Published in J Bacteriol on November 01, 2004
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PdhR (pyruvate dehydrogenase complex regulator) controls the respiratory electron transport system in Escherichia coli. J Bacteriol (2007) 1.39
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Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade. J Bacteriol (2007) 1.14
Mutations in two global regulators lower individual mortality in Escherichia coli. Mol Microbiol (2007) 1.11
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Stimulatory effect of trehalose on formation and activity of Escherichia coli RNA polymerase E sigma38 holoenzyme. J Bacteriol (1997) 0.88
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli. J Biol Chem (2004) 3.13
Unique multipotent cells in adult human mesenchymal cell populations. Proc Natl Acad Sci U S A (2010) 2.27
Identification and molecular characterization of the Mg2+ stimulon of Escherichia coli. J Bacteriol (2003) 2.06
Transcriptional response of Escherichia coli to external copper. Mol Microbiol (2005) 1.99
A regulatory trade-off as a source of strain variation in the species Escherichia coli. J Bacteriol (2004) 1.89
The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions. Nucleic Acids Res (2008) 1.89
Systematic search for zinc-binding proteins in Escherichia coli. Eur J Biochem (2002) 1.71
Minimum molecular architectures for transcription and replication of the influenza virus. Proc Natl Acad Sci U S A (2002) 1.70
Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two-component system sensing external magnesium availability. Mol Microbiol (2002) 1.64
Fundamental structural units of the Escherichia coli nucleoid revealed by atomic force microscopy. Nucleic Acids Res (2004) 1.56
Characterization of copper-inducible promoters regulated by CpxA/CpxR in Escherichia coli. Biosci Biotechnol Biochem (2006) 1.47
Systematic search for the Cra-binding promoters using genomic SELEX system. Genes Cells (2005) 1.44
A unifying model for the role of polyamines in bacterial cell growth, the polyamine modulon. J Biol Chem (2004) 1.44
RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines. Mol Microbiol (2007) 1.43
Two different modes of transcription repression of the Escherichia coli acetate operon by IclR. Mol Microbiol (2003) 1.40
PdhR (pyruvate dehydrogenase complex regulator) controls the respiratory electron transport system in Escherichia coli. J Bacteriol (2007) 1.39
Formation of a carboxy-terminal domain phosphatase (Fcp1)/TFIIF/RNA polymerase II (pol II) complex in Schizosaccharomyces pombe involves direct interaction between Fcp1 and the Rpb4 subunit of pol II. Mol Cell Biol (2002) 1.33
Novel roles of cAMP receptor protein (CRP) in regulation of transport and metabolism of carbon sources. PLoS One (2011) 1.32
Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase. Mol Microbiol (2002) 1.29
Role of the biofilm master regulator CsgD in cross-regulation between biofilm formation and flagellar synthesis. J Bacteriol (2011) 1.27
Rpb7 subunit of RNA polymerase II interacts with an RNA-binding protein involved in processing of transcripts. Nucleic Acids Res (2003) 1.23
Signal transduction cascade between EvgA/EvgS and PhoP/PhoQ two-component systems of Escherichia coli. J Bacteriol (2004) 1.22
Transcriptional regulation of drug efflux genes by EvgAS, a two-component system in Escherichia coli. Microbiology (2003) 1.21
Regulation of the Escherichia coli csgD promoter: interplay between five transcription factors. Microbiology (2010) 1.21
Transcriptional response of Escherichia coli to external zinc. J Bacteriol (2005) 1.20
Therapeutic priority of the PI3K/AKT/mTOR pathway in small cell lung cancers as revealed by a comprehensive genomic analysis. J Thorac Oncol (2014) 1.19
Novel members of the Cra regulon involved in carbon metabolism in Escherichia coli. J Bacteriol (2010) 1.19
Complete nucleotide sequence of plasmid Rts1: implications for evolution of large plasmid genomes. J Bacteriol (2002) 1.18
Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade. J Bacteriol (2007) 1.14
Host factor Ebp1: selective inhibitor of influenza virus transcriptase. Genes Cells (2007) 1.11
Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS. Mol Microbiol (2011) 1.07
Role of the C-terminal domain of the alpha subunit of RNA polymerase in LuxR-dependent transcriptional activation of the lux operon during quorum sensing. J Bacteriol (2002) 1.07
Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli. Mol Microbiol (2004) 1.07
