of a novel cold-adapted esterase from a metagenomic library of mountain soil. J Ind Microbiol Biotechnol (2012) 0.78
Novel lipolytic enzymes identified from metagenomic library of deep-sea sediment. Evid Based Complement Alternat Med (2011) 0.78
Characterization of a cold-active and salt tolerant esterase identified by functional screening of Arctic metagenomic libraries. BMC Biochem (2016) 0.78
Functional screening of antibiotic resistance genes from a representative metagenomic library of food fermenting microbiota. Biomed Res Int (2014) 0.77
Diversity of microorganisms isolated from the soil sample surround Chroogomphus rutilus in the Beijing region. Int J Biol Sci (2011) 0.77
Interaction networks for identifying coupled molecular processes in microbial communities. BioData Min (2015) 0.76
Cloning, expression, purification and preliminary X-ray analysis of a putative metagenome-derived lipase. Acta Crystallogr Sect F Struct Biol Cryst Commun (2012) 0.75
Metagenomic discovery of novel enzymes and biosurfactants in a slaughterhouse biofilm microbial community. Sci Rep (2016) 0.75
Novel Rhizosphere Soil Alleles for the Enzyme 1-Aminocyclopropane-1-Carboxylate Deaminase Queried for Function with an In Vivo Competition Assay. Appl Environ Microbiol (2015) 0.75
Current Advances on Virus Discovery and Diagnostic Role of Viral Metagenomics in Aquatic Organisms. Front Microbiol (2017) 0.75
Evaluating techniques for metagenome annotation using simulated sequence data. FEMS Microbiol Ecol (2016) 0.75
Characterization of Uncultured Genome Fragment from Soil Metagenomic Library Exposed Rare Mismatch of Internal Tetranucleotide Frequency. Front Microbiol (2016) 0.75
Use of Metagenomics and Isolation of Actinobacteria in Brazil's Atlantic Rainforest Soil for Antimicrobial Prospecting. ISRN Biotechnol (2014) 0.75
Purification, crystallization and preliminary crystallographic analysis of Est-Y29: a novel oligomeric beta-lactamase. Acta Crystallogr Sect F Struct Biol Cryst Commun (2009) 0.75
Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts. Mar Drugs (2016) 0.75
Purification, crystallization and preliminary crystallographic analysis of Est25: a ketoprofen-specific hormone-sensitive lipase. Acta Crystallogr Sect F Struct Biol Cryst Commun (2007) 0.75
Diversity of Extremely Halophilic Archaeal and Bacterial Communities from Commercial Salts. Front Microbiol (2017) 0.75
The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea. J Mol Microbiol Biotechnol (2002) 3.53
Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems. Appl Environ Microbiol (2009) 2.07
Doubling of marine dinitrogen-fixation rates based on direct measurements. Nature (2012) 1.79
Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability. Proc Natl Acad Sci U S A (2009) 1.66
A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesis. J Mol Biol (2007) 1.24
Giant hydrogen sulfide plume in the oxygen minimum zone off Peru supports chemolithoautotrophy. PLoS One (2013) 1.05
A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of clustered regularly interspaced short palindromic repeats (crispr)-derived rnas (crrnas) in Haloferax volcanii. J Biol Chem (2014) 1.02
Small RNAs for defence and regulation in archaea. Extremophiles (2012) 0.99
Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities. Mol Genet Genomics (2006) 0.99
Characterization of GlnK1 from Methanosarcina mazei strain Gö1: complementation of an Escherichia coli glnK mutant strain by GlnK1. J Bacteriol (2002) 0.94
An archaeal sRNA targeting cis- and trans-encoded mRNAs via two distinct domains. Nucleic Acids Res (2012) 0.93
Unique mechanistic features of post-translational regulation of glutamine synthetase activity in Methanosarcina mazei strain Gö1 in response to nitrogen availability. Mol Microbiol (2005) 0.92
Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III. RNA Biol (2013) 0.90
Deletion of the archaeal histone in Methanosarcina mazei Gö1 results in reduced growth and genomic transcription. Mol Microbiol (2007) 0.90
Development of genetic methods and construction of a chromosomal glnK1 mutant in Methanosarcina mazei strain Gö1. Mol Genet Genomics (2005) 0.90
Effects of nitrogen and carbon sources on transcription of soluble methyltransferases in Methanosarcina mazei strain Go1. J Bacteriol (2005) 0.90
Metagenomic cellulases highly tolerant towards the presence of ionic liquids--linking thermostability and halotolerance. Appl Microbiol Biotechnol (2011) 0.87
Thioredoxin targets fundamental processes in a methane-producing archaeon, Methanocaldococcus jannaschii. Proc Natl Acad Sci U S A (2014) 0.86
Insights into the NrpR regulon in Methanosarcina mazei Gö1. Arch Microbiol (2008) 0.86
Functional organization of a single nif cluster in the mesophilic archaeon Methanosarcina mazei strain Gö1. Archaea (2002) 0.85
GlnK effects complex formation between NifA and NifL in Klebsiella pneumoniae. Eur J Biochem (2004) 0.84
NrpRII mediates contacts between NrpRI and general transcription factors in the archaeon Methanosarcina mazei Gö1. FEBS J (2010) 0.84
Oxygen control of nif gene expression in Klebsiella pneumoniae depends on NifL reduction at the cytoplasmic membrane by electrons derived from the reduced quinone pool. Eur J Biochem (2003) 0.83
Membrane association of Klebsiella pneumoniae NifL is affected by molecular oxygen and combined nitrogen. Arch Microbiol (2001) 0.82
Establishing a markerless genetic exchange system for Methanosarcina mazei strain Gö1 for constructing chromosomal mutants of small RNA genes. Archaea (2011) 0.81
Novel reporter for identification of interference with acyl homoserine lactone and autoinducer-2 quorum sensing. Appl Environ Microbiol (2015) 0.81
Ferredoxin:thioredoxin reductase (FTR) links the regulation of oxygenic photosynthesis to deeply rooted bacteria. Planta (2012) 0.80
Regulatory RNAs in archaea: first target identification in Methanoarchaea. Biochem Soc Trans (2013) 0.80
Connection between multimetal(loid) methylation in methanoarchaea and central intermediates of methanogenesis. Appl Environ Microbiol (2011) 0.79
Biochemical studies of Klebsiella pneumoniae NifL reduction using reconstituted partial anaerobic respiratory chains of Wolinella succinogenes. J Biol Chem (2007) 0.78
Biology, biochemistry and the molecular machinery of Archaea. Curr Opin Microbiol (2005) 0.78
Health- and disease-associated species clusters in complex natural biofilms determine the innate immune response in oral epithelial cells during biofilm maturation. FEMS Microbiol Lett (2014) 0.77
The inhibitory form of NifL from Klebsiella pneumoniae exhibits ATP hydrolyzing activity only when synthesized under nitrogen sufficiency. Biochim Biophys Acta (2002) 0.76
Dynamic changes of the luminal and mucosa-associated gut microbiota during and after antibiotic therapy with paromomycin. Gut Microbes (2015) 0.76
Insights into membrane association of Klebsiella pneumoniae NifL under nitrogen-fixing conditions from mutational analysis. J Bacteriol (2010) 0.75
Towards understanding the nitrogen signal transduction for nif gene expression in Klebsiella pneumoniae. FEBS J (2008) 0.75
The transcriptional activator NrpA is crucial for inducing nitrogen fixation in Methanosarcina mazei Gö1 under nitrogen-limited conditions. FEBS J (2014) 0.75