Published in Hum Hered on January 01, 2004
Efficient selection of tagging single-nucleotide polymorphisms in multiple populations. Hum Genet (2006) 1.66
The oxytocin receptor (OXTR) contributes to prosocial fund allocations in the dictator game and the social value orientations task. PLoS One (2009) 1.58
Snagger: a user-friendly program for incorporating additional information for tagSNP selection. BMC Bioinformatics (2008) 1.35
Genetically indistinguishable SNPs and their influence on inferring the location of disease-associated variants. Genome Res (2005) 1.25
Intra- and interpopulation genotype reconstruction from tagging SNPs. Genome Res (2006) 1.21
Polymorphisms in toll-like receptor 4 and toll-like receptor 9 influence viral load in a seroincident cohort of HIV-1-infected individuals. AIDS (2009) 1.20
PPARG and ADIPOQ gene polymorphisms increase type 2 diabetes mellitus risk in Asian Indian Sikhs: Pro12Ala still remains as the strongest predictor. Metabolism (2009) 1.10
A model-based approach to selection of tag SNPs. BMC Bioinformatics (2006) 0.92
The utility of low-density genotyping for imputation in the Thoroughbred horse. Genet Sel Evol (2014) 0.90
Genetic variation in cholesterol ester transfer protein, serum CETP activity, and coronary artery disease risk in Asian Indian diabetic cohort. Pharmacogenet Genomics (2012) 0.90
Polymorphisms in genes of interleukin 12 and its receptors and their association with protection against severe malarial anaemia in children in western Kenya. Malar J (2010) 0.82
Genetic association studies: an information content perspective. Curr Genomics (2012) 0.81
Autophagy-related IRGM genes confer susceptibility to ankylosing spondylitis in a Chinese female population: a case-control study. Genes Immun (2016) 0.75
Simple SNP-based minimal marker genotyping for Humulus lupulus L. identification and variety validation. BMC Res Notes (2015) 0.75
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding. Genome Res (2009) 15.15
A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1. Nat Genet (2006) 15.14
A high-density admixture map for disease gene discovery in african americans. Am J Hum Genet (2004) 10.87
The genome of the sea urchin Strongylocentrotus purpuratus. Science (2006) 6.41
Development of personalized tumor biomarkers using massively parallel sequencing. Sci Transl Med (2010) 6.08
An Aboriginal Australian genome reveals separate human dispersals into Asia. Science (2011) 4.84
Ancestry informative marker sets for determining continental origin and admixture proportions in common populations in America. Hum Mutat (2009) 4.65
A second-generation combined linkage physical map of the human genome. Genome Res (2007) 3.60
The SNPlex genotyping system: a flexible and scalable platform for SNP genotyping. J Biomol Tech (2005) 2.64
Algorithmic strategies for the single nucleotide polymorphism haplotype assembly problem. Brief Bioinform (2002) 2.03
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biol (2014) 1.95
Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations. PLoS One (2010) 1.85
An ancestry informative marker set for determining continental origin: validation and extension using human genome diversity panels. BMC Genet (2009) 1.80
Population genetic inference from personal genome data: impact of ancestry and admixture on human genomic variation. Am J Hum Genet (2012) 1.75
Patterns of linkage disequilibrium in the MHC region on human chromosome 6p. Hum Genet (2004) 1.73
Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities. Mol Cancer Ther (2012) 1.72
The transcriptomes of two heritable cell types illuminate the circuit governing their differentiation. PLoS Genet (2010) 1.59
Gene and alternative splicing annotation with AIR. Genome Res (2005) 1.55
Identifying selected regions from heterozygosity and divergence using a light-coverage genomic dataset from two human populations. PLoS One (2008) 1.54
The transcriptome of the sea urchin embryo. Science (2006) 1.42
The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern. Genome Res (2005) 1.40
Robustness of inference of haplotype block structure. J Comput Biol (2003) 1.38
Joint variant and de novo mutation identification on pedigrees from high-throughput sequencing data. J Comput Biol (2014) 1.32
HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data. J Comput Biol (2012) 1.31
Optimal haplotype block-free selection of tagging SNPs for genome-wide association studies. Genome Res (2004) 1.28
Finding anchors for genomic sequence comparison. J Comput Biol (2005) 1.25
1001 optimal PDB structure alignments: integer programming methods for finding the maximum contact map overlap. J Comput Biol (2004) 1.23
Analyses of a set of 128 ancestry informative single-nucleotide polymorphisms in a global set of 119 population samples. Investig Genet (2011) 1.22
Global analysis of disease-related DNA sequence variation in 10 healthy individuals: implications for whole genome-based clinical diagnostics. Genet Med (2011) 1.15
Functional cis-regulatory genomics for systems biology. Proc Natl Acad Sci U S A (2010) 1.09
Evolution of yeast noncoding RNAs reveals an alternative mechanism for widespread intron loss. Science (2010) 1.08
dbPTB: a database for preterm birth. Database (Oxford) (2012) 1.05
Haplotype assembly in polyploid genomes and identical by descent shared tracts. Bioinformatics (2013) 1.05
Validation of the performance of a comprehensive genotyping assay panel of single nucleotide polymorphisms in drug metabolism enzyme genes. Hum Mutat (2008) 1.02
Pathway-based genetic analysis of preterm birth. Genomics (2013) 1.00
QColors: an algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing reads. In Silico Biol (2012) 0.98
Selection of minimum subsets of single nucleotide polymorphisms to capture haplotype block diversity. Pac Symp Biocomput (2003) 0.96
Intellectual disability is associated with increased runs of homozygosity in simplex autism. Am J Hum Genet (2013) 0.96
Mapping genes for common diseases: the case for genetic (LD) maps. Hum Hered (2004) 0.94
Haplotype phasing by multi-assembly of shared haplotypes: phase-dependent interactions between rare variants. Pac Symp Biocomput (2011) 0.93
Epitope prediction algorithms for peptide-based vaccine design. Proc IEEE Comput Soc Bioinform Conf (2003) 0.89
The Clark phaseable sample size problem: long-range phasing and loss of heterozygosity in GWAS. J Comput Biol (2011) 0.89
On the power to detect SNP/phenotype association in candidate quantitative trait loci genomic regions: a simulation study. Pac Symp Biocomput (2003) 0.88
Pathway-based analysis of genomic variation data. Curr Opin Genet Dev (2013) 0.87
A new expectation-maximization statistical test for case-control association studies considering rare variants obtained by high-throughput sequencing. Hum Hered (2011) 0.83
Islands of tractability for parsimony haplotyping. IEEE/ACM Trans Comput Biol Bioinform (2006) 0.80
A cost-effective statistical method to correct for differential genotype misclassification when performing case-control genetic association. Hum Hered (2010) 0.79
Global analysis of sequence diversity within HIV-1 subtypes across geographic regions. Future Virol (2012) 0.78
Tumor haplotype assembly algorithms for cancer genomics. Pac Symp Biocomput (2014) 0.75
DELISHUS: an efficient and exact algorithm for genome-wide detection of deletion polymorphism in autism. Bioinformatics (2012) 0.75
The imperfect ancestral recombination graph reconstruction problem: upper bounds for recombination and homoplasy. J Comput Biol (2010) 0.75
Islands of tractability for parsimony haplotyping. Proc IEEE Comput Syst Bioinform Conf (2005) 0.75
A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG). Bioinformatics (2009) 0.75