Mapping sigma 54-RNA polymerase interactions at the -24 consensus promoter element. J Biol Chem (2003) 1.04
The uncharacterized transcription factor YdhM is the regulator of the nemA gene, encoding N-ethylmaleimide reductase. J Bacteriol (2008) 1.04
Growth phase-coupled alterations in cell structure and function of Escherichia coli. J Bacteriol (2003) 1.01
Isolation and characterization of inhibitors of the essential histidine kinase, YycG in Bacillus subtilis and Staphylococcus aureus. J Antibiot (Tokyo) (2003) 0.99
Polyamines enhance synthesis of the RNA polymerase sigma 38 subunit by suppression of an amber termination codon in the open reading frame. J Biol Chem (2002) 0.99
Human umbilical cord-derived mesenchymal stromal cells differentiate into functional Schwann cells that sustain peripheral nerve regeneration. J Neuropathol Exp Neurol (2010) 0.98
Dynamic state of DNA topology is essential for genome condensation in bacteria. EMBO J (2006) 0.98
Involvement of the leucine response transcription factor LeuO in regulation of the genes for sulfa drug efflux. J Bacteriol (2009) 0.98
Epidermal growth factor receptor (EGFR) signaling regulates global metabolic pathways in EGFR-mutated lung adenocarcinoma. J Biol Chem (2014) 0.96
Involvement of region 4 of the sigma70 subunit of RNA polymerase in transcriptional activation of the lux operon during quorum sensing. FEMS Microbiol Lett (2003) 0.96
A novel nucleoid protein of Escherichia coli induced under anaerobiotic growth conditions. Nucleic Acids Res (2010) 0.96
Level of the RNA polymerase II in the fission yeast stays constant but phosphorylation of its carboxyl terminal domain varies depending on the phase and rate of cell growth. Genes Cells (2002) 0.96
Involvement of multiple transcription factors for metal-induced spy gene expression in Escherichia coli. J Biotechnol (2007) 0.96
Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coli. FEMS Microbiol Lett (2010) 0.95
Involvement of RNA-binding protein Hfq in the post-transcriptional regulation of invE gene expression in Shigella sonnei. J Biol Chem (2007) 0.95
The role of the omega subunit of RNA polymerase in expression of the relA gene in Escherichia coli. FEMS Microbiol Lett (2007) 0.94
M. tuberculosis intramembrane protease Rip1 controls transcription through three anti-sigma factor substrates. Mol Microbiol (2010) 0.94
The Escherichia coli K-12 MntR miniregulon includes dps, which encodes the major stationary-phase DNA-binding protein. J Bacteriol (2011) 0.93
Identification of a lung adenocarcinoma cell line with CCDC6-RET fusion gene and the effect of RET inhibitors in vitro and in vivo. Cancer Sci (2013) 0.93
Polymerase chain reaction detection of bacterial 16S rRNA gene in human blood. Microbiol Immunol (2008) 0.93
Enhancement of the synthesis of RpoN, Cra, and H-NS by polyamines at the level of translation in Escherichia coli cultured with glucose and glutamate. J Bacteriol (2007) 0.93
Enhancement of +1 frameshift by polyamines during translation of polypeptide release factor 2 in Escherichia coli. J Biol Chem (2006) 0.92
In vitro properties of RpoS (sigma(S)) mutants of Escherichia coli with postulated N-terminal subregion 1.1 or C-terminal region 4 deleted. J Bacteriol (2003) 0.91
Anaerobic regulation of citrate fermentation by CitAB in Escherichia coli. Biosci Biotechnol Biochem (2008) 0.91
Principles and methods of affinity cleavage in studying transcription. Methods Enzymol (2003) 0.90
Novel regulation targets of the metal-response BasS-BasR two-component system of Escherichia coli. Microbiology (2012) 0.89
Involvement of RNA-binding protein Hfq in the osmotic-response regulation of invE gene expression in Shigella sonnei. BMC Microbiol (2009) 0.89
Participation of regulator AscG of the beta-glucoside utilization operon in regulation of the propionate catabolism operon. J Bacteriol (2009) 0.89
Enhanced biofilm formation and/or cell viability by polyamines through stimulation of response regulators UvrY and CpxR in the two-component signal transducing systems, and ribosome recycling factor. Int J Biochem Cell Biol (2012) 0.87
Enhancement of the synthesis of RpoE and StpA by polyamines at the level of translation in escherichia coli under heat shock conditions. J Bacteriol (2009) 0.87
The transcription regulator AllR senses both allantoin and glyoxylate and controls a set of genes for degradation and reutilization of purines. Microbiology (2008) 0.86
