Published in Dev Cell on March 01, 2005
Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes. Nat Genet (2008) 5.50
Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development. Nat Genet (2012) 2.94
Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells. PLoS Comput Biol (2006) 1.88
Sex-specific expression of alternative transcripts in Drosophila. Genome Biol (2006) 1.53
An integrated strategy for analyzing the unique developmental programs of different myoblast subtypes. PLoS Genet (2006) 1.51
Transcriptional control of stem cell maintenance in the Drosophila intestine. Development (2010) 1.48
The novel RASSF6 and RASSF10 candidate tumour suppressor genes are frequently epigenetically inactivated in childhood leukaemias. Mol Cancer (2009) 1.44
Single-cell mapping of neural and glial gene expression in the developing Drosophila CNS midline cells. Dev Biol (2006) 1.40
i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules. Nucleic Acids Res (2012) 1.24
Hox and senseless antagonism functions as a molecular switch to regulate EGF secretion in the Drosophila PNS. Dev Cell (2008) 1.23
Context dependence of proneural bHLH proteins. Curr Opin Genet Dev (2008) 1.21
N-terminal RASSF family: RASSF7-RASSF10. Epigenetics (2011) 1.17
Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification. PLoS Biol (2010) 1.13
A machine learning approach for identifying novel cell type-specific transcriptional regulators of myogenesis. PLoS Genet (2012) 1.10
An NRSF/REST-like repressor downstream of Ebi/SMRTER/Su(H) regulates eye development in Drosophila. EMBO J (2006) 1.10
Frequent unanticipated alleles of lethal giant larvae in Drosophila second chromosome stocks. Genetics (2009) 1.05
The gene regulatory cascade linking proneural specification with differentiation in Drosophila sensory neurons. PLoS Biol (2011) 1.04
The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors. Genes Dev (2013) 1.00
Toward a systems-level understanding of developmental regulatory networks. Curr Opin Genet Dev (2008) 0.99
In vivo neuronal subtype-specific targets of Atoh1 (Math1) in dorsal spinal cord. J Neurosci (2011) 0.98
Enteroendocrine cells support intestinal stem-cell-mediated homeostasis in Drosophila. Cell Rep (2014) 0.97
cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers. Genome Biol (2007) 0.97
Complex interplay of three transcription factors in controlling the tormogen differentiation program of Drosophila mechanoreceptors. Dev Biol (2009) 0.96
Genome-wide identification of cis-regulatory motifs and modules underlying gene coregulation using statistics and phylogeny. Proc Natl Acad Sci U S A (2010) 0.92
A robust cell cycle control mechanism limits E2F-induced proliferation of terminally differentiated cells in vivo. J Cell Biol (2010) 0.92
Insensitive is a corepressor for Suppressor of Hairless and regulates Notch signalling during neural development. EMBO J (2011) 0.91
Notch regulates numb: integration of conditional and autonomous cell fate specification. Development (2010) 0.86
Laser capture microdissection of Drosophila peripheral neurons. J Vis Exp (2010) 0.86
cisMEP: an integrated repository of genomic epigenetic profiles and cis-regulatory modules in Drosophila. BMC Syst Biol (2014) 0.85
Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers. BMC Genomics (2008) 0.84
reduced ocelli encodes the leucine rich repeat protein Pray For Elves in Drosophila melanogaster. Fly (Austin) (2007) 0.83
Enhancer diversity and the control of a simple pattern of Drosophila CNS midline cell expression. Dev Biol (2014) 0.81
Essential roles of Da transactivation domains in neurogenesis and in E(spl)-mediated repression. Mol Cell Biol (2012) 0.79
Neural precursor-specific expression of multiple Drosophila genes is driven by dual enhancer modules with overlapping function. Proc Natl Acad Sci U S A (2014) 0.79
How Drosophila melanogaster Forms its Mechanoreceptors. Curr Genomics (2008) 0.79
Common and distinct DNA-binding and regulatory activities of the BEN-solo transcription factor family. Genes Dev (2015) 0.78
LOESS correction for length variation in gene set-based genomic sequence analysis. Bioinformatics (2012) 0.78
Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. PLoS One (2010) 0.78
Genes implicated in stem cell identity and temporal programme are directly targeted by Notch in neuroblast tumours. Development (2015) 0.77
Linking specification to differentiation: From proneural genes to the regulation of ciliogenesis. Fly (Austin) (2011) 0.76
The CSL proteins, versatile transcription factors and context dependent corepressors of the notch signaling pathway. Cell Div (2016) 0.75
Gene expression profiling identifies the zinc-finger protein Charlatan as a regulator of intestinal stem cells in Drosophila. Development (2014) 0.75
The MYST-containing protein Chameau is required for proper sensory organ specification during Drosophila thorax morphogenesis. PLoS One (2012) 0.75
Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (2010) 12.39
A cis-regulatory map of the Drosophila genome. Nature (2011) 4.80
KCNQ potassium channel mutations cause cardiac arrhythmias in Drosophila that mimic the effects of aging. Proc Natl Acad Sci U S A (2007) 3.30
New Drosophila transgenic reporters: insulated P-element vectors expressing fast-maturing RFP. Biotechniques (2004) 2.82
Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling. Genes Dev (2002) 2.77
SCORE: a computational approach to the identification of cis-regulatory modules and target genes in whole-genome sequence data. Site clustering over random expectation. Proc Natl Acad Sci U S A (2002) 2.51
Default repression and Notch signaling: Hairless acts as an adaptor to recruit the corepressors Groucho and dCtBP to Suppressor of Hairless. Genes Dev (2002) 1.87
Experimental selection of hypoxia-tolerant Drosophila melanogaster. Proc Natl Acad Sci U S A (2011) 1.60
Lateral inhibition in proneural clusters: cis-regulatory logic and default repression by Suppressor of Hairless. Development (2005) 1.41
GenePalette: a universal software tool for genome sequence visualization and analysis. Dev Biol (2004) 1.35
Upd/Jak/STAT signaling represses wg transcription to allow initiation of morphogenetic furrow in Drosophila eye development. Dev Biol (2007) 0.97
Complex interplay of three transcription factors in controlling the tormogen differentiation program of Drosophila mechanoreceptors. Dev Biol (2009) 0.96
Role of architecture in the function and specificity of two Notch-regulated transcriptional enhancer modules. PLoS Genet (2012) 0.90
An ancient transcriptional regulatory linkage. Dev Biol (2005) 0.88
Notch regulates numb: integration of conditional and autonomous cell fate specification. Development (2010) 0.86
Identification of hunchback cis-regulatory DNA conferring temporal expression in neuroblasts and neurons. Gene Expr Patterns (2011) 0.85
Ancestral and conserved cis-regulatory architectures in developmental control genes. Dev Biol (2011) 0.84
Both inhibition and activation of Notch signaling rely on a conserved Neuralized-binding motif in Bearded proteins and the Notch ligand Delta. Dev Biol (2009) 0.84