Suppression of spontaneous and hydrogen peroxide-induced mutations by a MutT-type nucleotide pool sanitization enzyme, the Escherichia coli Orf135 protein. Genes Cells (2003) 0.86
The interaction between sigmaS, the stationary phase sigma factor, and the core enzyme of Escherichia coli RNA polymerase. Genes Cells (2002) 0.86
Tfg3, a subunit of the general transcription factor TFIIF in Schizosaccharomyces pombe, functions under stress conditions. Nucleic Acids Res (2004) 0.86
Glyceraldehyde-3-phosphate dehydrogenase and actin associate with RNA polymerase II and interact with its Rpb7 subunit. FEBS Lett (2005) 0.85
Negative regulation of DNA repair gene (ung) expression by the CpxR/CpxA two-component system in Escherichia coli K-12 and induction of mutations by increased expression of CpxR. J Bacteriol (2004) 0.85
Recruitment of sigma54-RNA polymerase to the Pu promoter of Pseudomonas putida through integration host factor-mediated positioning switch of alpha subunit carboxyl-terminal domain on an UP-like element. J Biol Chem (2003) 0.85
folA, a new member of the TyrR regulon in Escherichia coli K-12. J Bacteriol (2007) 0.85
The fission yeast RPA51 is a functional homolog of the budding yeast A49 subunit of RNA polymerase I and required for maximizing transcription of ribosomal DNA. Genes Genet Syst (2003) 0.85
Involvement of the ribose operon repressor RbsR in regulation of purine nucleotide synthesis in Escherichia coli. FEMS Microbiol Lett (2013) 0.85
Characterization of CitA-CitB signal transduction activating genes involved in anaerobic citrate catabolism in Escherichia coli. Biosci Biotechnol Biochem (2009) 0.84
RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion system. EMBO Rep (2011) 0.84
Studies of Schizosaccharomyces pombe TFIIE indicate conformational and functional changes in RNA polymerase II at transcription initiation. Genes Cells (2005) 0.83
Repression of flagellar genes in exponential phase by CsgD and CpxR, two crucial modulators of Escherichia coli biofilm formation. J Bacteriol (2013) 0.83
Identification of histone H4-like TAF in Schizosaccharomyces pombe as a protein that interacts with WD repeat-containing TAF. Nucleic Acids Res (2002) 0.83
The nucleoid-associated protein Dan organizes chromosomal DNA through rigid nucleoprotein filament formation in E. coli during anoxia. Nucleic Acids Res (2012) 0.83
Structure-function relationship of the influenza virus RNA polymerase: primer-binding site on the PB1 subunit. Biochemistry (2004) 0.83
Increase in cell viability by polyamines through stimulation of the synthesis of ppGpp regulatory protein and ω protein of RNA polymerase in Escherichia coli. Int J Biochem Cell Biol (2011) 0.82
Induction of the Escherichia coli cysK gene by genetic and environmental factors. FEMS Microbiol Lett (2011) 0.82
A novel regulator RcdA of the csgD gene encoding the master regulator of biofilm formation in Escherichia coli. Microbiologyopen (2012) 0.82
Decrease in cell viability in an RMF, sigma(38), and OmpC triple mutant of Escherichia coli. Biochem Biophys Res Commun (2002) 0.81
Involvement of cyclic AMP receptor protein in regulation of the rmf gene encoding the ribosome modulation factor in Escherichia coli. J Bacteriol (2013) 0.81
Behavior of sister copies of mini-F plasmid after synchronized plasmid replication in Escherichia coli cells. J Bacteriol (2002) 0.81
Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum. J Biosci Bioeng (2006) 0.81
Novel regulator PgrR for switch control of peptidoglycan recycling in Escherichia coli. Genes Cells (2013) 0.80
Syntheses and structure-activity relationships of nonnatural beta-C-nucleoside 5'-triphosphates bearing an aromatic nucleobase with phenolic hydroxy groups: inhibitory activities against DNA polymerases. J Med Chem (2002) 0.80
Ribosome modulation factor, an important protein for cell viability encoded by the polyamine modulon. J Biol Chem (2010) 0.80
Roles of cell division control factor SdiA: recognition of quorum sensing signals and modulation of transcription regulation targets. Genes Cells (2014) 0.80
RNA polymerase II transcription apparatus in Schizosaccharomyces pombe. Curr Genet (2003) 0.80
The fission yeast protein Ker1p is an ortholog of RNA polymerase I subunit A14 in Saccharomyces cerevisiae and is required for stable association of Rrn3p and RPA21 in RNA polymerase I. J Biol Chem (2005) 0.79
Identification of the set of genes, including nonannotated morA, under the direct control of ModE in Escherichia coli. J Bacteriol (2013) 0.79